Dpin001367.1
Basic Information
- Insect
- Dendrolimus pini
- Gene Symbol
- egg_1
- Assembly
- GCA_949752895.1
- Location
- OX457124.1:25788150-25825733[+]
Transcription Factor Domain
- TF Family
- MBD
- Domain
- MBD domain
- PFAM
- PF01429
- TF Group
- Unclassified Structure
- Description
- The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.66 3.9e+03 -1.5 0.0 25 50 435 460 428 462 0.80 2 3 3.8 2.2e+04 -3.9 0.0 29 38 2134 2143 2106 2144 0.69 3 3 3.6e-14 2.1e-10 41.0 0.0 4 75 2175 2239 2172 2241 0.90
Sequence Information
- Coding Sequence
- ATGAGTTCAGAATTAAAACTAGAAGACACCTCAATTAAGTGTGTTAACGACACGAACAAATCGAATGTCCAAGCTGATGAAGATGGTGAGTCTGATGGATATACCAAGGAAAATTCAGAAGACATAGAAGAGCAATCAACAATTATCAAAAGTTTCAATGAGGAAAACAGTCACTTAAGTGATAAAAATCCATCTGAAATTGATGTACAACAATCTAATGTAAAACAAGATGTAGATTCATTAGataaaaataagtatgcaaTCAACAGACAAAATAAAGTTATAGAAAGTACCAAGTGTATGGATGAAGGAATTGACTCCCAAGAAGAATTTTTACTAAGATGGGATGATGATAATGAAAATGAAGATGTGAAGTATGATGAAATTGGAATTGATGAAGATGCTCTCCTATCTGTTAAAGATGACACTGAAAATGAAGAATTTCCACATGAGTCAAGTGAgaaaaatgataatattatgtTGGTGGATAATGCAACTCAAAAACTCTTAACAGAATCATTTAGAGCTACTGATGAACATGTAGTTGAATTAGGCAGTACCAAAGTTGAGGTGCCAAATATGGTACCCGATATAGATAAGAAATCTCAAATAACTGATAACAATTGCCAAGAAAATATTCGTAAATTAATACCAGCAGCTAAGACTGTAGGTGATATTGATAACTTACAAGCTGGAGACCTTTCcttattacaagttcaaaaTAAGAGTATGAATATAGAGGAAAAAGTAAATGTCACTAAtattagtgaatttaaaaaagagctAGAAACTGACAGTTGTGATGTTCTTTATCAAAATATAACTAATGAAATAGCATGTGGTTCAGTTCCTCAGGAACAAGTTAAACCAGTCAGTACCGTTAGTAAAATAGAAAGCAATATAGATAATGAAGTAATTAGCTCTGTTGTTGACAGTAGCAAAACCTCAGAAAACACCATAATGTCTGACTATGTTGAAAGTATGATTCTGGATGAAGTTACTGAAAATACTTCTAAAGTTCATAATtgttcaacaaatcaaattgtTGATGAAGAGTTTAATATTTCAGAAAGTATTAATAATGATCAAACTCAGGTTCAGAGtgagtataatatatatatgacagGGATAGTGACTGAAGGTGATTCCAAAACTGTCGACACTAATACTACCTCTGATAATACTGTTAAAAGCacaaataacattaatttaaaagcaACATTTTCTTGTTCAGACACAAATGAACCTAAAACTATAGAAGTAatagatattaaaaatgtaactgaAACAAAATCAGAAAATGCGACAGAAAATAATACAGAGAAAATATTTCTAGTTGATCCACAGAAAAATACAATAAGTACGAAAGAAGAAGTTAAGTCATTGGATATTCATGATTTAAACTTGTGTATAACTCCTGAAATTAAAACAGATCATGCTATAAACAAACCAGATATCATGTTGGAAATCCCTACTCAAGAGCTTATTGATATAGACAATAATGATTCAACACTTGAACAAGACATTTCTTTAGACATGGAATCACAGTTATTAAACAAAGTGGATGATAATTTTCTTCATAATGATAGTCCAGTGTCTTCAATCAGCAATGAAGATATGTCTATAGATAAAATCATTCTAAGTCTTGATGATGACAATGACAATGTAGAAGAATCTCATAaagataatttttcaataaGTTCTAATTTAGAAGGGGGAAACGTACAAAAAGAATCTAAACTAAATGAAAATCCAGtagaaatttcaaataaaaatgttgaaataCAAGACGTTTTGactgaaaatattaaatccaataacataaatgacaatataacatcaacaaaaacaaatagaaataaaaactcAACTGAAATAGTTATGGAGAGTTTTAAGATGTTATCTGACACTCCAATGTACGATGTATCTAAACAATCAGAGGTAGAAAACAAACCTAGTaagtattactattattatgatGATACAGATGCTCAACCAGTTGAAGTTAATTCAAGTAAAGACGGAAAGGAATCCGGAGCACATGAATCTCTAGAAACACGTGGCACTTCAGATGTAGATGTAACAGTTTCTTCTTTAAATTCAGAAGTGTCAGATGAACTTGAGAAGGAAGCTTCCCTCAAACATAATAGAGAGGACACTTCACTCAAACTGGTAGAAAATATATCTCCAACAGATATATCTTATGAAAAACGTTGTACAGAAATAAAGGAAACAGAGAATACAACAGAAgttcaagtaataaataaaacagaaaaaGCATCTAAAGAAGACATATTAACTAAGCAGACTATGGAAATTGCAACATCTACTGAGCCAATTACTACAGTCATTAGTATCATACAATCAGTTGCTTCTTCTAAGGAAAATGATTGTAGTAATAGCACTTCTGAACAACTAACTTCAGAAGCAATAAGTTCTAAATCTAAGGAAGAGATATTAAATAAAGAGAATATGGAAATatctactgagccgatttctaTAGTGAATACTGCCGCAGAAACAATTATGCCTTCTactaaaaacaattctaataaTAGTATTTCTGAAACACTGAGACTAGATGAAACAAAACCTCTAAATAAAGTGATTTTAACAGATAAAGTTCCTGAAGATATACCATCAGAATCTGAAATTTTGCCTTTAGCTTCTGAAACTATATCATCAACGTCTGATTCTTTGCCGGTTTCTAAAGACTTACTTGTACCTACTGAACATTCGCCATCAATAAATAACTCTGTACCATTTGAAGATATACCAACTCTCGAACCAGTACTGGCAATATCGGGAGTTATACCTTCAACTTTAGAGTCAGTATCGACGACATGCGCACTGACAACATCACCTTCCGAAGCTATATTACCAGTTACAGAAGCTATACCATTAACATCCGAAGTTTTACCATCAACTTCAGAAGCTATCCCTCTAAATTCAGAAAGTATTCCTTCCATTTCGAAACCTATACTGTCAAGCTTAGAAGTCAAGCCATTAAGTCAGGAAGCTCTGCCTTTGACTTTGAAATCTATATCACCAACTTTGGAATCTATGCCACCAACTTCTGAAGCTATATGTACAACTTCAGAAGTTGCATCATTAATGTCAGAAGTTGTACCATCAACTTTGAAACCTATATCATCAATTTTGAAAACTATGTCATTAACTTTGGAAGCTATACCATCAACTAAAGAAGTTATACCATTAACTTCAGAGTCTATATCACCAACTTCGAAATCTAAACCATCAACTTTGGAGTCTGTACAACCGATTTCACAGTCTATACCACCAACTTCTGAAATTATACCGGATATAATTTTGGAAACTAATACATCATTAACTTCAGAAGCTATACCGTCAACTTTGAAAACTATGCCATTAATTGTGGAAGCTATACCATTAACTTCGGAATCTATACCACCAATTCCAAAAGCTGTATTAGCAACTTCAGAAGCTGAAGTTGATGGTACAACTTCTGAAGTTAAACCGTCAACTGCAGAACCTGTACCATCAACTTCCGCAACCATCAGTTCAGAAGTTCAGCCATCGTCTCCAAAAATAGACATAGATATGTCAGAACAAAACCTAGAAATCGAAGATAGTCTAGGTCTATTAGCTGAATCTTCGCGAGTGATGGATTACGATGAAGAAATTGATGATGATGAgtgtgatgatgatgatgacatggATCTTGATGATGAGAGTAGCAATCACATGACAGCTGAGCATTCGGAAGATTCTAATGCACCTAATTCCGAAAATGAGGTACAGAAAGAAAGCTTAACAGTTACGATAAGTGCAAAAGAGAAAGAAGATACTCAGACGGTTGAAAGTAGGAACCTTTCAACAGCAAAGCATTCTAAAAAATCTACGATAAATTCAGATGATGATGGGCAGAAAGAAGAGGACAAACTTGTTACTGAAGGTGAAATAGAGAAAGAAAATATTCAAGTTGAAAATGTTGGATGTGATGATATTGATATCACCGAGGATACGATTGGGAATGCTGATGAGCAAGTTGAGGAACTGATCACTACAGAAAATCTACCGAAACCAGATGAAATAgACAAAAAGCAACAGGACAAACAGAGTGACACCTCCAAAGCAGAAGTACCAACTATAAGGGAGAAAGTAGATATTGTTGTAGAAGTAGAATCGccagaaacaaacaaacaatcaccTAGTAAGATGCAGAATTTTACTATAACAAATACAACTCATTATGTCAATATTATTGACCTGGAGGAAAGTTCTTCTGAGGATGATGTCACTGTACAAGAAACTTGCAAAAAAACAATTGCAGATGTCCAAGATTCAACGCCTATTAATATAGACATAACGACATTGCAGAATGTTCCTCCGATTAAGACTATAGTAACTGCAGTAAAAGAATCTGACGTAACGACAGCAGAAAAAGTCGTTGATgcTCCACTAAAACCAACAGATGAGGTTAGTCCGGTAATGGATAAAGCGGCCGATACAACATTAGATCCATCGAAAAGTGCGATAGTCGAAGAAACAGTAGGCACTTCCAAACCTAAAGTGGGGctagaaatatttaatttggatTCTGACGATGAGGAAATGAAGGAAGCACCGAAACCCGAAGAACCCGACGAACAACAGTTGAAGCAGAAAGAAGAAGAACTAGTAAAAGGGCGTCGTCGGTCGAACAAATGCATAAATCTAGCATGCAAAAGCGTAGACAATGTTTACTATAAAGCAGACAGCTCTATAGTGGCCCACTATGATGCTGCAAGAAAAAAACGGCCTCTGGTGTGTGAGACGTGCGTCCAAGAGTTCTCCCAAAGCCGACTGAGTCTAATAGAGGGTGTGAAGAACATGACTCCACTTTTAGAGTTACTTAGCGGAAGACTTCCCGAGGACTGTGTAGAGATTTCCGACTCGGATTCCGAAGAGGAGGGCGATCTTCCGATTGAGGTGGAGAAGGAACTGGTTGGAGAGGCCGGGGCTAAGCTCTTAGAAGAAAGTTTAGCGGAACTAATAAACGATTCGTGGAAGAAATACAAAATGGATGCCAGATTGAATGATACCACTGAATTGTTGAATAAGGAACTTGAAAAACTTGATGCCGAGAGTAAGGACTTGGATCGTTTGTTGAACGAGTGCCAGTTGGCAACGGATACGTTGCGCAAAGAGTTGTACGCAACGTTCGAGCCGATCCGCGAGGAGTTGCCGCCTATAGTCATTATGGATACACCCGATAAGAACTTTACATGCAACGAAAGCTATTATCTGATGGATCAAATGGCTGATGCTGAGAAAGCACAACAGAATGCTAAACGTCGTACAAAGAAGACCGTTATACCTCTAGGTTATGCTTCGTTGAACAATGATCCGCACAATAAGCAGGAGTCGAAGCCACTTACCCAAGCTACAGAAACGTCCTCGAAAGTCGAGGAAGATaaAGACGTGTCAGTGGTGCAGTTGTCAGCGGAGGTGGCGCCCCCTGACCTGCCGGCGTGCGGCGACGTGAACAGGCCCAATTTGAAAGTTGGCTTGACTGTGTACGCTGTCAGGAACGCCTTCGCGCCGTGGCTCAAGGCGAGGATATTGGAACTGACGCCCAAGGGGACTAAGGGATCGCAATATACCATGTGTCGAGTGAAATTCGAGACAACTGTCAAGAATCCATTCAAAGTGCTATCTGCTAGAGATATTGCTTACGAGCATCCCACTGATGTCAGACTGACCATCGGTACGAGGATCATAGCACTCTTCAAGGATGCGGCGAACGATGGCAAAAGGGAGTCATATTACTCTGGAATCGTGGCCGAAGTACCCACACCGGTCAATAGTTTCAGGTATTTGGTGTTCTTCGACGATGGCTACGCTCAATACGTCCTTCACAAGGACACGCGTCTGGTATGCGAAAGTTCACCCGTGGTTTGGGACGAGGTTCATCCCTATTCGCGTGAATTCGTGAAGAAATACCTCCTGGCCTATCCAGAGAGGCCGATGGTGAGGTTGCACGCTGGGCAGAGTTTGAAGACCGAGTGGAATGGTAAATGGTGGACATCGAAGGTTATAAAAGTGGATGCGTCTCTAGTCCAAGTCCATTTTGAAGAAGATAACCGTACCGAATGGATATACCGAGGGTCGACCAGACTCGCTCCATTGTATCTCGAATTGCAAGCGGCACAGCGTCACCGAAACAGGCCCTTGCCGAGAAGCAAAGCTCAGACCAGGaGCAACATGCCTTACGTGGAATACACGAGGCCGGATGAGCCGAATTCCAATAAAGAGACAGAACTTCAAGCACAGCAACGTCAAGAGGAGATTCGGCGGCAACGTGCGGTGGCAAAGAAATCAACTATGGCCTCCTCTACGCCAACAAACCAGCCGCCGAACATCGTCGAGTCGCCGCTCACTACTAGAGTCGTGtattatacACCGAAGAATGCTGTGAAACCTTATAAAATGACCCCACACAACTGTAGCCCTAGGTGTAAGCGAACGGACGTGTTGGGGCTTAAGGAGTTGCGCACATACAACCCATTAGCTAAACCCCTTCTAAGCGGCTGGGAGAGACAAATAATCCGTTACAAAGGACATAAGGATGTCATGTACCGCGCGCCGTGCGGCCGCCGTCTGCGCAATATGCGCGAGTTGCACACATACCTGCGCACGATTGGCAGCGAAATGGCCGTCGACCTGTTCGATTTTCATCCCAACACGCACTGCTTGGCCGAGTTTGTTGTCACCAAATGTTTGGTTGGGAAGAAGgaCTTGTCCCATGGTAGGGAGAACGTCCCGATCCCATGTGTCAATACCCTGGATAAGACTCTTCCAGAGTTCTGTTCGTACAACACGGAAAGGACCCCCACGGCTGGGGTTCCCCTGAATTTGGACCCCGAGTTTCTATGCGGCTGTGATTGTACTGACGATTGTGAGGATAAATCGAAATGCGCTTGCTGGCAAATGACGCTAGAGGGCGCTAAGACTATCGGGCTCGAAGGATCAAATGTCGGTTATGTCTATAAAAGACTACCAGAGCCACTGCCCTCCGGTATTTATGAGTGTAATTCAAGGTGTAAATGCCGGCAGACGTGTCTCAATCGAGTGGCGCAGCATCCTCTACAGCTGAAATTGCAGGTGTTTAAGACATTGAGTCGCGGTTGGGGAATCCGCGCGTTAAACGACGTGCCCACCGGCGCATTTCTCTGCGTATATGCTGGAAATCTTCTCACAGATGCCACCGCTAATTTGGACGGTTTGAACGAAGGCGACGAATATCTGGCAGAACTGGACTACATCGAGGTGGTGGAACAAATGAAGGAGGGCTACGAGGACGACATTCCCGAAGCCGACAAGAAGTTGGATAAGAAAGACTCGAGCGAACAGTCTTGCGAAGAAGATTCCGCGACTTCGGAAGAAGAGAACGGCTCGATGGACGACAAGCAAGATGACGACTTCCAGCCCGGGTTCAGTGGTAATTGGGCCCTTGGAAATGacgaaaataaaaaaacaCTAAGAAAAAGAGAGAGGAAATTGAAGAAGGAGAAAGAGGAGAAGAATAAGTGTGCCAAAGAAGCGAACCAGAACGATGACTGTATCACCATAAGCGACGACGACGAAGTGAGAGAACCGGCAAGTTTCACAGCGCAACTCGGTATGGGCGCGAAAGAATTCGTCTCTAAATATAACTCCGTCCGTGCACATTTCGGCAGAGACGAGGCGTGCTACATCATGGACGCTAAGGTTCAAGGCAACATTGGACGATATTTAAACCACTCGTGTTCGCCGAACGTGTTCGTGCAGAACGTGTTCGTGGACACGCACGACCCGCGCTTCCCGTGGGTGGCGTTCTTCGCGCTGTGCCACGTGCGCGCCGGCACCGAGCTCACGTGGAACTACAACTACGACGTGGGCTCGGTTCCCGACAAGGTGCTCTACTGCCACTGCGGCGCGCCCAACTGCCGGGGCCGGCTCCTCTGA
- Protein Sequence
- MSSELKLEDTSIKCVNDTNKSNVQADEDGESDGYTKENSEDIEEQSTIIKSFNEENSHLSDKNPSEIDVQQSNVKQDVDSLDKNKYAINRQNKVIESTKCMDEGIDSQEEFLLRWDDDNENEDVKYDEIGIDEDALLSVKDDTENEEFPHESSEKNDNIMLVDNATQKLLTESFRATDEHVVELGSTKVEVPNMVPDIDKKSQITDNNCQENIRKLIPAAKTVGDIDNLQAGDLSLLQVQNKSMNIEEKVNVTNISEFKKELETDSCDVLYQNITNEIACGSVPQEQVKPVSTVSKIESNIDNEVISSVVDSSKTSENTIMSDYVESMILDEVTENTSKVHNCSTNQIVDEEFNISESINNDQTQVQSEYNIYMTGIVTEGDSKTVDTNTTSDNTVKSTNNINLKATFSCSDTNEPKTIEVIDIKNVTETKSENATENNTEKIFLVDPQKNTISTKEEVKSLDIHDLNLCITPEIKTDHAINKPDIMLEIPTQELIDIDNNDSTLEQDISLDMESQLLNKVDDNFLHNDSPVSSISNEDMSIDKIILSLDDDNDNVEESHKDNFSISSNLEGGNVQKESKLNENPVEISNKNVEIQDVLTENIKSNNINDNITSTKTNRNKNSTEIVMESFKMLSDTPMYDVSKQSEVENKPSKYYYYYDDTDAQPVEVNSSKDGKESGAHESLETRGTSDVDVTVSSLNSEVSDELEKEASLKHNREDTSLKLVENISPTDISYEKRCTEIKETENTTEVQVINKTEKASKEDILTKQTMEIATSTEPITTVISIIQSVASSKENDCSNSTSEQLTSEAISSKSKEEILNKENMEISTEPISIVNTAAETIMPSTKNNSNNSISETLRLDETKPLNKVILTDKVPEDIPSESEILPLASETISSTSDSLPVSKDLLVPTEHSPSINNSVPFEDIPTLEPVLAISGVIPSTLESVSTTCALTTSPSEAILPVTEAIPLTSEVLPSTSEAIPLNSESIPSISKPILSSLEVKPLSQEALPLTLKSISPTLESMPPTSEAICTTSEVASLMSEVVPSTLKPISSILKTMSLTLEAIPSTKEVIPLTSESISPTSKSKPSTLESVQPISQSIPPTSEIIPDIILETNTSLTSEAIPSTLKTMPLIVEAIPLTSESIPPIPKAVLATSEAEVDGTTSEVKPSTAEPVPSTSATISSEVQPSSPKIDIDMSEQNLEIEDSLGLLAESSRVMDYDEEIDDDECDDDDDMDLDDESSNHMTAEHSEDSNAPNSENEVQKESLTVTISAKEKEDTQTVESRNLSTAKHSKKSTINSDDDGQKEEDKLVTEGEIEKENIQVENVGCDDIDITEDTIGNADEQVEELITTENLPKPDEIDKKQQDKQSDTSKAEVPTIREKVDIVVEVESPETNKQSPSKMQNFTITNTTHYVNIIDLEESSSEDDVTVQETCKKTIADVQDSTPINIDITTLQNVPPIKTIVTAVKESDVTTAEKVVDAPLKPTDEVSPVMDKAADTTLDPSKSAIVEETVGTSKPKVGLEIFNLDSDDEEMKEAPKPEEPDEQQLKQKEEELVKGRRRSNKCINLACKSVDNVYYKADSSIVAHYDAARKKRPLVCETCVQEFSQSRLSLIEGVKNMTPLLELLSGRLPEDCVEISDSDSEEEGDLPIEVEKELVGEAGAKLLEESLAELINDSWKKYKMDARLNDTTELLNKELEKLDAESKDLDRLLNECQLATDTLRKELYATFEPIREELPPIVIMDTPDKNFTCNESYYLMDQMADAEKAQQNAKRRTKKTVIPLGYASLNNDPHNKQESKPLTQATETSSKVEEDKDVSVVQLSAEVAPPDLPACGDVNRPNLKVGLTVYAVRNAFAPWLKARILELTPKGTKGSQYTMCRVKFETTVKNPFKVLSARDIAYEHPTDVRLTIGTRIIALFKDAANDGKRESYYSGIVAEVPTPVNSFRYLVFFDDGYAQYVLHKDTRLVCESSPVVWDEVHPYSREFVKKYLLAYPERPMVRLHAGQSLKTEWNGKWWTSKVIKVDASLVQVHFEEDNRTEWIYRGSTRLAPLYLELQAAQRHRNRPLPRSKAQTRSNMPYVEYTRPDEPNSNKETELQAQQRQEEIRRQRAVAKKSTMASSTPTNQPPNIVESPLTTRVVYYTPKNAVKPYKMTPHNCSPRCKRTDVLGLKELRTYNPLAKPLLSGWERQIIRYKGHKDVMYRAPCGRRLRNMRELHTYLRTIGSEMAVDLFDFHPNTHCLAEFVVTKCLVGKKDLSHGRENVPIPCVNTLDKTLPEFCSYNTERTPTAGVPLNLDPEFLCGCDCTDDCEDKSKCACWQMTLEGAKTIGLEGSNVGYVYKRLPEPLPSGIYECNSRCKCRQTCLNRVAQHPLQLKLQVFKTLSRGWGIRALNDVPTGAFLCVYAGNLLTDATANLDGLNEGDEYLAELDYIEVVEQMKEGYEDDIPEADKKLDKKDSSEQSCEEDSATSEEENGSMDDKQDDDFQPGFSGNWALGNDENKKTLRKRERKLKKEKEEKNKCAKEANQNDDCITISDDDEVREPASFTAQLGMGAKEFVSKYNSVRAHFGRDEACYIMDAKVQGNIGRYLNHSCSPNVFVQNVFVDTHDPRFPWVAFFALCHVRAGTELTWNYNYDVGSVPDKVLYCHCGAPNCRGRLL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -