Dalb026699.1
Basic Information
- Insect
- Dermolepida albohirtum
- Gene Symbol
- egg
- Assembly
- GCA_031893035.1
- Location
- JAVIWB010004942.1:524109-546957[-]
Transcription Factor Domain
- TF Family
- MBD
- Domain
- MBD domain
- PFAM
- PF01429
- TF Group
- Unclassified Structure
- Description
- The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.41 2.7e+03 -0.8 0.1 31 42 647 658 611 666 0.82 2 2 5.3e-16 3.4e-12 46.9 0.0 5 75 688 751 685 753 0.91
Sequence Information
- Coding Sequence
- aTGGATGAATCTATGGACATAGAAATTATAGAAGATAATAGTCCTGATGAACCTTCAAATGTGTTAGACAAAATTAATGGAGATATAGTAATTTTAGACGATGATCCAGtttgtgaGACAATCGATTTGGTGCGTTCAGAAATGACTGGCAATacgaaatgtattaattatgcATGTAAAGGCGGAACTCTTATGATAGAACCACCTGGCTTTTGTTTAAGTTTTTATAGAGTTAAAAATAAACCTAATAAGAAACAGCAAATATGCATGGACTGTTATGATAATGCTGTAGACCATTATGatcaattagcagaagcgttaacaTCAAGTCAGGTTCTCCTGGATGTTGAAATGCCTTTTAGGAATGATGTTGTTGAAATAGAAGATTCCGATTCAGATGAAGAAGCTGGTGAAGATGTATATGTAACAGATGAAACTGTTAAATTATTAGAAGAACATTTTGATACTACAATGAGTAAGGTTTTGACACAGTATGATTTTCATGATCAAATAGACAAAGCTATATCATCTTTAAGTAGTAAATGTGATACTATAAATGATTCCTTTCTGGAAGTAAAAACTATGTTCAAAAGTATACGTTCTGAAACAGATGAGATGATTTTTCAACTGTCTGATATTTTAAGGCCAGATAATGTTGAGTTGGTTGCTCTAGATATAACACATAAAAGGGCACAGGTAGTTAGGAATCAGCCTACCAAAAGAACAAAacCAAATACTCCTACAACAACAAAGGCACAGAGTACGTTATCTTCAAAACAAGTACAAACATCAACAAATACTGCTCAGAAAACACCGATTCCAGCTGCAACTACTGCCTCAAAAACAACACCTACAACAACGACGTCAGTAGCCGCAACTACAGATCCAGATTCAAATCTCATAATTTTGCAGGAATCAGATAATGACGCTTCTGCAATAGATAATATTAACACTTTCGCAGATGATTTCGATTCGCCACCGACTAATTTACCACCAAAAGGAACTTTGATTAAGCCGCCACTTGTTGTAGGTGAAACATATTATTCGAATCGTGCTGAAGTAATGGGTGCTTGGGTTAAAGTCAACCTAAAGGAGATAATAACACCTGGAACAAGGAGAGATGGTCAAATTTACACAAACACAATGTACGTTGTAGTTTTCGAAAATCGACAGAAGactgcaaaacaaaaaattgtaagCGGAAGAGAACTTGCTTATTCTACACCTGGTACGGTGCAGTTCGAAGTCGGTGCGAGAGTGATAGCAGTTTTTCGTGAAATACTGTCGCCAGGGGAAGCATCTAGGAAAGTTAAGAGGGACATTTTCTATCCTGGCACCGTAGCGGAACCTCTatcaaattacaataaatatagGTATCTTATATTCTTTGATGATGGCTATGCACAATATGTCAATTTCAATTTGGTTCATCCAATCTATGAAAGTAGCAAAGAGGTTTGGGaggatgtaaatattaattctagAGGCTTCATCAAGAAGTACCTTGAAAAATATCCAGAGAGGCCTATGGTGAAGTTACACAAAGATCAAACTATTAGAACTGAATATAAcgGCAAATGGTGGGTAACAACTGTCATGAGTGTGGACTGTTCTCTTGTTCAAATGTTTTTCGATGCGTCAAATAGAATTGAATGGATTTACAGAGGGTCAACAAGGTTGAATCCCATGTTCAAAGAAGAGCAAGCGGCGAGTAATAGATTACAATATCGACAGAGGATGACCAGGAAAACGAACGTCACTTCTGAACCATATGTGGAATATCCTCGTCCGAATTCAGAACAATCCGAGCAGCAACAACAGCAACCTGCGCAAAGGTCAGTGGCTAGAAAAAGTACTTCAAGACCTCCACAATCcggaaataatattacttatggGATTAACCAATTTTTACCAACACCTACGCGTGAACCTCCAGCAACAAAAATTGTGTATTACACACCAAGAAGGCAAAAACCGAAAACCAATGTCTACACATCTCATTCTTGCAATCCTAAATGCAAGGACTTCATGTACTGTTCTTTATCAAGGCTCAAGGGCTATAGTCCTCTCTCGAAACCGTTATTGTGCGGCTTTTATAGACTTATGTACAAGGCTAAGAACAAAAAGTCCGTATTATATAAAGCGCCTTGTGGAAGAACTTTGCGAAGCATGCAGGAAGTGCACATGTACCTACGAATTACAAAATCAGATTTGACTGTGGATTTGTtcgattttaatgtttacgtTCGTTGCTTGGCAGAATTTATGGTAGAACAGAAGAACATACTCATAAAAGATTTGTCCCaaggtAAAGAGGAATGTCCAATTACTGttgtaaattatgttaattCAGCAACATTAAATTTCTGTAATTACTCAACAAAAAGGGAGCCTATGGAGGATGTATCATTGAATACTAGCACTGACTTCTTAACGGGTTGTGATTGTACAGATGATTGTATCgATCGACAAAAGTGTTCGTGTTGGCAATTAACATTACAATGTTTGAAATATATGGATAAAGATACAGATCCGGAGTCAGTTGGATATCAATATAGAAGATTACCCGAACCTATCTTTTCTGGCATAtacgaatgtaataaaaagtGTAAATGTTCATCAACTTGCTTGAACAGAGTTGTGCAAAATCCTCTTCATCATAAATTGCAGATATTCCAAACCGACATGAAAGGATGGGGCATTCGGTGTCTAAACGATATTCCACAGGGGTCATTCATTTGTATATACGCTGGCGTTTTACTTACTGAAGAAATGGCAAATAGGgatGGCAAATTTTATGGCGACGAATATTTAGCTGAGTTAGATTTCATTGAAACTGCCGAGAGAACTAAAGAAGACTACGAGGAAGATCCATATCAAGATGAAATAGTCAAAGATACCAAAACGCCTGAAGAATCTGGTGATGATAGTGTGGCCGATGAAGATGAAGAATACGAAGGTATTACTAATGCAGCAGAAGATAGGGACTTTATTCCCACAAGTTTTCAGTCAAAAAGGCGCACTGAAGACATTGTTATTAGTGGTATAAGGACAAGACTGAGAAAACGTAATCAAGAAGTAGTCGTTAAACAAGAAAAACGGGCAATCATTCCATTTAAACAAATGGACGAGGATGATACAGTTATGATTAGTGATGATGAAGATTATGcaCCAAGAGAACCTTCTAGTTTTAATCCTAAGACTGATACGAGTTTAGGACAAGGTAgtggaagaaaatataaatctgtTAGAGAAATGTTCGGCTCAGATGAAGACGTCTACATTATGGACGCGAAAAATACAGGAAATATTGGTAGATTCCTGAACCATTCTTGCTCACCGAATATATTTGTCCAAAATGTTTTCGTCGATACTCACGACCTTCGATTTCCATGGGTTGCTTTCTTTACTTTGAGTTACGTACGGGCAGGAACTGAACTAACTTGGAATTACAACTATGATATAGATAGCGTTCCTAATAAAGAATTGCCATGTTATTGTGGTTCAAGTGAATGTAAAGGTCGATTATTGTAA
- Protein Sequence
- MDESMDIEIIEDNSPDEPSNVLDKINGDIVILDDDPVCETIDLVRSEMTGNTKCINYACKGGTLMIEPPGFCLSFYRVKNKPNKKQQICMDCYDNAVDHYDQLAEALTSSQVLLDVEMPFRNDVVEIEDSDSDEEAGEDVYVTDETVKLLEEHFDTTMSKVLTQYDFHDQIDKAISSLSSKCDTINDSFLEVKTMFKSIRSETDEMIFQLSDILRPDNVELVALDITHKRAQVVRNQPTKRTKPNTPTTTKAQSTLSSKQVQTSTNTAQKTPIPAATTASKTTPTTTTSVAATTDPDSNLIILQESDNDASAIDNINTFADDFDSPPTNLPPKGTLIKPPLVVGETYYSNRAEVMGAWVKVNLKEIITPGTRRDGQIYTNTMYVVVFENRQKTAKQKIVSGRELAYSTPGTVQFEVGARVIAVFREILSPGEASRKVKRDIFYPGTVAEPLSNYNKYRYLIFFDDGYAQYVNFNLVHPIYESSKEVWEDVNINSRGFIKKYLEKYPERPMVKLHKDQTIRTEYNGKWWVTTVMSVDCSLVQMFFDASNRIEWIYRGSTRLNPMFKEEQAASNRLQYRQRMTRKTNVTSEPYVEYPRPNSEQSEQQQQQPAQRSVARKSTSRPPQSGNNITYGINQFLPTPTREPPATKIVYYTPRRQKPKTNVYTSHSCNPKCKDFMYCSLSRLKGYSPLSKPLLCGFYRLMYKAKNKKSVLYKAPCGRTLRSMQEVHMYLRITKSDLTVDLFDFNVYVRCLAEFMVEQKNILIKDLSQGKEECPITVVNYVNSATLNFCNYSTKREPMEDVSLNTSTDFLTGCDCTDDCIDRQKCSCWQLTLQCLKYMDKDTDPESVGYQYRRLPEPIFSGIYECNKKCKCSSTCLNRVVQNPLHHKLQIFQTDMKGWGIRCLNDIPQGSFICIYAGVLLTEEMANRDGKFYGDEYLAELDFIETAERTKEDYEEDPYQDEIVKDTKTPEESGDDSVADEDEEYEGITNAAEDRDFIPTSFQSKRRTEDIVISGIRTRLRKRNQEVVVKQEKRAIIPFKQMDEDDTVMISDDEDYAPREPSSFNPKTDTSLGQGSGRKYKSVREMFGSDEDVYIMDAKNTGNIGRFLNHSCSPNIFVQNVFVDTHDLRFPWVAFFTLSYVRAGTELTWNYNYDIDSVPNKELPCYCGSSECKGRLL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -