Dcan011158.2
Basic Information
- Insect
- Dexiosoma caninum
- Gene Symbol
- lrrfip2
- Assembly
- GCA_963924685.1
- Location
- OZ004726.1:91743776-91750091[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.51 7.6e+03 -3.4 0.6 251 290 28 72 12 81 0.53 2 4 0.49 7.3e+03 -3.3 1.6 33 209 205 227 185 272 0.45 3 4 1.2e-115 1.8e-111 372.9 27.8 1 299 311 607 311 608 0.93 4 4 0.11 1.6e+03 -1.2 3.5 214 245 631 661 610 681 0.55
Sequence Information
- Coding Sequence
- ATGGATTCAGCAAGTGCCGTAGGCCGACGTCGCGTTAATTCACGTGTCAATGCTGAAGATCAAGCTTTGGATCAAATAGCTAAAGAGGGCAAAAGTagtagcagcagcaacaactgcGCCAACAACAATGTTGATGTAGCAAACGATGAAATCATCGAAGAGTTGTTTGAATTTAGCGATACTGATTTAAAAGAACTCGacgatataaaaaacaaaaacgaaattgCCAACAGTGCCAACAATTCTACTAATATAAATCCAGATATTTTAACTGTAGGTAATCGTAAAATAAAAGGCAATGAACAGCTTGAAGCGGATTCGGAGttgaaattgcaaaatattacaataagtgataataacaaaaattataataatgatgtagaaaaaaaagaggTAGAACCACAACAGGTGGGAATAGAATCGTTATCGTCGTTGCCAATTGATAATATTGATAAACGGAACGAAGAGATAACAGAAGACAATGTATTAGTCACGACAATGACACCAACAACAGATAATATAATGAACGCCGAAGCAAATGGGTATAAAAGCGCAATTCATAAAAATCAGCAAGAAGTACAATCTTTCGTGTCAGAAGTAATCAACGCAAAAGAAGCTGACAAAGAATTTACTACTACTGCGGTACAAATCGCCAATAGTTCTATTGTTAGCGAGGAACAGCAATCATTGGGGTCTGCAAACGaacacaatgaaaacaaaatctcAACATCTTCAGACATAACGTCTGTAATTGGGATTAAAGAACCCAGTAGTTGCAGCAGAAAAGATGCCAACAATCTTGcaaataatgatgatgatgatggtggcgTTGGTGATAATGTTACGATTCATAATAATGTTTATGATGACGAGTGTAGTGAACCATATGATGAAGTTTTAGTGCAATTTCTAGATGAATCTAATCAGATTGCTGAGGCTAGATTAGCTGCTAGGAGGCATGCCAGAGCAGAAGCTCGTGAAATACGTATGCGAGAGTTAGAGCGCCAACAAAAGGAACAAGAATCTAATGCAGATCGTGTTTTCGATATGCATTCAACGGTAACGGGTATAACACCATTGTCACACATGCGTCTAGGCTTGGCAAGTTCACCAGCAACAGGTTTACTGATCTCGACAAGAAGCAACTCCATGTCATCGAGACGCAGCAGCGAAGATTCTTTGGAAGAAGAAGGCCGTAGTTTAAGGGATATACGCCATGAACTAAAAGATGTCGAAGAACGGTTTCGCAAGGCTATGATAGCAAATGCTCAGTTGGATAATGATCGTGCCGCACAAACCTATCAAATACAGTTGCTAAAAGACAAGCTGGAAGATATGGAAGAATCGTATTCACAATTACAGCGTGAATGTAAGGAAAAGACGCGCGACTGCAATGCCTTAAAACGATCGTTGGATAAATTAAGCGAAGAGCTTAAACTGGTACAGGGTCAGCTAAACGAGCGTGACACACTGATATCAGAACAAGGTTTAGTTATTGTGGCAATTGAAAATGAGGATGGCACTGATGCCAAGCGTGCTCTAGTCACTGTTGAAAATGCACAATTATTAGGTTCGGTACAAGGATCATTAGatgtcCGACTTAAGAAATTCAGCGAAGAAAAACATCAACTGCAATCTGAAGTTCAACATCTACAAGAACAGCTAGAAACGTATAAAAGTCAGGGCAAAGGTCGAGCTAAAGGCAATTCTTCGAACGGTCCTGTCGGTTCAGATGATGACGATTATGAAGCTCAAAGAGAAGCCAATAAAATCATAATGGATTATAAATATAAGTTACAGAAAGCTGAACAGGAAATTGCTAGTCTTCAATCAAGTTTAGCACGCTCGGAAACACAAGTTATACGTTATAAAAGTACAGCCGAGGCTGCTGAAAAAGCTGAGTCCGAACTTAAAATTGAACGAAGGAAACTGCAAAGAGagAATCGTGAGGCAATGGAAAAACTGGAAGAGTTGGAAACATCAAACAATCATCTACTGAAACGTTTCGACAAATTAAAGAATGCCAAAAGTGCTTTGTTAAAGGATCTCTGA
- Protein Sequence
- MDSASAVGRRRVNSRVNAEDQALDQIAKEGKSSSSSNNCANNNVDVANDEIIEELFEFSDTDLKELDDIKNKNEIANSANNSTNINPDILTVGNRKIKGNEQLEADSELKLQNITISDNNKNYNNDVEKKEVEPQQVGIESLSSLPIDNIDKRNEEITEDNVLVTTMTPTTDNIMNAEANGYKSAIHKNQQEVQSFVSEVINAKEADKEFTTTAVQIANSSIVSEEQQSLGSANEHNENKISTSSDITSVIGIKEPSSCSRKDANNLANNDDDDGGVGDNVTIHNNVYDDECSEPYDEVLVQFLDESNQIAEARLAARRHARAEAREIRMRELERQQKEQESNADRVFDMHSTVTGITPLSHMRLGLASSPATGLLISTRSNSMSSRRSSEDSLEEEGRSLRDIRHELKDVEERFRKAMIANAQLDNDRAAQTYQIQLLKDKLEDMEESYSQLQRECKEKTRDCNALKRSLDKLSEELKLVQGQLNERDTLISEQGLVIVAIENEDGTDAKRALVTVENAQLLGSVQGSLDVRLKKFSEEKHQLQSEVQHLQEQLETYKSQGKGRAKGNSSNGPVGSDDDDYEAQREANKIIMDYKYKLQKAEQEIASLQSSLARSETQVIRYKSTAEAAEKAESELKIERRKLQRENREAMEKLEELETSNNHLLKRFDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -