Basic Information

Insect: Dendrolimus pini
Gene Symbol: -
Assembly: GCA_949752895.1
Location: OX457150.1:11144822-11164645[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.00045 0.042 15.2 1.3 1 23 271 294 271 294 0.97

2 18 2.8e-05 0.0026 19.0 1.7 1 23 299 321 299 321 0.99

3 18 6.1 5.8e+02 2.2 0.4 3 23 326 346 325 346 0.90

4 18 0.026 2.4 9.7 0.5 1 23 353 376 353 376 0.93

5 18 0.0025 0.24 12.9 0.1 2 23 440 462 439 462 0.95

6 18 8.2e-05 0.0077 17.6 0.6 1 23 468 491 468 491 0.94

7 18 0.33 31 6.2 0.3 3 19 497 513 496 515 0.91

8 18 7.6 7.1e+02 1.9 1.9 1 23 524 547 524 547 0.86

9 18 0.092 8.7 8.0 0.6 1 23 552 575 552 575 0.93

10 18 0.35 33 6.1 0.2 3 23 589 609 587 609 0.95

11 18 0.011 1 10.9 1.8 1 23 615 637 615 637 0.98

12 18 0.00038 0.036 15.5 4.3 1 23 672 694 672 694 0.97

13 18 0.047 4.5 8.9 0.1 2 23 699 720 699 720 0.94

14 18 0.003 0.28 12.6 0.1 2 23 738 760 737 760 0.95

15 18 9e-05 0.0085 17.4 2.0 1 23 766 788 766 788 0.98

16 18 0.00081 0.076 14.4 5.7 2 23 795 816 794 816 0.96

17 18 0.0036 0.34 12.4 0.7 1 23 822 845 822 845 0.92

18 18 0.27 26 6.5 1.8 3 23 852 873 851 873 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.00045	0.042	15.2	1.3	1	23	271	294	271	294	0.97
2	18	2.8e-05	0.0026	19.0	1.7	1	23	299	321	299	321	0.99
3	18	6.1	5.8e+02	2.2	0.4	3	23	326	346	325	346	0.90
4	18	0.026	2.4	9.7	0.5	1	23	353	376	353	376	0.93
5	18	0.0025	0.24	12.9	0.1	2	23	440	462	439	462	0.95
6	18	8.2e-05	0.0077	17.6	0.6	1	23	468	491	468	491	0.94
7	18	0.33	31	6.2	0.3	3	19	497	513	496	515	0.91
8	18	7.6	7.1e+02	1.9	1.9	1	23	524	547	524	547	0.86
9	18	0.092	8.7	8.0	0.6	1	23	552	575	552	575	0.93
10	18	0.35	33	6.1	0.2	3	23	589	609	587	609	0.95
11	18	0.011	1	10.9	1.8	1	23	615	637	615	637	0.98
12	18	0.00038	0.036	15.5	4.3	1	23	672	694	672	694	0.97
13	18	0.047	4.5	8.9	0.1	2	23	699	720	699	720	0.94
14	18	0.003	0.28	12.6	0.1	2	23	738	760	737	760	0.95
15	18	9e-05	0.0085	17.4	2.0	1	23	766	788	766	788	0.98
16	18	0.00081	0.076	14.4	5.7	2	23	795	816	794	816	0.96
17	18	0.0036	0.34	12.4	0.7	1	23	822	845	822	845	0.92
18	18	0.27	26	6.5	1.8	3	23	852	873	851	873	0.96

