Dalb023214.1
Basic Information
- Insect
- Dermolepida albohirtum
- Gene Symbol
- lrrfip2_1
- Assembly
- GCA_031893035.1
- Location
- JAVIWB010004231.1:419640-450784[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.028 1.1e+03 -0.3 0.5 49 69 36 55 7 141 0.60 2 3 8e-107 3.1e-102 343.0 33.2 1 300 160 454 160 454 0.94 3 3 0.0069 2.7e+02 1.7 0.4 120 163 452 495 451 505 0.87
Sequence Information
- Coding Sequence
- ATGGAGCGCAGTGACAGTGCGGATTCTCTGGAGGATTTATTGAATAACCTCAACGATGACAGTGACGAAAGTTTTACGGACAGAGTAACCAGCACGAAACGTAAGAAAGAGGCCCAAGTAAAGGATGATCAGGCGGTTAGTGTTCAGAAAGTAAATGAAACTAATCTTGCGAATGAAAAAAGTTTAGAAGATGAAATTGTGAAGATCCCTAACCAGTCAATAAATGAACTAAATGTGATAGATGATGATTTTGAAAAAGCTACGGAGTACTTTGAGCCGGTGGAATGCATAAATCCAAAGTTAGACAgtgataatttattaagtagTGCGAAGTTAATTTTACAAGGTGTGACCGAAAGTGAGTCTTCCAGTGATTACATTCATTATAAAGATAACAGAACGAGTCGGAGTCATAGTGTGTGCTCGCATTTAGAGGACGATGTCATCAATCAATTTCTGGATAAGACTACAGAGAATGCCGAAGCGCGCATGCTGGCAAAGCGACAGGCCCGTGCAGAAGCCAGGGAAATTCGCATGAGAGAACTAGAAAGACAACAAAAAGAACAAGAAGAAAATGCCGATAGACAGTTTGACATGTTGGCGGAGCCTATCAGGGCTGCTCGTACAACGGGGTCCAGATACCTTTCGAGTAGGAGAAGTTCTGAAGACTCCTTGGAAGATGGTGGCAGTCTTAGGGAATTAcgaCATGAACTTAAAGAAGTCGAAGAGAAGTTCCGCAAGGCCATGGTGGCGAACGCCCAATTAGATAATGACAAAGCGGCACAAACATATCAACTGGAACTACTTAAAGATAGGTTAGAAGAACTAGAAGAAGAACACTCCCAATTAAAAAGGGAACACAGGGATACATGCAGAGAACACGATCAACTTAAGAGATTGACAACGAGGTTAAAAGAAGAATTGGCTGTGACGAAAGCTGACTTAGAGGAACGAGATAGGTTAATAGCGGAAAAGGGATTAGTGATTGTAGGTGATGATTCAATGTTGAGCGAAGAAGCTGGAACATCAGATGGGGCTGTGAATGGATTAGGTACGCCTAAAAAGGCGTTGGTTAGTGCAGAAAACGCACAGTTATTAGTTAATGCAGGAGAAGGTAGTTTAGATGTTCGGCTGGCTCGATTTGCGAAAGAAAAGAGTGAACTTCAAGATCAAATTAGTCATTTGAAATTAGAATTGGAAGAAGAAAGGAGTAAACGGCGGAAATTCAGTGTATCTGGTATCACTTTGAACGGTCCGACGTCCGAAGCAGATTATGATGCTGCAGATATACAAAGGGAGGTCAGCAAGCAATTAGCAGAGTATAAATTCCGATCACAAAAAGCTGAACAGGATGTGGCCACATTGCAGGCAACAGTCGCCAGATTAGAAAGTCAAGTCATTAGGTATAAATCTGCCGCGGAGGTTTCAGAGAAATCGGAGGAAGCACTCAAGGCGGAAAAACGAAAATTACAGAGAGAGGAAACTTTAAGTAGCTCTAGCTCGTTTGATGAAAGCGTTACAGACAGCGGAGGTAGAAACTAA
- Protein Sequence
- MERSDSADSLEDLLNNLNDDSDESFTDRVTSTKRKKEAQVKDDQAVSVQKVNETNLANEKSLEDEIVKIPNQSINELNVIDDDFEKATEYFEPVECINPKLDSDNLLSSAKLILQGVTESESSSDYIHYKDNRTSRSHSVCSHLEDDVINQFLDKTTENAEARMLAKRQARAEAREIRMRELERQQKEQEENADRQFDMLAEPIRAARTTGSRYLSSRRSSEDSLEDGGSLRELRHELKEVEEKFRKAMVANAQLDNDKAAQTYQLELLKDRLEELEEEHSQLKREHRDTCREHDQLKRLTTRLKEELAVTKADLEERDRLIAEKGLVIVGDDSMLSEEAGTSDGAVNGLGTPKKALVSAENAQLLVNAGEGSLDVRLARFAKEKSELQDQISHLKLELEEERSKRRKFSVSGITLNGPTSEADYDAADIQREVSKQLAEYKFRSQKAEQDVATLQATVARLESQVIRYKSAAEVSEKSEEALKAEKRKLQREETLSSSSSFDESVTDSGGRN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -