Basic Information

Insect: Dendrolimus pini
Gene Symbol: Bcl11a
Assembly: GCA_949752895.1
Location: OX457153.1:1667628-1683084[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.02 1.9 10.0 0.1 3 23 129 149 127 149 0.97

2 15 0.31 30 6.3 2.3 1 23 331 353 331 353 0.98

3 15 0.0017 0.16 13.4 1.0 1 23 359 382 359 382 0.95

4 15 0.012 1.1 10.7 5.6 1 23 387 410 387 410 0.93

5 15 3e-06 0.00028 22.1 0.4 2 23 583 604 582 604 0.96

6 15 0.002 0.19 13.2 1.3 1 23 610 633 610 633 0.97

7 15 1.6 1.6e+02 4.0 2.8 1 23 687 709 687 709 0.96

8 15 1.2 1.1e+02 4.5 0.0 1 23 716 738 716 738 0.96

9 15 2.9 2.7e+02 3.2 2.4 1 23 744 766 744 766 0.86

10 15 9.1e-07 8.6e-05 23.7 0.6 1 23 772 794 772 794 0.98

11 15 0.036 3.4 9.2 5.3 1 23 803 825 803 825 0.98

12 15 5.9e-05 0.0056 18.0 1.2 2 23 871 892 871 892 0.97

13 15 0.014 1.3 10.5 3.8 1 23 909 931 909 931 0.96

14 15 2.8e-06 0.00026 22.2 0.4 1 23 937 959 937 959 0.97

15 15 1.1e-06 0.00011 23.4 3.1 1 23 965 988 965 988 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.02	1.9	10.0	0.1	3	23	129	149	127	149	0.97
2	15	0.31	30	6.3	2.3	1	23	331	353	331	353	0.98
3	15	0.0017	0.16	13.4	1.0	1	23	359	382	359	382	0.95
4	15	0.012	1.1	10.7	5.6	1	23	387	410	387	410	0.93
5	15	3e-06	0.00028	22.1	0.4	2	23	583	604	582	604	0.96
6	15	0.002	0.19	13.2	1.3	1	23	610	633	610	633	0.97
7	15	1.6	1.6e+02	4.0	2.8	1	23	687	709	687	709	0.96
8	15	1.2	1.1e+02	4.5	0.0	1	23	716	738	716	738	0.96
9	15	2.9	2.7e+02	3.2	2.4	1	23	744	766	744	766	0.86
10	15	9.1e-07	8.6e-05	23.7	0.6	1	23	772	794	772	794	0.98
11	15	0.036	3.4	9.2	5.3	1	23	803	825	803	825	0.98
12	15	5.9e-05	0.0056	18.0	1.2	2	23	871	892	871	892	0.97
13	15	0.014	1.3	10.5	3.8	1	23	909	931	909	931	0.96
14	15	2.8e-06	0.00026	22.2	0.4	1	23	937	959	937	959	0.97
15	15	1.1e-06	0.00011	23.4	3.1	1	23	965	988	965	988	0.98

