Dalb018586.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Dermolepida albohirtum
Gene Symbol
-
Assembly
GCA_031893035.1
Location
JAVIWB010003310.1:205604-220122[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 22 0.00091 0.17 13.5 1.1 2 23 185 207 184 207 0.96
2 22 0.026 4.8 8.9 0.5 1 20 332 351 332 353 0.95
3 22 5.6 1e+03 1.6 1.4 2 23 383 405 382 405 0.93
4 22 1.9 3.5e+02 3.0 0.1 5 20 414 429 412 431 0.93
5 22 0.66 1.2e+02 4.5 1.3 1 19 437 455 437 460 0.95
6 22 1.5e-06 0.00028 22.2 2.3 2 23 528 549 527 549 0.97
7 22 1.2e-06 0.00022 22.5 1.0 2 23 564 585 563 585 0.97
8 22 0.85 1.5e+02 4.2 0.1 2 23 593 615 592 615 0.92
9 22 0.00065 0.12 14.0 0.2 2 23 620 641 620 641 0.96
10 22 0.044 8 8.2 0.0 1 23 663 685 663 685 0.97
11 22 0.0098 1.8 10.3 3.3 1 23 708 730 708 731 0.95
12 22 0.0027 0.49 12.0 0.6 1 23 741 763 741 763 0.98
13 22 1.2e-06 0.00022 22.6 7.0 1 23 791 813 791 813 0.99
14 22 1.1 2e+02 3.8 2.3 3 23 835 855 833 855 0.96
15 22 0.013 2.3 9.9 0.4 1 23 879 901 879 901 0.97
16 22 0.053 9.6 8.0 0.1 2 23 915 937 914 937 0.94
17 22 0.00058 0.11 14.1 1.2 1 23 952 974 952 974 0.93
18 22 0.69 1.3e+02 4.4 0.3 1 23 1006 1029 1006 1029 0.93
19 22 0.0058 1.1 11.0 0.5 2 23 1040 1061 1039 1061 0.96
20 22 0.00026 0.048 15.2 2.9 1 23 1068 1091 1068 1091 0.95
21 22 6.7e-05 0.012 17.1 1.9 1 23 1099 1121 1099 1121 0.99
22 22 0.00025 0.046 15.2 0.6 1 23 1139 1162 1139 1162 0.98

Sequence Information

Coding Sequence
ATGGGAGAGGAAACATTTGGAAATTACAGCTCCTGTTGTCGATTGTGCTTATCGGATaagttcaacaatttgaaaCCAATATTTGAGGACGAAGCAGAAAGTCGAACATTGGTTCAAAAGATTCTTAATTTCATCGGTGTGGAGGTGTCaccaaatgataaaatttccaCAATGATTTGTAATCAGTGCCGATCAAAAGTGAATAATTGGGATGTATTTAAGGTCGAATGCAATAAAAATCAAACCAAATTACACGACTGGCTAAATAGTTGGAATGCTTCAACTGGAAACAATAATATAGGAAATGTGaccATCCATGTCAAAGATGAACCTGTAGACAGAGATGAACAAACTCAAGAGGAGACTGCAGAGGAACAGgCTATAGTCACTATCAAGGCAGAACCTAATGATGATATCGAAGAGTTTTATGAAGTACCTCCTCAACTTTCACCTCATTCGCAAGAATCTCGTTCACAAGATTTTGATGATCATCTAAACTTATCAGCAGcaAATGGTCATGAAGACGATGTGGCAATGAGAAAAAACAGTAAGCAATGtacattttgtaataaactGTTTAGCACACCTGGTAATCGCATGAAGCATGAACGTGTTATACATAATCGAAAAGTGCCCATTTTATCTAACTCAAACAATGATGAGAACTCTCAACAATCCTTGGAGTCTTACGTCAGCAGTTCAATGCATACAGATGGGTCTCATATGGAATCGGAAAATGAGCATTCAGAAAACTCGAATATCCAGAAAATACAATTTGCGGCCGGTTTACGTTTGAAACAAAAGTCTACCGGCTCTTCGACACCGTCTACAATTGAGGGTCCCCTGTCGCCAATCGAACTGGCGTACGTTGAACGTAGCAAAGCACTAGTATCCATGCTGCATAAATTTAGATGCGCCTGTCACAACGTCTCTTTCCCGACAGTTAAGCGCTTGTTCGCCCATTTGCGTATGAGTTACACTTGGTTTCCGATATTCACGTGTTACAATTGCGTCATAACCTTCTCGACTAGATCTCTGAATATGAGACACACCGGTAGATGCGCAAAACCGTACTTGGAAAACAGCATGAAACTGGCCGAAATGAAAAAACGCACGGAAACAAAGGTACGTTTGTATCAGTACAGTAAATGCAATAAGTGCGAGAATTTATACGCCTTTTACGAGGACTACTGCGATCACATCGACAGGGAGCATACGTCGGAACCGCCTTACGTTTGTATTTGCTCGAAACAGTTTGAAAGTGCCGAAGGATTTAATCAGCACAGGTATAATTCCTGCTACTTGAGCTACTATTGCGATGTTTGCTATAATATCTTCGAAACGCTGGACGATTTTCGCATTCACTGCGAAGATGAACACGATAAAATTGAAGACTTCGTCTTCGTAACTCCGAATCCCACTTTCCAATATGTTACGAGAGAAGACATCAATGCTTCGCGTAAGAGAACCCACGATGAGATGGAGCAATCGGGCGAAGCAAATGGTGAAATAGGCGAGGCTCCGGAAGACGGAAACgatagaaagaaatttattccGAATAGGGTGTACAATGAGCCGTCAACTTGCGACCTCTGTGATCGTCGCTTTTCCAATTATTACAGCTTGAGGAAGCACATGAAAATGCACAGAAGGAGCAGCATAGCTAACGGTTGGAAGAGCAAACCTTCGACGTGCGATAAATGCGGAAAAGTTTTCTCAACCTACTACAACATGATCAGACACTACAAGGTTCATGATGAAACGGAGAAGCATCTACAGTGCGCTTTGTGCACTGATAAATTCAGATTGGTGTCCGAGTTGAAAGACCATTTGATACTGGTTCATGGTCGAGCAAATGTTTGTCAGGAGTGCGGAAGGCAGTTCGAATCTGTGAAGGAGCTAGAACAACACAGAAGCGTCCACTTGAACATTAAAGTTTACAGGGATTCCAAGACACAGTCCTATAGAACAGGAACAAAGCCTAGATATACATGCGATTTATGTGAGAATGTTTTTGATACTGATATCGAACTTAGCGAGCACATTGCCTTGCACAATAACATGTCCAATATGGAAAAGCCCGAGGAGAATGAGCCTGAAGATAGGAAAGATTTCGGCAGGTTCTCCTGTGCCGATTGCGACAGACATTACGTCAGTTACAAAGGATTGTGGTTACATAATAGAAGACATCATCCGGAACGCAAACCACCGCCTCAAACTTTCGAATGTCAATATTGCGACAGGGTGTTGCAGACGAACGCAGCTTATCAAATGCACAAACAGATGCACGAAAGAATGCAAGAACGTATGCAGAAGCAATCCACTTTAGCGGCACATATCAAGAAACCGGACGACGATGAGGAATCGTACTTTACTTGCAAACATTGCTTCAAAGTGTTCTCCAACAAGTACAACTTGAAGACGCATTTGAAAACGCACGGAATATACGTCAGTCCTGGCAGGACGTACTCGAAGTCCGGTAAGTTCGTCAAGACGTTCTGGTGTGATCTTTGTCATCAGGCCTGTCAGGGATATGCTGAATTGCAAAAACATAAACAGGAACATATTAAAGAGAGAATGAAAGAAACGCACAAGCGCCAGCAGGACGAAGAGGTGGATATCAAACCCGAAATATTCAATTGCGATCTTTGCACGAAAGGATTTTTATCCAGAGGGCAATTGTCCGCCCACAAAGCGACTCATGAACAAGAAATTAAACCCACACAGAAAAGAAACTTCgtgtattgtaaatattgcaaAGTACCATTCCTTAATGTTGAAGGTCTGAATAGGCACATGGAAAACGAACACAATGAAATaagaatacaaaagaataaaacgtTAGCGAAGAAACACGCTTGTAATTTGTGTAAGAAAGTGTTCGACACCGCGGGCGCGTTGTGTTCACATCAAGGCTGGCATAAGCGCGGTAAATCGGAGAAACAACTGAAATCGGATAAAATACAACAGCAACAGCAGCAACTACAACAGCACGGTAATAGTAGTAATATCAAACATGAATGCACTTCCTGTAGTTTGAGTTTCTTAACGGATACTGCCTTACAAATTCACATATTGGAAGCGCACAGGAACGTCAACGCCCAAATACTACCATCGAGATGTACGACCTGCAACATCGAGTTCAAAACGCAGGCTTCCTACGATGAACACGCGAGATTGCACCGAACGACCTCGACGACCTTCCAATGTAAGTATTGCACGAAGAAGTTTAACAAAAGCGAAACGTTCAATATACACGTGAACGAATCTCATCCGGAGTACGCCGACGCCAAGTTCAAGTGCCATCAATGTGAACGCATATTCGAGAAGCAAAACGCTCTGACGATTCACTTGAAGGTGCACGATAGACAGCGGCTGACCGGGGCGCCCATCAAGCAGCCGAAATCGCACGTGTACACGTGCTCGATATGCCACTTGGGCTTCGAAATTCCCAAGGACCTTCGAAATCACATAATAACAAAGCATCCATTTTAG
Protein Sequence
MGEETFGNYSSCCRLCLSDKFNNLKPIFEDEAESRTLVQKILNFIGVEVSPNDKISTMICNQCRSKVNNWDVFKVECNKNQTKLHDWLNSWNASTGNNNIGNVTIHVKDEPVDRDEQTQEETAEEQAIVTIKAEPNDDIEEFYEVPPQLSPHSQESRSQDFDDHLNLSAANGHEDDVAMRKNSKQCTFCNKLFSTPGNRMKHERVIHNRKVPILSNSNNDENSQQSLESYVSSSMHTDGSHMESENEHSENSNIQKIQFAAGLRLKQKSTGSSTPSTIEGPLSPIELAYVERSKALVSMLHKFRCACHNVSFPTVKRLFAHLRMSYTWFPIFTCYNCVITFSTRSLNMRHTGRCAKPYLENSMKLAEMKKRTETKVRLYQYSKCNKCENLYAFYEDYCDHIDREHTSEPPYVCICSKQFESAEGFNQHRYNSCYLSYYCDVCYNIFETLDDFRIHCEDEHDKIEDFVFVTPNPTFQYVTREDINASRKRTHDEMEQSGEANGEIGEAPEDGNDRKKFIPNRVYNEPSTCDLCDRRFSNYYSLRKHMKMHRRSSIANGWKSKPSTCDKCGKVFSTYYNMIRHYKVHDETEKHLQCALCTDKFRLVSELKDHLILVHGRANVCQECGRQFESVKELEQHRSVHLNIKVYRDSKTQSYRTGTKPRYTCDLCENVFDTDIELSEHIALHNNMSNMEKPEENEPEDRKDFGRFSCADCDRHYVSYKGLWLHNRRHHPERKPPPQTFECQYCDRVLQTNAAYQMHKQMHERMQERMQKQSTLAAHIKKPDDDEESYFTCKHCFKVFSNKYNLKTHLKTHGIYVSPGRTYSKSGKFVKTFWCDLCHQACQGYAELQKHKQEHIKERMKETHKRQQDEEVDIKPEIFNCDLCTKGFLSRGQLSAHKATHEQEIKPTQKRNFVYCKYCKVPFLNVEGLNRHMENEHNEIRIQKNKTLAKKHACNLCKKVFDTAGALCSHQGWHKRGKSEKQLKSDKIQQQQQQLQQHGNSSNIKHECTSCSLSFLTDTALQIHILEAHRNVNAQILPSRCTTCNIEFKTQASYDEHARLHRTTSTTFQCKYCTKKFNKSETFNIHVNESHPEYADAKFKCHQCERIFEKQNALTIHLKVHDRQRLTGAPIKQPKSHVYTCSICHLGFEIPKDLRNHIITKHPF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00070626;
90% Identity
-
80% Identity
-