Basic Information

Insect: Dendrolimus pini
Gene Symbol: -
Assembly: GCA_949752895.1
Location: OX457136.1:7490650-7522492[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.00032 0.03 15.7 2.6 1 23 421 443 421 443 0.97

2 20 0.0046 0.44 12.0 0.6 1 20 449 468 449 471 0.94

3 20 2.3e-05 0.0022 19.3 5.6 1 23 490 512 490 512 0.98

4 20 9.3e-06 0.00088 20.5 4.9 1 23 518 540 518 540 0.99

5 20 0.00016 0.015 16.7 5.7 1 23 546 568 546 568 0.97

6 20 8.3e-06 0.00079 20.7 7.4 1 23 574 596 574 596 0.97

7 20 8.3e-07 7.9e-05 23.8 2.9 1 23 602 624 602 624 0.97

8 20 0.00011 0.011 17.1 6.7 1 23 630 652 630 652 0.97

9 20 6.8e-06 0.00064 21.0 6.4 1 23 658 680 658 680 0.98

10 20 5.4e-07 5.1e-05 24.4 1.9 1 23 686 708 686 708 0.98

11 20 5.5e-05 0.0052 18.1 7.9 1 23 714 736 714 736 0.98

12 20 9.2e-06 0.00087 20.5 7.0 1 23 742 764 742 764 0.98

13 20 1.8e-05 0.0017 19.7 3.7 1 23 770 792 770 792 0.97

14 20 2e-05 0.0018 19.5 6.2 1 23 798 820 798 820 0.97

15 20 2.4e-05 0.0023 19.2 7.0 1 23 826 848 826 848 0.97

16 20 1.7e-06 0.00016 22.9 5.9 1 23 854 876 854 876 0.98

17 20 1.9e-05 0.0018 19.6 8.0 1 23 882 904 882 904 0.97

18 20 2.1e-05 0.002 19.4 5.8 1 23 911 933 911 933 0.98

19 20 0.00081 0.077 14.4 0.3 1 23 940 962 940 962 0.96

20 20 0.71 67 5.2 5.0 1 23 972 994 972 994 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.00032	0.03	15.7	2.6	1	23	421	443	421	443	0.97
2	20	0.0046	0.44	12.0	0.6	1	20	449	468	449	471	0.94
3	20	2.3e-05	0.0022	19.3	5.6	1	23	490	512	490	512	0.98
4	20	9.3e-06	0.00088	20.5	4.9	1	23	518	540	518	540	0.99
5	20	0.00016	0.015	16.7	5.7	1	23	546	568	546	568	0.97
6	20	8.3e-06	0.00079	20.7	7.4	1	23	574	596	574	596	0.97
7	20	8.3e-07	7.9e-05	23.8	2.9	1	23	602	624	602	624	0.97
8	20	0.00011	0.011	17.1	6.7	1	23	630	652	630	652	0.97
9	20	6.8e-06	0.00064	21.0	6.4	1	23	658	680	658	680	0.98
10	20	5.4e-07	5.1e-05	24.4	1.9	1	23	686	708	686	708	0.98
11	20	5.5e-05	0.0052	18.1	7.9	1	23	714	736	714	736	0.98
12	20	9.2e-06	0.00087	20.5	7.0	1	23	742	764	742	764	0.98
13	20	1.8e-05	0.0017	19.7	3.7	1	23	770	792	770	792	0.97
14	20	2e-05	0.0018	19.5	6.2	1	23	798	820	798	820	0.97
15	20	2.4e-05	0.0023	19.2	7.0	1	23	826	848	826	848	0.97
16	20	1.7e-06	0.00016	22.9	5.9	1	23	854	876	854	876	0.98
17	20	1.9e-05	0.0018	19.6	8.0	1	23	882	904	882	904	0.97
18	20	2.1e-05	0.002	19.4	5.8	1	23	911	933	911	933	0.98
19	20	0.00081	0.077	14.4	0.3	1	23	940	962	940	962	0.96
20	20	0.71	67	5.2	5.0	1	23	972	994	972	994	0.98

