Asol103873.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Amphimallon solstitiale
Gene Symbol
-
Assembly
GCA_963170755.1
Location
OY720680.1:46431104-46449805[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 0.0038 1.3 12.8 1.7 2 23 184 206 183 206 0.96
2 20 0.067 22 8.9 0.5 1 20 332 351 332 353 0.95
3 20 2 6.5e+02 4.3 1.2 1 19 437 455 437 460 0.94
4 20 4.9e-06 0.0016 21.9 2.1 2 23 529 550 528 550 0.97
5 20 3.1e-06 0.001 22.5 1.0 2 23 565 586 564 586 0.97
6 20 9.9 3.2e+03 2.1 0.1 2 23 594 616 593 616 0.90
7 20 0.0017 0.55 13.9 0.2 2 23 621 642 621 642 0.96
8 20 0.0071 2.3 12.0 0.1 1 23 664 686 664 686 0.95
9 20 0.015 4.8 11.0 4.3 1 23 710 732 710 733 0.95
10 20 0.047 15 9.4 0.4 1 23 743 765 743 765 0.97
11 20 3e-06 0.001 22.6 7.0 1 23 793 815 793 815 0.99
12 20 2.8 9.2e+02 3.8 2.3 3 23 837 857 835 857 0.96
13 20 0.0088 2.9 11.7 0.4 1 23 881 903 881 903 0.98
14 20 0.14 44 7.9 0.1 2 23 917 939 916 939 0.94
15 20 0.0015 0.49 14.1 1.2 1 23 954 976 954 976 0.93
16 20 0.75 2.5e+02 5.6 0.3 1 23 1023 1046 1023 1046 0.93
17 20 0.011 3.5 11.4 0.6 2 23 1057 1078 1056 1078 0.96
18 20 0.00075 0.24 15.0 3.0 1 23 1085 1108 1085 1108 0.95
19 20 0.00017 0.057 17.0 1.9 1 23 1116 1138 1116 1138 0.99
20 20 0.00065 0.21 15.2 0.6 1 23 1156 1179 1156 1179 0.98

Sequence Information

Coding Sequence
ATGGGAGAGGAAACATTTGGGAATTACAGCTCTTGTTGCCGATTGTGCTTATCGGATAAGTTCAActatttgaaaccaatatttgAGGACGAAGCAGAAAGTCGTATATTGGTTCAAAAGATTCTTAATTTTATAGATGTAGAGGTGTCACCAAATGATAAGATTTCCACAATGATCTGTAATCAGTGTCGATCAAAAGTGAACAATTGGGATATTTTTAAGAACGAATGCAACAAAAACCAAACCAGATTACACGAATGGTTAAATAGTTGGAAtgcttcaaatggaaataataacATAGGAAATGTgACCATCCAAGTTAAGGATGAACCACTTGATAGAGATGATGCTACTCATGATGTAGCTTCAGAGGAACAGGGTGTTGTTACGATCAAGTCAGAACCTCATGACATTGAAGAAAATTATGAATTGCCTCCTCACCTTTCACCACATTCACAAGCATCTCGTTCACAGGAATTTGAAGACCCTCCAAACATGTCAACAGCAAATGGTCATGAAGACAGTGTGGCAATGAGAAAAAACAGTAAGCAATGTACATTTTGTAATAAACTGTTTAGCACATCTGGTAATCGCATGAAGCATGAACGTATTATACATAACCGGAAGTTACCTACAGCTAATGcCAACTCCAATAACGACGAGAACTCCCAACAATCCATGGATTCCTACATCAGCAGTTCCATGCACACGGACGGCTCCCAAATGGAATCAGAAAACGAACACTCGGAGAGCTCGAACATTCAGAAAATTCAATTCGCCGCCGGCCTGCGTCTCAAGCAAAAATCTACCGGTTCGTCGACGCCGACCACGATCGAGGGCCCCATCACGGCCATCGAATCGTCCTACATCGAACGCAGCAAGGCGCTAGTCTCCATGCTGCACAAATTCAGGTGCGCGTGTCACAACGTCTCCTTCCCCACCGTCAAACGTTTATTCGCGCATCTGCGCATGAGTTACACCTGGTTCCCGATATTCACCTGCTACAATTGCGTCATCACATTCTCGACCAGATCGTTGAACATGCGCCACACCGGCAGATGCGCCAAACCCTATCTGGAGAACAGCATGCGACTGGCGGAGATGAGAAAACGCACCGAGACGAAGATACGCCTGTATCAGTACAGCAAATGCAACAAGTGCGAGAATTTGTACGCCTTTTACGAGGACTACTGCGATCACATCGATAAAGAGCACACGACCGAACCGCCTTTCGTGTGTATCTGCTCGAAACAGTTCGACAGCGCGCTAGAATTCAACATGCACCGCCACGTCTCCTGCTATTTGAGTTATTACTGCGACGTTTGTTACAATATTTTTGAGAGTCTGGACGATTTCCGCGTACATTGCGAAGAGGAACACGACAAGATCGACGATTACGTTTTCGTTGCGCCCAATGCCACCTTTACGTACTGCACGAGGGAGGAAATAACAGCATCGCGTAAGAGAACGCACGACGAAATGACTCAGTCGCAAACTGAAGCGAACGGCGAGAACGGTGAAGTTGAGGAAGACGGAAACGACAGGAAGAAATTCGTTCCGAACCGCGTCTATAATGAACCTTCGAGCTGCGATCTGTGCGACCGGCGATTTTCTAATTATTACTCTCTCAGGAAGCATATGAAGATGCACAGGAGAAGTAGCATAGCGAACGGATGGAAAAGCAAACCGTCGACATGCGATAAGTGCGGTAAAGTCTTCTCGACGTATTACAACATGATCAGGCACTATAAGGTACACGACGAGCTGGAGAAACACTTACAATGCGCCCTTTGTGCTGATAAATTTAGACTAGTATCGGAGCTGAAGGATCACTTGATATTAGTTCACGGTAGAGCGAATGTTTGCCAAGAATGCGGACGCCAGTTCGAATCCGTAAAGGAACTGGAACAACACAGAAGCGTTCACCTAAACATTAAAGTGTACCGCGATTCCAAAACTCAATCCTACAGGACGGGCACGAAGCCGAGATACACGTGTGATATATGCGAAAACGTTTTCGATACCGAAAACGAACTCAAAGAACATGCCACGTTGCACGGTGGTGGGGTGTCTACATACGAAAAACCCGAGGAAACCGAACCTGAAGATCGAAAAGATTTCGGTAGGTTCTCTTGTACGGATTGCGATCGCCATTACGTTAGTTATAAAGGATTGTGGTTGCATAATAGGAGGCATCATCCGGAACGCAAACCTGCACCTCAGACATTCGCCTGTCAATATTGCGACAGGATATTGCAGACAAACGCCGCCTATCAGATGCACAAGCAGATGCACGAAAGGATGCAAGAACGCATGCAGAAGCAAGCGAACATTTCCGCGCACATCAAGCGTGGCGACGACGAAGAAGAATCCTATTTCACATGCAAGCACTGCTTCAAGGTCTTTTCCAACAAGTACAATCTGAAGACGCATCTGAAGACTCACGGGATATACGTCAGTCCCGGAAGGACCTACTCGAAATCGGGAAAGTTTGTGAAGACCTTCTGGTGCGATCTCTGCCATCAGGCGTGTCAGGGCTACGCGGAATTGCAGAAACACAAACAGGAGCACATCAAGGAACGGATGAAAGAGGCGCAGAAACGGCCTCCAGTCGAAGAGGAAGACATCAAACCGGAAATATTCAGTTGCAATGTCTGCACGAAAGGATTCCTCTCGCGGGGGCAATTATCCGCTCACAAGGCCACGCACGAACAGGAGAATCGCACCATGCAGAAGAAGAATTTCGTGTATTGTAAATACTGCAAAGTACCATTCCTCAACGTCGAAGGCCTAAATAGGCACATGGAAAATGAACATAACGAGATTAGAATACAGAAGAATAAGATCCTGACTAAAAAGCACGCGTGTAATTTGTGCAAGAAAGTCTTCGATACTGCGGGGGCGCTGTGCTCCCATCAGGGTTGGCACAAACGGGGCAAATCGGAGAAACAATTGAAATCGGATAAACTGCAGCAGCAACAACAGATgcagcaacaacaacaacaacaacatcTACTGCAACAACAACAGCAGCAACAACATCACAGCAGTTCCGGCGGCGGCAAACACGAGTGCACTTCCTGTAATCTGACTTTCCTCACCGATACGGCGCTGCAGATTCACATATTGGAGGCGCACAGGAACGTGAACGCGCAAATACTACCGTCGCGATGTACCACTTGCAACATTGAATTTAAGACGCAGGCTTCCTTCGATGAACACGCGAGATTGCACAGGACTACGTCGACGACCTTCCAGTGTAAATATTGCACGAAGAAGTTCAACAAGAGCGAGACGTTCAATATTCACGTGAATGAAACACATCCGGAGTACGCCGACGCCAAGTTCAAGTGCCATCAGTGCGAGCGCATCTTTGAGAAGCAAAACGCTCTGACGATCCATCTCAAGGTGCACGACCGACAGAGGTTGACGGGGGCTCCGATAAAACAGCCGAAATCACACGTTTACACCTGTTCCATATGTCACCTAGGATTTGAAATACCCAAGGATCTGCGGAATCACATCATTACGAAACATCCATTTTAG
Protein Sequence
MGEETFGNYSSCCRLCLSDKFNYLKPIFEDEAESRILVQKILNFIDVEVSPNDKISTMICNQCRSKVNNWDIFKNECNKNQTRLHEWLNSWNASNGNNNIGNVTIQVKDEPLDRDDATHDVASEEQGVVTIKSEPHDIEENYELPPHLSPHSQASRSQEFEDPPNMSTANGHEDSVAMRKNSKQCTFCNKLFSTSGNRMKHERIIHNRKLPTANANSNNDENSQQSMDSYISSSMHTDGSQMESENEHSESSNIQKIQFAAGLRLKQKSTGSSTPTTIEGPITAIESSYIERSKALVSMLHKFRCACHNVSFPTVKRLFAHLRMSYTWFPIFTCYNCVITFSTRSLNMRHTGRCAKPYLENSMRLAEMRKRTETKIRLYQYSKCNKCENLYAFYEDYCDHIDKEHTTEPPFVCICSKQFDSALEFNMHRHVSCYLSYYCDVCYNIFESLDDFRVHCEEEHDKIDDYVFVAPNATFTYCTREEITASRKRTHDEMTQSQTEANGENGEVEEDGNDRKKFVPNRVYNEPSSCDLCDRRFSNYYSLRKHMKMHRRSSIANGWKSKPSTCDKCGKVFSTYYNMIRHYKVHDELEKHLQCALCADKFRLVSELKDHLILVHGRANVCQECGRQFESVKELEQHRSVHLNIKVYRDSKTQSYRTGTKPRYTCDICENVFDTENELKEHATLHGGGVSTYEKPEETEPEDRKDFGRFSCTDCDRHYVSYKGLWLHNRRHHPERKPAPQTFACQYCDRILQTNAAYQMHKQMHERMQERMQKQANISAHIKRGDDEEESYFTCKHCFKVFSNKYNLKTHLKTHGIYVSPGRTYSKSGKFVKTFWCDLCHQACQGYAELQKHKQEHIKERMKEAQKRPPVEEEDIKPEIFSCNVCTKGFLSRGQLSAHKATHEQENRTMQKKNFVYCKYCKVPFLNVEGLNRHMENEHNEIRIQKNKILTKKHACNLCKKVFDTAGALCSHQGWHKRGKSEKQLKSDKLQQQQQMQQQQQQQHLLQQQQQQQHHSSSGGGKHECTSCNLTFLTDTALQIHILEAHRNVNAQILPSRCTTCNIEFKTQASFDEHARLHRTTSTTFQCKYCTKKFNKSETFNIHVNETHPEYADAKFKCHQCERIFEKQNALTIHLKVHDRQRLTGAPIKQPKSHVYTCSICHLGFEIPKDLRNHIITKHPF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00434335;
90% Identity
-
80% Identity
-