Sequence Information

Coding Sequence: ATGGATGATCCACAATCAAAAACAGACCTCAAAAATGTTGAATGGCTGAAAACAAAGTTAAGCAGAGTCTGGAACTCTACTAAAGTATGTGGAATGTGCCTTGAAGAGCGTGACAACTTGTGCCCTCTTAACATGGAATTTGTAATTAGCAAGCAAAAGTCATCTAAGTCATTTGTGGATTTGTTAAATTATGTTTTCAATGAGGATATCGAAAATTTAGTGACTGGTACCGGAGTATGCGAAAATTGTACAGAAAAAGCCCTACAagcttacatatttataaacaatactAGACAAATATCTCGCGTTATAAATGATTGTGTTAATGATATTTACTCAAAAGTGGTTGATCTGTCTGAACAGTTAGATGACACAATTGACTGTGAAAATGCTAATATAATGATTGTTCTAGAATCAGAGCCTCAATTATACGATATTATAGATGATCTGACTAATATGGAAATAATGCCTACAAATTCAcctaaaatattaaagaaagaaGATAATGTCTATTCAGAAGAAAAGAAAGACATGATTTCTACAAACTCAGATAATTCAGAAACAACAGATGATTTAACAACAAATACTGTACAAGAAAGTAATACAGCAACAAATGTAATCAAAGCAAATGATATTATAACTAGTATTACAAACActaatagtataaaaaattattatagcaGAAACTTACAAACTGTAAAGAAGCAACCAAAAATCAATGTACAACCAGAAATATACCTTAAAGGTGGTAATATAGTAATCAATCCTATAAACACAAATAATTCACCATCAAGTCTCATCATTAATACCTATAAATGTTCTGAATGTACTGAAATTTTCACATCATACAGAGCATTGAAGGAACACGAAAAATctaaacataaagaaaaaatttaccAATGCAGTATctgtaacaaaatatataacacattacaatatctaaatatacattataaGACACATTTGAAGTCTATATGCAAGATATGTCGTTTAGTGTTACCAGAGACTAAACTGATGGAGCATTTACGTACAAAACATGCAACGGCAATACAAATACATCCTTGCAAATTTTGCGACCTAGTCTATTATTCTGAAGAAGCTTTAGAAACACATTTCAAAGCTATTCACTTGAGAAATTGCACTGAGACAGAAGAAACTAAAAATCAGTGTCCAATGTGTTTAAGAAATATACGGCATAGTGAAGACAAAAGACACAAATGCAAGTTTCAGTGTTCGGAGTGTTTTGTTAATCCGTGTATACATTATCGGTATCTAACCAAATATCGGGAAGAAATTTTACGTCACTCAAATACTATTTCGTGTGTTGATTGTGATTATGTTACTAAAAGGAAGGAATATTTGATCATTCATGCAAACCGTGAACATTTAAATCATCATCCCTTCATTTGTAATGATTGTGGTACACAATTCTATACTAAGATGAGTTTACGCATACATATTGAGCAATATCACAGcactttaaatatttgtgaATATTGCGATTTGGAATTTAAGAAAAGTACGAAAATTAAGGAACATAAGGAAGCTTGCAAGAAGTTGGTTAGACCTCATCCTTGCAAACAATGTGTTGCAACATTTGATTGCGAAGAAGAATTAACTAATCATGAAAATCTAAGACATAATGATGTCGGATTTTCCTGTCATATGTGCCAAAGAAGGTTTTTGAATATGATTGAATTGGAAGAACATATAGTTTCAATACACAGACAAATACAGTGCAAGAAACGTCGGAAAAACATAGACTGTACATTATGCAATATAAAGTTTAACAGTGTTAAAGAGATGCTAGAACACGAAAGTATGCACAGCCCAGATGATAAGTATCCATGCAAAGTGTgtttaaaagaattttattcACTGAAAAAGCTATATATTCACAAACAAAGGCATTATGAGAGAATACAGTGTGGTGGATGTAAGAAACGAGTGATCACGTCATTCTATCCACAACACGAAGTACGTTGTCCATATAAACGAAATGCAACATTGACTCATATGTGTGAAACATGCGGAAAATCTTTCCATTTGGAATCACTACTACGTTTACATCAAAAAACTCATTCAAAGTCCGAGGAATGTGCTGAATGTGGCAAGATGCTTAAACCGTCCGGTCTTTTAAGGCATTTGGAGAAAGTTCACAACATAAAAGAACCAAATTCTAAAAAACGGTATGCACAGAAAGGACGGTTATCTTGCAATGATTGTGGGTATTCAGCAAAAAGAAAGTGGGTTTTAGAAGCACATGTGAACAGATATcatttaaaagtgaaaccattTGTTTGTAATATATGCAAAAAAGAATTTTGCGGGAAAAGTAGATTGAGCGAACACATGGCAACACATTCAAATACGAATACATGCTATTGTTCTGTGTGTGGCAAGAAATTTGCTAACAAGGTTTGCTTGAAATTGCATTTTAGAATGCATACAGGCGAAACGCCATACGCATGTGATATTTGTGGCGAGAAATTCCGTACTTCAAGTATAATGAAGACTCATAGAGTAAAGAAACACTTACACAAGACTGTTGCTTGTCCAATGTGCGACAGTATGTTTTACATGGCCAGAGATATGAGACACCATTTTAAGAAAACACACTGGAAACACAAAGACAAGCCGTTTGACGTAAAGGAAGTGTTGCCAGAAGAATATTACCATTTATTTGAAGACGGACGAATGGCAAAGATTACAGATGAGGTCATTGAAACTGAAGTGGTCAAGTGCGTCAAGTGCCTGGGCGACCACGGGACCTCGGAGTGCACTCGCACCCGGGACTCCCCAGAGCCACCGAGCTGCATCCTCTGCGGCCAAGCGGGCCACCCCGCTAACTACAGAGGCTGCCCTGCTGCCCCCCGACCCAAACGCAAGGTCGGAAAGGGCAATGCCCAAAAAGGCACTAGAAAAGTGCCGAACAAACCCGCATTCGTGGCCGCCCCTCCTCCAGTTGTAAACCACTGGACGGGTCTTCCCACGACGGAAGCCTTTCCTCCGCTAAGGACGCGTGCCCCAGTAATGGCCAACCTTCCCCTGGCCACCCTCGCCCCCGCCTCTATTTctaagACATACGGGAGACTACTGAAGGGTAGCCATGAACAAGCATTGTTTGTGTTGGCCAAAGCAGCGCAGGAAGAAGGAATGAAGTGTAAAAGAGAAGCCCTTGAGTGA
Protein Sequence: MDDPQSKTDLKNVEWLKTKLSRVWNSTKVCGMCLEERDNLCPLNMEFVISKQKSSKSFVDLLNYVFNEDIENLVTGTGVCENCTEKALQAYIFINNTRQISRVINDCVNDIYSKVVDLSEQLDDTIDCENANIMIVLESEPQLYDIIDDLTNMEIMPTNSPKILKKEDNVYSEEKKDMISTNSDNSETTDDLTTNTVQESNTATNVIKANDIITSITNTNSIKNYYSRNLQTVKKQPKINVQPEIYLKGGNIVINPINTNNSPSSLIINTYKCSECTEIFTSYRALKEHEKSKHKEKIYQCSICNKIYNTLQYLNIHYKTHLKSICKICRLVLPETKLMEHLRTKHATAIQIHPCKFCDLVYYSEEALETHFKAIHLRNCTETEETKNQCPMCLRNIRHSEDKRHKCKFQCSECFVNPCIHYRYLTKYREEILRHSNTISCVDCDYVTKRKEYLIIHANREHLNHHPFICNDCGTQFYTKMSLRIHIEQYHSTLNICEYCDLEFKKSTKIKEHKEACKKLVRPHPCKQCVATFDCEEELTNHENLRHNDVGFSCHMCQRRFLNMIELEEHIVSIHRQIQCKKRRKNIDCTLCNIKFNSVKEMLEHESMHSPDDKYPCKVCLKEFYSLKKLYIHKQRHYERIQCGGCKKRVITSFYPQHEVRCPYKRNATLTHMCETCGKSFHLESLLRLHQKTHSKSEECAECGKMLKPSGLLRHLEKVHNIKEPNSKKRYAQKGRLSCNDCGYSAKRKWVLEAHVNRYHLKVKPFVCNICKKEFCGKSRLSEHMATHSNTNTCYCSVCGKKFANKVCLKLHFRMHTGETPYACDICGEKFRTSSIMKTHRVKKHLHKTVACPMCDSMFYMARDMRHHFKKTHWKHKDKPFDVKEVLPEEYYHLFEDGRMAKITDEVIETEVVKCVKCLGDHGTSECTRTRDSPEPPSCILCGQAGHPANYRGCPAAPRPKRKVGKGNAQKGTRKVPNKPAFVAAPPPVVNHWTGLPTTEAFPPLRTRAPVMANLPLATLAPASISKTYGRLLKGSHEQALFVLAKAAQEEGMKCKREALE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00433408;
90% Identity: iTF_00433408;
80% Identity: -