Sequence Information

Coding Sequence: ATGAATCCAGAGCACCACAGTATAAATACGGGTGGTGGCCAACCTCCGGGAAGTGCTGAGTCTCAGAATCAAAGAGTTCAATCGGCACAGCAACAGTCCAGTCTGCCGCCTACAACTTCTCCGACGGACTTGCGAGTCAACTCGGCTGTTAACGTTGCTTTGTCTAGCGTCGCCAAGTACTGGGTGTTTACAAATCTATTCCCGGGCCCAATTCCACAAGTATCCGTATATGGGTTGCCACCAGGCACCAGGATCGAAAATGGAAAACCCGTGCAGGATATAAGTCAAGCTCATGCCAGTATTCTGAATGGTGATCCAAACATCATACTCGGGCATCATGGAGGGCAACAGCAAGTCACAGTGTCCGCTCCAGCGGGTCAACAGATTCCCGTCACCCAGATTATTGCAACTCAGTCGGGCCAGACACATGAAGCATTGGTGGGCCACAGCCAGCAGCAGGAACTGGGCGGGAGCGCGTCGGCATCAACGTCACAGGTGTCAGTGAACCAAAGTCAGCCAACCCACCACCAGGTACCCAATAGTCGGGTCGAATTTGTACACCATAACATTGATATGTCTCATCATTCGCAACAACACATCATGCAGCAGCAGCTAATGGCTGCAACCCGGCCAGAACACGCTAACCAGCAGATACAACTGACTGTCAGTGAAGACGGTACAGTGACAGTGGTGGAGCCGGGAGGCAGCAAGATGGTTGAAAAAGAAGAAATGCATGAGGCAATCAAAATGCCAACTGATCATACACTGACTGTACATCAACTGCAGCAAATTGTTGGACAACAGGTCATAGACAGTGTGGTTCGTATTGAGCAAGCTACAGGAGAACCTGCAAACATCTTGGTAACGCACAACCCCGATGGCACTACCTCGATTGAAGCCAGTGCAGCAGATCCCTTAATTGTTAAAGATGAGAAAAGCGCATCAAAGATCGAAGCCACTGCACAGTTTGCCATACCTGCAGAAATCAAAGATATTAAAGGCATTGACTTGAAGAGTGTTGGAGCAATGGGTATGGAGGGTGCTGTCGTGAAGATATCTGCGGGCGCCGCTGAGCATGACCTCCATGCGATGTACAAAGTGAATGTTGAGGACCTCTCACAGCTGTTGGCCTACCATGAGGTCTTTGGCAAGTTGAATGCGGAAGGACAACAAGCTCACACCAAGGTGATAAATGAAGTTGAAGTGGAGGCCGGCACCAGCGCCAACGCCATGACAGAGTCGGAGTCGTCTCCAGGACACCATTCCTGCGATCTTTGTGGGAAGATATTCCAATTTCGGTATCAACTTATTGTTCACAGACGTTATCATGGTGAGAGCAAGCCTTTTACATGTCAAGTATGTGGCTCTGCCTTTGCAAACCCAGTCGAACTATCAAGACACGGAAAATGCCATCTTGCCGGGGACCCGTCCGAGAGGCACGCGAAGAGGCTGGCCCAGGAGAAGCCCTACGCGTGCACCACTTGCCACAAGACGTTCTCGAGGAAGGAGCACCTCGACAACCACGTGCGCAGCCACACTGGCGAGACGCCCTACAGGTGTGAATACTGCTCGAAGACGTTCACGCGCAAGGAGCACATGGTGAACCACGTGCGGAAGCACACCGGCGAGACGCCGCACCGCTGCGACCTGTGCAAGAAGAGCTTCACGAGGAAGGAGCACTTCATGAACCACGTCATGTGGCACACCGGTGAGACACCGCACCATTGCCAAATATGCGGCAAGAAGTATACTAGGAAGGACCACTTAGTGAACCACATGAGGTCGCATACAAATGATACACCATTCCGATGCGACCTCTGCGGGAAATCGTTCACAAGGAAAGAACACTTCACCAATCACATATTATGGCATACCGGTGAAACCCCGCATCGGTGTGACTTCTGCTCCAAGACTTTCACTCGCAAGGAGCATCTATTGAACCACGTGAGGCAACACACAGGGGAGTCGCCACACCGGTGCAACTATTGTTCCAAATCTTTCACACGACGAGAACATCTCGTTAATCATATCCGACAACACACGGGCGAAACACCGTTCCAATGCGGATATTGTCCCAAAGCTTTCACTAGGAAGGATCATCTagTGAACCACGTTAGACAGCATACCGGCGAGTCCCCGCACAAATGCTCGTTTTGCACCAAGTCGTTCACTCGCAAGGAGCATCTCACGAACCACGTGCGCCAACACACTGGCGAATCCCCTCATCGGTGTACTTACTGCGCGAAATCATTCACGAGGAAGGAACACCTCAAGAACCATATCAGACAGCACACGGGCGAAACGCCGCACGAGTGCCCGTTTTGCTCGCGCGCGTTCTCACGCAAGGCGCACCTCAACAACCACGTCCGACAGCACACCGGCGACATGCCGCACACCTGCTCCTACTGCAGCAAGAGCTTCACCAGGAAGGAGCATCTCGTTAATCACGTACGACAACATACTGGCGAGACGCCGTTTAAATGCACGTACTGTTCGAAGTCGTTCTCTCGCAAGGAACACCTTAACAATCACGTGCATCTGCATACGGGCGAGACGCCGCACAAATGCGCATACTGCACCAAGACATTCTCAAGGAAGGAGCATTTGACCAATCATATCAGgATCCATACGGGTGAATCGCCGCATCGATGCGAGTTCTGTCAAAAGACGTTCACGCGCAAGGAGCACTTGACGAACCATATGAAGCAGCACACTGGAGATGCAACATCACACACTTGCAAAATGTGTTCAAAGTCATTTCCAAAGAAAGAGCATTTGGTGACGCATATGAGATCGCACAGCTGCGGTGAAAGGCCGTTCAGTTGCGGCGAATGCGGCAAATCCTTCCCGTTGAAGGGCAACCTGCTGTTCCACGAACGGTCGCACAACAAGACTGCTGCTGGCGGACGGCGGTATCGCTGCGACTTGTGCACCAAGGACTTCTGGTGCAAAGGACACCTGGCGTCGCACCGGCGCACTCACGGCGAGGCCGGCGAAGCACCGGCGAACGCCGACCCGCCCGCGGACGCCGAGGAGTTCAACGACTGCAGCACCAAGTGCGTCAAAATGGAAATCGAGGTGCCGCCCATCGTGGAGAGGAAACTCGAACCAAGGGTAACAACAGAGAGCCGGCCGCCAGAGAGTAATATAGCTCAATCTCAAAATCCCCAAAACGTACAAACCAATACTACTGTGATGCAAATAACAAGCCagCAAGTCCGTGCGAGTCCGACGACGGGcgccgccgcggtggcgggcgGCTCGTTCGCCCACCCGGCCACGGGGCAACATCACGCCGGCACGATCGCCCATCATCCGGTGACGGTTAACTACTAA
Protein Sequence: MNPEHHSINTGGGQPPGSAESQNQRVQSAQQQSSLPPTTSPTDLRVNSAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPPGTRIENGKPVQDISQAHASILNGDPNIILGHHGGQQQVTVSAPAGQQIPVTQIIATQSGQTHEALVGHSQQQELGGSASASTSQVSVNQSQPTHHQVPNSRVEFVHHNIDMSHHSQQHIMQQQLMAATRPEHANQQIQLTVSEDGTVTVVEPGGSKMVEKEEMHEAIKMPTDHTLTVHQLQQIVGQQVIDSVVRIEQATGEPANILVTHNPDGTTSIEASAADPLIVKDEKSASKIEATAQFAIPAEIKDIKGIDLKSVGAMGMEGAVVKISAGAAEHDLHAMYKVNVEDLSQLLAYHEVFGKLNAEGQQAHTKVINEVEVEAGTSANAMTESESSPGHHSCDLCGKIFQFRYQLIVHRRYHGESKPFTCQVCGSAFANPVELSRHGKCHLAGDPSERHAKRLAQEKPYACTTCHKTFSRKEHLDNHVRSHTGETPYRCEYCSKTFTRKEHMVNHVRKHTGETPHRCDLCKKSFTRKEHFMNHVMWHTGETPHHCQICGKKYTRKDHLVNHMRSHTNDTPFRCDLCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNYCSKSFTRREHLVNHIRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCTYCAKSFTRKEHLKNHIRQHTGETPHECPFCSRAFSRKAHLNNHVRQHTGDMPHTCSYCSKSFTRKEHLVNHVRQHTGETPFKCTYCSKSFSRKEHLNNHVHLHTGETPHKCAYCTKTFSRKEHLTNHIRIHTGESPHRCEFCQKTFTRKEHLTNHMKQHTGDATSHTCKMCSKSFPKKEHLVTHMRSHSCGERPFSCGECGKSFPLKGNLLFHERSHNKTAAGGRRYRCDLCTKDFWCKGHLASHRRTHGEAGEAPANADPPADAEEFNDCSTKCVKMEIEVPPIVERKLEPRVTTESRPPESNIAQSQNPQNVQTNTTVMQITSQQVRASPTTGAAAVAGGSFAHPATGQHHAGTIAHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01030446;
90% Identity: iTF_00433345;
80% Identity: -