Basic Information

Insect: Dendrolimus punctatus
Gene Symbol: Bcl11a
Assembly: GCA_012273795.1
Location: CM022555.1:9701806-9722720[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.019 1.2 10.0 0.1 3 23 129 149 127 149 0.97

2 15 0.3 20 6.3 2.3 1 23 329 351 329 351 0.98

3 15 0.0016 0.1 13.4 1.0 1 23 357 380 357 380 0.95

4 15 0.011 0.74 10.7 5.6 1 23 385 408 385 408 0.93

5 15 2.8e-06 0.00019 22.1 0.4 2 23 580 601 579 601 0.96

6 15 0.0019 0.13 13.2 1.3 1 23 607 630 607 630 0.97

7 15 1.6 1e+02 4.0 2.8 1 23 684 706 684 706 0.96

8 15 1.1 72 4.5 0.0 1 23 713 735 713 735 0.96

9 15 2.8 1.8e+02 3.2 2.4 1 23 741 763 741 763 0.86

10 15 8.7e-07 5.7e-05 23.7 0.6 1 23 769 791 769 791 0.98

11 15 0.034 2.2 9.2 5.3 1 23 800 822 800 822 0.98

12 15 5.6e-05 0.0037 18.0 1.2 2 23 868 889 868 889 0.97

13 15 0.014 0.89 10.5 3.8 1 23 906 928 906 928 0.96

14 15 2.7e-06 0.00018 22.2 0.4 1 23 934 956 934 956 0.97

15 15 1.1e-06 7.2e-05 23.4 3.1 1 23 962 985 962 985 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.019	1.2	10.0	0.1	3	23	129	149	127	149	0.97
2	15	0.3	20	6.3	2.3	1	23	329	351	329	351	0.98
3	15	0.0016	0.1	13.4	1.0	1	23	357	380	357	380	0.95
4	15	0.011	0.74	10.7	5.6	1	23	385	408	385	408	0.93
5	15	2.8e-06	0.00019	22.1	0.4	2	23	580	601	579	601	0.96
6	15	0.0019	0.13	13.2	1.3	1	23	607	630	607	630	0.97
7	15	1.6	1e+02	4.0	2.8	1	23	684	706	684	706	0.96
8	15	1.1	72	4.5	0.0	1	23	713	735	713	735	0.96
9	15	2.8	1.8e+02	3.2	2.4	1	23	741	763	741	763	0.86
10	15	8.7e-07	5.7e-05	23.7	0.6	1	23	769	791	769	791	0.98
11	15	0.034	2.2	9.2	5.3	1	23	800	822	800	822	0.98
12	15	5.6e-05	0.0037	18.0	1.2	2	23	868	889	868	889	0.97
13	15	0.014	0.89	10.5	3.8	1	23	906	928	906	928	0.96
14	15	2.7e-06	0.00018	22.2	0.4	1	23	934	956	934	956	0.97
15	15	1.1e-06	7.2e-05	23.4	3.1	1	23	962	985	962	985	0.98

Sequence Information

Coding Sequence: ATGAACAATATGGCAATGGATGTAGATCCGTTGAGCTATGAATATTCTCAGTATGATTATTCTCAAGCACCACATTCGAACCAATTTTACAATCCAAATCCaaactttaaaaatgaaacaCTACCTCATTATCAATATAGCCAAATACCGTACGAACCAGTAATACAACTGGACGAAACTCAACAAACGGATGTCgcattagataataattataataatgatcaACAAACCTATGAGGATGATAATAATGATACGCAAATGGCAGTTCACTTTGAACCAGAAGATGTAAAACCAGACATAAATGAGCTAAATAAGAAGAAACGTGGTAGACGTAGTAGTTACTGGAATGTCAAGGTGACAGACAAAAACTTTGCATTCTATGGATGTTCAATATGCAATATAAGTTTTATGGAGCTAGAGGAATTGGATAAGCATGTATCAACTCACAAAGATAGGATAACAACATACGGTTTGAGAGTACACAATCAGAAAAAGAAGAAGCAGATGAAGAAAGAGATGAAGAGGATGAAGAAAATCAAAATGGAGAAGAAAGAGTTCAAATTCGAAGTGGAGATCAAGCCTGAAGACGGTTATATAGGAAACGAGAAAGCTTCTGATGTTATGCATGctttacaagaaaataattcaACTGTGACTGATAGTggaaatttaattaatgcaaaCTCCGAAAGCAGTACAGTAAATAATGATGGTAacactgtaaaaaataataatgataatgtaACAAATGATAGTAATAATGAAAACTTAAACACAGCTAATGCTGAAAGCAGTGATGCAATAAATGAAAGTAATActgcaaaaaataataacaaaaatagtgCAATAAAAGAcacaaataatgataataaggTAGAtggtaaaaaaaagattaatagTGGTAGTAAAAAGgttgataataacaaagaatCGTCAAGTAAACGTGAGACAGATAAACAGAAACAAGATAATTTGCAAAAGATATACAAGTGTTTTGCGTGTCAAAAGCAGTTCTTGCTGAGTTATTACTTGAGGTTACATGTGAGGTCACATACagatgaaaaaccTTACTTATGCACCATATGCGGACAGTCCTTCATAACAGCCAGCAAACGTGGCAGGCACACAAAAAGGACGCATCTGGCCATAAGGCACCAGTGCAGGATATGCTATAAATTTTTTTCAAGGTTTGAACTGTTAACAAGGCATTTTGATAAAAAACATCCCGATGACAAGTTAGAAGGGGAACCATATGACTACAACGCGATCCTGCCTTACCTAAAAGAACTAGAAGAACAGCTCAAAGAGAAGACCGAGGGTGGAGACTGTAAGCCGAAGACCGAAGAGCCTTGGAAAGACCAGTGGAAGGAAGGTGAAGCTCCCAAAGAAGAGGTCAAGGATGAAGAGAAAGTCCCGGTGGTATTGAAAGATGAAGCGGAAATGAAATGTGAATTTGACTTCCCACCTGTACCCCCCAATATCATCGTGTCGGAAGTCAAAGTTGATGTTACGGACAATGAGGGTGTGGTGATCAAAAAGGAGATCGATGATGAACCTAGCGAGGAGGGTGGTGGTGATGATGCAGTAGCTGATGATCAGCCTGAGGACGATGCAAGGACTGACGGTTTATCTGACGACGATTATTTCCCCTCGAACACTTGGGCGTCCACGCCGAAGGTCGAATCCGCCCCTCCGTCCCCTGTGCGCAAGCGCAAACAGAAATCGGCCAAGAACCTCATCTGTGAGATATGCAACAAGGTGGTCAAGTCCAAATCATATCTCAAGATACATCTGAGGACTCATACTGGGGAGAAGCCGTTCAAATGTGTTGTTTGCGAGAAAGGCTTTATAACGGCTACCAAAATGCATAGACACGTGTTGACGCAACACGCGAGTACAGATGGCGCTGAGGGGGGTGTGAAACTCGAAGCCGCCTCCGACGAAGAAAATCAGGAGGGGAAAAAGGGCAAAAAAAAGAGATCGAAGAAGATCAAATCGAAGTTCGCCCTGCCGAAGGTGAAAGAGAAGAAGAAGCACCAGAAGAGACCGCACGCCTGCGAGTTTTGTCGGTTGAAATTCCTGCATCTGGAGACCCTGGAGATCCATAGGAAGTCCCACGAGGGTGAACCAATACCATACAACTGTTACTACTGCCTCGAGAGCATGGGCGACGCCGACGCCCTGAAGGAGCACGAGGCCACCCACGGGGGCCCCAAGCCCTTCCTGTGCACCCTCTGCGGGAGGGAGTACAAGAAGAGGGAAGCCATGGTGTTCCACCGGAAGCACCACAAGCCGGACAAGGAGTTCGTCTGCGACATCTGCTCGAAGCGGTTCCCGTCGCAGTACAAGCTGCAGCGGCACATCGCGACGCACAACCTGTGCAAGTACATCGTGCGCTACGAGTGTCCCGTCTGCGCGCACATGTTCCACACCAAGTACCACATCCAGATGCACCTCACCACCCACCAGAAGGAGGGCCTAATCGTAGAAGAGAATCGCAACGAAATACTGGCAATGGTGCTTCAGAACGTTAGGAAAATACCGACACAACCGGGATCGACCAGTCTCACCACGATCATACCTTCGGACGAGCGAAGCCGCGTGTGCAACATATGCGGCGAGATGTTCACGCACTTCTACTTCCTCGAGGAGCATCTGAAAACACACGGCTCGAAAATCGCCCTAGAGGACCTCAACAAGAGCGAGGAGAAGAAGTACATATGTCAAGTATGTAACAAAGGTTTTAAACTGCATTATTACCTGAAATTACATTCGTTCACACACACGAAGGAAAAGCCCTACATTTGTCAGCAGTGTGGAAAGGGCTTTATAACTAAAGGTAAGTTGAAGCGGCATCTAGAAGTACATACGGGATTAAAGAAGTACCAATGTCATGTGTGCTACAAGTTCTTCACGAGGCCCAGTTATTTGCGAATCCATGTGCGGACTATACATGGGACTCAGGACTATAATTTCAGGACGGACAAGCCATGGGAAGGGGCCATGGTCGATCAAGATGGTATTTAG
Protein Sequence: MNNMAMDVDPLSYEYSQYDYSQAPHSNQFYNPNPNFKNETLPHYQYSQIPYEPVIQLDETQQTDVALDNNYNNDQQTYEDDNNDTQMAVHFEPEDVKPDINELNKKKRGRRSSYWNVKVTDKNFAFYGCSICNISFMELEELDKHVSTHKDRITTYGLRVHNQKKKKQMKKEMKRMKKIKMEKKEFKFEVEIKPEDGYIGNEKASDVMHALQENNSTVTDSGNLINANSESSTVNNDGNTVKNNNDNVTNDSNNENLNTANAESSDAINESNTAKNNNKNSAIKDTNNDNKVDGKKKINSGSKKVDNNKESSSKRETDKQKQDNLQKIYKCFACQKQFLLSYYLRLHVRSHTDEKPYLCTICGQSFITASKRGRHTKRTHLAIRHQCRICYKFFSRFELLTRHFDKKHPDDKLEGEPYDYNAILPYLKELEEQLKEKTEGGDCKPKTEEPWKDQWKEGEAPKEEVKDEEKVPVVLKDEAEMKCEFDFPPVPPNIIVSEVKVDVTDNEGVVIKKEIDDEPSEEGGGDDAVADDQPEDDARTDGLSDDDYFPSNTWASTPKVESAPPSPVRKRKQKSAKNLICEICNKVVKSKSYLKIHLRTHTGEKPFKCVVCEKGFITATKMHRHVLTQHASTDGAEGGVKLEAASDEENQEGKKGKKKRSKKIKSKFALPKVKEKKKHQKRPHACEFCRLKFLHLETLEIHRKSHEGEPIPYNCYYCLESMGDADALKEHEATHGGPKPFLCTLCGREYKKREAMVFHRKHHKPDKEFVCDICSKRFPSQYKLQRHIATHNLCKYIVRYECPVCAHMFHTKYHIQMHLTTHQKEGLIVEENRNEILAMVLQNVRKIPTQPGSTSLTTIIPSDERSRVCNICGEMFTHFYFLEEHLKTHGSKIALEDLNKSEEKKYICQVCNKGFKLHYYLKLHSFTHTKEKPYICQQCGKGFITKGKLKRHLEVHTGLKKYQCHVCYKFFTRPSYLRIHVRTIHGTQDYNFRTDKPWEGAMVDQDGI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00432481;
90% Identity: iTF_00432481;
80% Identity: -