Dpin029335.2
Basic Information
- Insect
- Dendrolimus pini
- Gene Symbol
- zfy1
- Assembly
- GCA_949752895.1
- Location
- OX457150.1:9987010-9989031[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 5e-05 0.0047 18.2 4.8 1 23 53 76 53 76 0.98 2 18 3.4e-05 0.0032 18.8 1.1 1 23 85 108 85 108 0.96 3 18 0.004 0.38 12.2 0.7 2 23 121 143 121 143 0.97 4 18 0.01 0.99 10.9 3.3 1 23 152 175 152 175 0.96 5 18 0.0063 0.59 11.6 3.7 1 23 187 210 187 210 0.97 6 18 3.1e-05 0.0029 18.9 0.6 2 23 243 265 242 265 0.97 7 18 0.00014 0.013 16.8 1.2 2 23 275 297 274 297 0.96 8 18 0.019 1.8 10.1 1.9 2 19 302 319 301 322 0.92 9 18 0.0035 0.33 12.4 0.3 2 21 327 346 327 349 0.94 10 18 0.0019 0.18 13.2 1.4 3 23 359 380 358 380 0.96 11 18 0.00015 0.014 16.7 4.3 1 23 385 408 385 408 0.94 12 18 9.3e-05 0.0088 17.4 0.7 2 23 420 442 419 442 0.95 13 18 0.018 1.7 10.2 0.5 1 23 471 494 471 494 0.92 14 18 0.31 29 6.3 0.2 2 23 501 521 500 521 0.94 15 18 0.0029 0.27 12.7 1.5 2 23 528 549 527 549 0.97 16 18 1.1 1e+02 4.6 1.0 3 23 557 579 555 579 0.88 17 18 0.0055 0.52 11.8 0.2 1 23 615 637 615 637 0.97 18 18 0.17 16 7.1 2.0 1 23 643 666 643 666 0.96
Sequence Information
- Coding Sequence
- ATGATGATGGAAACTGCAAATGACGACGACAGTGTACCAGAGCCTGAAGTCAAAATAGAAAAAGAGAATAAGGAAGCTCTCCTTCTGACATTTGAAAGTGTTATCAATGAGGGCCTTGAAAGTGCAACAGAAATAGCTCCTCGTAACACACATAATTATATGTGCAAAGTTTGCCATCTAGTCTTCAAATCCTCCAAAACCTTGCGTATGCACCAACGAAGGAAGCACAAATCCTTTAGGAAGCATTTTGCCCACATTTGTGATTATTGTGGCATGTCTTATGAAACAAAGAACAGTTTAGTCGCTCATATCAAGAGAAAGCATGGACCGAATGTTGAACCAGAAGATCTTGAAGAGCGTACATGTGACATATGCGCTTTAGTTTTTAAAGGGATGTCCAGATTAAGAATGCATATGCGTAGAAAACATGGTTCTTTCAAAGAATCGTTTCAGCATATTTGTGAGGAATGTGGTCTGACATATGAAAAACATAGAAGTTTGATCGTTCACAAGAAAAGAAAACATTCAAAGATTGCACAACCTAGACTGAATCAATGGTACCATTGTCTTTTCTGcccaaaaatatttacaaaacgtGAAACGTATGTTAGACATGTGCAAAGGAAACACAAGATATCTGAAGAAGAAACAATGAATACTATTAAAGAGAGAAATCTTACTGCGGAGTACTTAGACAGTTGTATTAATGCTACCACTGGAGAAATAACCTGTAAAGAGTGTCCTCTAGTCTTTTCTTCTGTGAATTACTTAAAACTTCACATGAGACGAAAGCATAATGCACTTAGAGAAGCCTTCAGACTCAAGTGCAAAGTCTGTAATTTATCCTACGACAGAGTTGAGAGCTTAAAACGTCATGTCAGGAGAAAACATGATAACAGCACATATTGCAACTACTGTAAAAAACACTTTGACACGAGAGAAGCATATATAAGTCATTCGCATGTGAAGTCTATAAGGGAGTGTTCAATTTGTGGTTTAATTTTTGCTTCTAAGGGAGGTCTAGGTAAACACTTGAGGTGTGCTCACAAAATTGAGACCCAAAAGACGGTTTTCTGCAAAATATGCAACGAAGGCTTCAACGATAAAAAGCATTTGAGACCACACATCCTAAGAGTGCATTTAAAGATGTCATTTACCTgtaatttttgcaataaaatctttaaatctAAGGAAAGTTTCAGAAAGCATGTCATGTTCAAGCACAAGGCGGAAAATCCGTTTGAGAGCCAAACACAGACTTGTGATTACTGCAGCAAAGTTTTCAAAGATGAATTTGAACTATCCAGGCACTTTAATATAGAGCACAACGGCTCAACTAAATCGGAGAATTTTACTGTCCCAAAACTTTTGGAAATTAAGAAGGAAGAAGAAGTGGAATTAAGAACTTCGTTTCAATGTACGAAATGTCCTGACGAGTATGACTCGTGGGAGAATCTTAAACTGCATTTCGAGCAGAATCACCGAATGTTTGATGACACTCAGTGTCAGATATGCGGTGAATTGGTTCGCGGGAATGAATTGGAGAAACACATAAAGAACCACAATATTTTAGAAGAAGTGCAATGTAGATACTGTGAATTCAAGACGAACCAGCGAGTGAGCTTAACGCAGCATATGTTGAGACATAAAAATGCTACTACGTTAAACTGTGACTTTCCACTATGCAAGTACAAGACATTCTATGAAGATGCAATGATGAAGCACAGACGTAAACATGAAGATCAGGGTGTTAAGCTTCAATGTACGCAGTGTCCCTTTCAAACaatgaataaatacatattgAAGTACCACGAAGAAGCTCATGTTACTGGGAAGAAGAGATACAAGTGTGACCAGTGTGATTATGCGACAATATTGCCAGCTAACCTCGTTCAGCACAAATACAAGCATTCATCAGAGAAAAGGTTCAAATGTGAAGTGTGTCCATTTGCAACCAAATACAATACGTCACTGCGTTTCCATGTTAAGAAGAAGCATTGTGATCTTCCTACATTCAGTTAA
- Protein Sequence
- MMMETANDDDSVPEPEVKIEKENKEALLLTFESVINEGLESATEIAPRNTHNYMCKVCHLVFKSSKTLRMHQRRKHKSFRKHFAHICDYCGMSYETKNSLVAHIKRKHGPNVEPEDLEERTCDICALVFKGMSRLRMHMRRKHGSFKESFQHICEECGLTYEKHRSLIVHKKRKHSKIAQPRLNQWYHCLFCPKIFTKRETYVRHVQRKHKISEEETMNTIKERNLTAEYLDSCINATTGEITCKECPLVFSSVNYLKLHMRRKHNALREAFRLKCKVCNLSYDRVESLKRHVRRKHDNSTYCNYCKKHFDTREAYISHSHVKSIRECSICGLIFASKGGLGKHLRCAHKIETQKTVFCKICNEGFNDKKHLRPHILRVHLKMSFTCNFCNKIFKSKESFRKHVMFKHKAENPFESQTQTCDYCSKVFKDEFELSRHFNIEHNGSTKSENFTVPKLLEIKKEEEVELRTSFQCTKCPDEYDSWENLKLHFEQNHRMFDDTQCQICGELVRGNELEKHIKNHNILEEVQCRYCEFKTNQRVSLTQHMLRHKNATTLNCDFPLCKYKTFYEDAMMKHRRKHEDQGVKLQCTQCPFQTMNKYILKYHEEAHVTGKKRYKCDQCDYATILPANLVQHKYKHSSEKRFKCEVCPFATKYNTSLRFHVKKKHCDLPTFS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00948130;
- 90% Identity
- iTF_00433361;
- 80% Identity
- iTF_00432474;