Sequence Information

Coding Sequence: ATGAACAATATGGCAATGGACGTAGATCCGTTGAGCTATGAATATGCTCAGTATGATTACTCTCAAGCTCCACACCCGAACCAATTTTACAATCCAAATCCAAACTTTAAGAATGAAACACTACCTCATTATCAATATAGCCAAATACCGTACGAACCAGTAATACAACTGGACGAAACTCAACAAACGGACATCGcattagataataattataataatgatcaACAAGCTTATGAGGACGATAATAATGATACGCAAATGGCAGTTAATTTTGAACCAGAAGATGTAAAACCAGACATAAATGAGCTAAACAAGAAGAAACGTGGTAGACGCAGTAGTTACTGGAATGTCAAGGTGACAGACAAGAACTTTGCATTCTACGGATGTTCAATATGCAATATAAGTTTTATGGAGCTAGAGGAATTGGATAAGCATGTATCAACTCACAAAGATAGGATAACAACGTACGGTTTGAGAGTACACAATCAGAAAAAGAAGAAGCAGATGAAGAAAGAGATGAAGAGGatgaagaaaattaaaatggaGAAGAAAGAGTTCAAATTCGAGGTGGAGATCAAACCTGAAGACGGTTATATAGGAAACGAGAAAGCTTCTGATGTTATGCATGCTTTACAAGAAAATAATTCAACTATGACTGATagtgaaaatttaataaatgcaAACTCCGAGAGCAGTACAGTAAATAATGACAGTAAcactgtaaaaaataataatgataataatgtaacaaatgaTAGTAATAATGAAAACTTAAACACAGCAAATGCTGAGAGCAGTAATGCAATAAATGAAAGTAATActgcaaaaaataataacaaaaatagtgCAATAAAAGACacaaataatgataataaggTAGATACtggtaaaaaaaagattaatagtGGTAGTAAAAAGattgataataacaaagaatCATCAAGTAAACGTGAGATAGATAAGCAGAAACAAGATAATTTGCAAAAGATATACAAGTGTTTTGCTTGTCAAAAGCAGTTCTTGCTGAGTTATTACCTGAGGTTACATGTGAGGTCACATACAgatgaaaaaccGTACTTATGCACAATATGTGGACAGTCTTTCATAACAGCCAGCAAACGTGGCAGGCACACCAAAAGGACGCATTTGGCCATAAGGCACCAGTGTAGGATATGCTATAAATTTTTTTCAAGGTTTGAACTGCTAACGAGGCATTTTGATAAAAAACATCCCGATGACAAGTTAGAAGGGGAACCGTATGACTACAACGCGATCCTGCCTTACCTAAAAGAACTAGAAGAACAGCTTAAAGAGAAGACCGAGGGTGGAGACTGTAAGCCGAAGACCGAAGAGCCTTGGAAAGACCAGTGGAAGGAAGGTGAAGCTCCCAAAGAAGAGGTCAAGGATGAAGAGAAAGTCCCGGTGATATTGAAAGATGAAGCGGAAATGAAATGCGAATTTGACTTCCCACCTGTACCCCCCAATATCATCGTGTCGGAAGTCAAAGTTGATGTTACGGACAATGAGGGTGTGGTGATCAAAAAGGAGGTCGATGAAGAACCTAGCGAGGAGGGTGGTGGTGATGATGCAGTGGGTGATGATCACCCGCCTGATGATGATGCAAGGACTGACGGTTTATCTGACGACGATTATTTCCCCTCGAACACTTGGGCGTCCACGCCTAAGGTCGAATCCGCCCCTCCGTCCCCTGTGCGCAAGCGCAAACAGAAATCGGCCAAGAACCTCATCTGCGAGATATGCAACAAGGTGGTCAAGTCCAAATCATATCTCAAGATACATCTGAGGACTCATACCGGGGAGAAGCCGTTCAAATGTGTTGTTTGCGAGAAAGGCTTTATAACGGCTACCAAAATGCATAGACACGTGTTGACGCAACACGCGAGTACAGATGGCGCTGAGGGGGGTGTGAAACTCGAAGCCGCTTCCGACGAAGAAAATCAGGAGGggaaaaagggcaaaaaAAAGAGATCGAAGAAGATCAAGTCGAAGTTCGCCCTGCCGAAGGTGAAAGAGAAGAAGAAGCACCAGAAGAGACCGCACGCCTGCGAGTTTTGTCGGTTGAAATTCCTGCATCTGGAGACGCTGGAGATCCATAGGAAGTCCCACGAGGGCGAGCCGATACCATACAACTGTTACTACTGCCTGGAGAGCATGGGCGACGCCGACGCCCTGAAGGAGCACGAGGCCACCCACGGGGGCCCCAAGCCGTTCCTGTGCACCCTCTGCGGGAGGGAGTACAAGAAGAGGGAAGCCATGGTGTTCCACCGGAAGCACCACAAGCCGGACAAGGAGTTCGTCTGCGACATCTGCTCGAAGCGCTTCCCGTCGCAGTACAAGCTGCAGCGGCACATCGCGACGCACAACCTGTGCAAGTACATCGTGCGCTACGAGTGTCCCGTCTGCGCGCACATGTTCCACACCAAGTACCACATCCAGATGCACCTCACCACGCACCAGAAGGAGGGCCTTATTGTAGAAGAGAATCGCAATGAAATACTAGCAATGGTGCTTCAGAACGTTAGGAAAATACCAACACAACCGGGATCGACCAGTCTGACCACGATAATACCGTCGGACGAGCGAAGCCGCGTGTGCAACATATGCGGCGAGATGTTCACACACTTCTACTTCCTCGAGGAGCATCTGAAAACACACGGCTCGAAAATCGCCTTGGAGGACCTCAACAAGAGCGAAGAGAAGAAGTACATATGTCAAGTATGTAATAAAGGTTTTAAACTGCATTATTACCTGAAATTACATTCGTTTACACACACGAAGGAAAAGCCTTATATTTGTCAGCAGTGTGGAAAGGGCTTTATAACCAAAGGTAAGTTAAAGCGGCATCTAGAAGTACATACGGGATTAAAGAAGTACCAATGTCATGTGTGCTACAAGTTCTTCACGAGGCCCAGTTATTTGCGAATCCATGTGCGGACTATACATGGGACTCAGGACTATAATTTCAGGACGGACAAGCCATGGGAAGGGGCCATGGTCGATCAAGATGGTATTTAG
Protein Sequence: MNNMAMDVDPLSYEYAQYDYSQAPHPNQFYNPNPNFKNETLPHYQYSQIPYEPVIQLDETQQTDIALDNNYNNDQQAYEDDNNDTQMAVNFEPEDVKPDINELNKKKRGRRSSYWNVKVTDKNFAFYGCSICNISFMELEELDKHVSTHKDRITTYGLRVHNQKKKKQMKKEMKRMKKIKMEKKEFKFEVEIKPEDGYIGNEKASDVMHALQENNSTMTDSENLINANSESSTVNNDSNTVKNNNDNNVTNDSNNENLNTANAESSNAINESNTAKNNNKNSAIKDTNNDNKVDTGKKKINSGSKKIDNNKESSSKREIDKQKQDNLQKIYKCFACQKQFLLSYYLRLHVRSHTDEKPYLCTICGQSFITASKRGRHTKRTHLAIRHQCRICYKFFSRFELLTRHFDKKHPDDKLEGEPYDYNAILPYLKELEEQLKEKTEGGDCKPKTEEPWKDQWKEGEAPKEEVKDEEKVPVILKDEAEMKCEFDFPPVPPNIIVSEVKVDVTDNEGVVIKKEVDEEPSEEGGGDDAVGDDHPPDDDARTDGLSDDDYFPSNTWASTPKVESAPPSPVRKRKQKSAKNLICEICNKVVKSKSYLKIHLRTHTGEKPFKCVVCEKGFITATKMHRHVLTQHASTDGAEGGVKLEAASDEENQEGKKGKKKRSKKIKSKFALPKVKEKKKHQKRPHACEFCRLKFLHLETLEIHRKSHEGEPIPYNCYYCLESMGDADALKEHEATHGGPKPFLCTLCGREYKKREAMVFHRKHHKPDKEFVCDICSKRFPSQYKLQRHIATHNLCKYIVRYECPVCAHMFHTKYHIQMHLTTHQKEGLIVEENRNEILAMVLQNVRKIPTQPGSTSLTTIIPSDERSRVCNICGEMFTHFYFLEEHLKTHGSKIALEDLNKSEEKKYICQVCNKGFKLHYYLKLHSFTHTKEKPYICQQCGKGFITKGKLKRHLEVHTGLKKYQCHVCYKFFTRPSYLRIHVRTIHGTQDYNFRTDKPWEGAMVDQDGI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00433372;
90% Identity: iTF_00433372;
80% Identity: -