Dtru025887.1
Basic Information
- Insect
- Deroplatys truncata
- Gene Symbol
- lrrfip2
- Assembly
- GCA_030765065.1
- Location
- CM060978.1:113368495-113384631[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.4e-59 9.5e-55 188.9 19.7 1 138 6 142 6 147 0.91
Sequence Information
- Coding Sequence
- ATGTTCTTTTTGCAGGCAGAAGCTCGACTGGCTGCACGTCGACAAGCCAGAGCAGAGGCAAGAGAGATCCGTATGCGAGAGCTCGAACGTCAACAGAAGGAGAATGAGGAAAACCACGATTCTGTGTATGATATGTACAGTAGAGACACTCCAAGCCGTACTGCAAGAGTGGCTTCCACCATGAGGACTGCATCACACAGTGGTACCAACAGCTACCATTCAAGTCGGCGTAGTTCTGAAGACTCCTTAGAGGAAGGCATCAGCTTAAGGGATGTACGACAAGAACTGAAGGAAGTAGAGGAAAAGTTTCGCAAGGCAATGATTCAGAATGCTCAACTAGACAACGAAAAGTCCTCGCTCACTTATCAGGTGGAGTTGCTCAAAGACAGACTGGAAGACCTTGAGGAATCCCATGCACAGCTCCAGCTTTGCCGACTGGACAATCCTGGGCGGTGTTCGAGCTCAGTAGGCTTGCCTACTAGTGTGTCTCGCATCGTCAAACAGAACCTGGCCAGGCCTAGCAGATCATCCTTTCGGACCGGTTTAACAAATCCTACTCGATCGCTTGGAACCCCCTCACTCAGGGAACCGGTGCCATAA
- Protein Sequence
- MFFLQAEARLAARRQARAEAREIRMRELERQQKENEENHDSVYDMYSRDTPSRTARVASTMRTASHSGTNSYHSSRRSSEDSLEEGISLRDVRQELKEVEEKFRKAMIQNAQLDNEKSSLTYQVELLKDRLEDLEESHAQLQLCRLDNPGRCSSSVGLPTSVSRIVKQNLARPSRSSFRTGLTNPTRSLGTPSLREPVP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -