Dpun014244.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Dendrolimus punctatus
Gene Symbol
-
Assembly
GCA_012273795.1
Location
CM022539.1:7436609-7474241[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 0.00031 0.02 15.7 2.6 1 23 421 443 421 443 0.97
2 20 0.0044 0.29 12.0 0.6 1 20 449 468 449 471 0.94
3 20 2.2e-05 0.0015 19.3 5.6 1 23 490 512 490 512 0.98
4 20 8.9e-06 0.00058 20.5 4.9 1 23 518 540 518 540 0.99
5 20 0.00015 0.0098 16.7 5.7 1 23 546 568 546 568 0.97
6 20 8e-06 0.00052 20.7 7.4 1 23 574 596 574 596 0.97
7 20 8e-07 5.2e-05 23.8 2.9 1 23 602 624 602 624 0.97
8 20 0.00011 0.0071 17.1 6.7 1 23 630 652 630 652 0.97
9 20 6.5e-06 0.00043 21.0 6.4 1 23 658 680 658 680 0.98
10 20 5.2e-07 3.4e-05 24.4 1.9 1 23 686 708 686 708 0.98
11 20 5.3e-05 0.0035 18.1 7.9 1 23 714 736 714 736 0.98
12 20 8.8e-06 0.00057 20.5 7.0 1 23 742 764 742 764 0.98
13 20 1.7e-05 0.0011 19.7 3.7 1 23 770 792 770 792 0.97
14 20 1.9e-05 0.0012 19.5 6.2 1 23 798 820 798 820 0.97
15 20 2.3e-05 0.0015 19.2 7.0 1 23 826 848 826 848 0.97
16 20 1.6e-06 0.0001 22.9 5.9 1 23 854 876 854 876 0.98
17 20 1.8e-05 0.0012 19.6 8.0 1 23 882 904 882 904 0.97
18 20 2e-05 0.0013 19.4 5.8 1 23 911 933 911 933 0.98
19 20 0.00078 0.051 14.4 0.3 1 23 940 962 940 962 0.96
20 20 0.68 44 5.2 5.0 1 23 972 994 972 994 0.98

Sequence Information

Coding Sequence
ATGAATCCAGAGCACCACAGTATAAATACGGGTGGTGGCCAACCTCCGGGAAGTGCTGAGTCTCAGAATCAAAGAGTTCAATCGGCACAGCAACAGTCCAGTCTGCCGCCTACAACTTCTCCGACGGACTTGCGAGTCAACTCGGCTGTTAACGTTGCTTTGTCTAGCGTCGCCAAGTACTGGGTGTTTACAAATCTATTCCCGGGCCCAATTCCACAAGTATCCGTATATGGGTTGCCACCGGGTACCAGGATTGAAAATGGAAAACCTGTGCAGgATATAAGTCAAGCTCATGCCAGTATTCTGAATGGTGATCCAAACATCATACTTGGCCATCATGGAGGGCAACAGCAAGTCACAGTGTCTGCTCCAGGTGGTCAACAGATTCCTGTCACCCAGATTATTGCAACTCAGTCGGGACAGACACATGAAGCATTGGTGGGCCACAGCCAGCAGCAGGAGCTGGGCGGGAGCGCGTCGGCATCAACATCACAGGTGTCAGTGAACCAAAGTCAGCCAACCCACCACCAGGTACCCAATAGTCGGGTCGAATTTGTACACCATAACATTGATATGTCTCATCATTCGCAACAACACATCATGCAGCAGCAGCTAATGGCTGCAACCCGGCCAGAACATGCTAACCAGCAGATACAACTGACTGTCAGTGAAGACGGTACAGTGACCGTGGTGGAGCCGGGAGGCAGCAAGATGGTTGAAAAAGAAGAAATGCATGAGGCAATCAAAATGCCAACTGATCATACACTGACTGTACATCAACTGCAGCAAATTGTTGGACAACAGGTCATAGACAGTGTGGTTCGTATTGAGCAAGCTACAGGAGAACCTGCGAACATCTTGGTAACGCACAACCCCGATGGCACTACCTCAATTGAAGCCAGTGCAGCAGATCCCTTAATTGTTAAAGATGAGAAAAGCGCATCAAAGATCGAAGCCACTGCGCAGTTCGCCATACCTGCAGAAATCAAAGATATTAAAGGCATTGACTTGAAGAGTGTTGGAGCAATGGGTATGGAGGGTGCTGTCGTGAAGATATCTGCGGGCGCGGCTGAGCACGACCTCCACGCGATGTACAAAGTGAACGTTGAGGACCTCTCACAGCTGTTGGCCTACCACGAGGTCTTTGGCAAGTTGAATGCGGAAGGACAACAAGCTCACACCAAGgtGATAAATGAAGTTGAAGTGGAGGCCGGCACCAGCGCCAACGCCATGACAGAGTCGGAGTCGTCTCCAGGACACCATTCCTGCGATCTCTGTGGGAAGATATTCCAATTTCGATACCAACTTATTGTTCACAGACGTTATCATGGTGAGAGCAAGCCTTTTACATGTCAAGTATGTGGCTCTGCCTTTGCAAATCCAGTCGAACTATCAAGACACGGAAAATGCCATCTTGCCGGGGACCCGTCCGAGAGGCACGCGAAGAGGCTGGCCCAAGAGAAGCCCTACGCGTGCACCACTTGCCACAAGACGTTCTCGAGGAAGGAGCACCTCGACAACCACGTGCGCAGCCACACTGGCGAGACGCCCTACAGGTGTGAATACTGCTCGAAGACGTTCACGCGCAAGGAGCACATGGTGAACCACGTGCGGAAGCACACCGGCGAGACGCCGCACCGCTGCGACCTGTGCAAGAAGAGCTTCACGAGGAAGGAGCACTTCATGAACCACGTCATGTGGCACACCGGTGAGACACCGCACCATTGCCAAATATGCGGCAAGAAGTATACTAGGAAGGACCACTTAGTGAACCACATGAGGTCGCATACAAATGATACACCATTCCGATGCGACCTCTGCGGGAAATCGTTCACAAGGAAAGAACACTTCACCAATCACATATTATGGCATACCGGTGAAACCCCGCATCGGTGTGACTTCTGCTCTAAGACTTTCACCCGCAAGGAGCATCTATTGAACCACGTGAGGCAACACACGGGGGAGTCGCCACACCGTTGCAACTATTGTTCCAAATCTTTCACACGACGAGAACATCTCGTTAATCATATCCGACAGCACACGGGCGAAACACCGTTCCAATGCGGATATTGTCCCAAAGCTTTCACTAGGAAGGATCATCtagTGAACCACGTGAGGCAGCATACCGGCGAGTCCCCGCACAAATGCTCGTTTTGCACCAAGTCGTTCACTCGCAAGGAGCACCTCACGAACCACGTGCGCCAGCACACCGGCGAGTCCCCTCATCGGTGTACTTACTGCGCGAAATCGTTCACGAGGAAGGAACACCTCAAGAATCATATCAGACAGCACACGGGCGAAACGCCGCACGAGTGCCCGTTTTGCTCGCGCGCGTTCTCGCGCAAGGCGCACCTCAACAACCACGTCCGACAGCACACCGGCGACATGCCGCACACCTGCTCCTACTGCAGCAAGAGCTTCACCAGGAAGGAGCATCTCGTTAATCACGTACGACAACATACTGGCGAGACGCCGTTTAAATGCACGTACTGTTCGAAGTCGTTCTCTCGCAAGGAACACCTTAACAATCACGTGCATCTGCATACGGGCGAGACGCCGCACAAATGCGCATACTGCACCAAGACATTCTCAAGGAAGGAGCATTTGACCAATCATATCAGGATCCACACGGGTGAGTCGCCGCATCGATGCGAGTTCTGTCAAAAGACGTTCACGCGCAAGGAGCATTTGACGAACCATATGAAGCAGCACACTGGAGATGCAACATCGCACACTTGCAAAATGTGTTCAAAGTCGTTTCCAAAGAAAGAGCATTTGGTGACGCATATGAGATCGCACAGCTGCGGTGAAAGGCCGTTCAGTTGCGGCGAATGCGGCAAGTCCTTCCCGTTGAAGGGCAACCTGCTGTTCCACGAACGGTCGCACAACAAGACTGCTGCTGGCGGACGGCGGTATCGCTGCGACTTGTGCACCAAGGACTTCTGGTGCAAAGGTCACCTGGCGTCGCACCGGCGCACTCACGGCGAGGCCGGCGAAGCACCGGCGAACGCCGACCCGCCCGCGGACGCCGAGGAGTTCAACGACTGCAGCACCAAGTGCGTCAAAATGGAAATCGATGTGCCGCCCATCGTGGAGAGGAAACTCGAACCAAGGGTAACAACAGAGAGCCGGCCGCCAGAGAGTAATATAACTCAATCTCAAAATCCCCAAAACGTACAAACCAATACTACTGTGATGCAAATAACAAGCCagCAAGTCCGCGCGAGTCCGACGACGGGCGCCGCCGCGGTGGCGGGCGGCTCGTTCGCCCACCCGGCCACGGGGCAACATCACGCCGGCACGATCGCCCATCATCCGGTCACGGTTAACTACTAA
Protein Sequence
MNPEHHSINTGGGQPPGSAESQNQRVQSAQQQSSLPPTTSPTDLRVNSAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPPGTRIENGKPVQDISQAHASILNGDPNIILGHHGGQQQVTVSAPGGQQIPVTQIIATQSGQTHEALVGHSQQQELGGSASASTSQVSVNQSQPTHHQVPNSRVEFVHHNIDMSHHSQQHIMQQQLMAATRPEHANQQIQLTVSEDGTVTVVEPGGSKMVEKEEMHEAIKMPTDHTLTVHQLQQIVGQQVIDSVVRIEQATGEPANILVTHNPDGTTSIEASAADPLIVKDEKSASKIEATAQFAIPAEIKDIKGIDLKSVGAMGMEGAVVKISAGAAEHDLHAMYKVNVEDLSQLLAYHEVFGKLNAEGQQAHTKVINEVEVEAGTSANAMTESESSPGHHSCDLCGKIFQFRYQLIVHRRYHGESKPFTCQVCGSAFANPVELSRHGKCHLAGDPSERHAKRLAQEKPYACTTCHKTFSRKEHLDNHVRSHTGETPYRCEYCSKTFTRKEHMVNHVRKHTGETPHRCDLCKKSFTRKEHFMNHVMWHTGETPHHCQICGKKYTRKDHLVNHMRSHTNDTPFRCDLCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNYCSKSFTRREHLVNHIRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCTYCAKSFTRKEHLKNHIRQHTGETPHECPFCSRAFSRKAHLNNHVRQHTGDMPHTCSYCSKSFTRKEHLVNHVRQHTGETPFKCTYCSKSFSRKEHLNNHVHLHTGETPHKCAYCTKTFSRKEHLTNHIRIHTGESPHRCEFCQKTFTRKEHLTNHMKQHTGDATSHTCKMCSKSFPKKEHLVTHMRSHSCGERPFSCGECGKSFPLKGNLLFHERSHNKTAAGGRRYRCDLCTKDFWCKGHLASHRRTHGEAGEAPANADPPADAEEFNDCSTKCVKMEIDVPPIVERKLEPRVTTESRPPESNITQSQNPQNVQTNTTVMQITSQQVRASPTTGAAAVAGGSFAHPATGQHHAGTIAHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01030446;
90% Identity
iTF_00432456;
80% Identity
-