Basic Information

Insect: Dendroctonus ponderosae
Gene Symbol: Rel_1
Assembly: GCA_000355655.1
Location: NW:93445-115127[-]

Transcription Factor Domain

TF Family: RHD
Domain: RHD domain
PFAM: PF00554
TF Group: Beta-Scaffold Factors
Description: Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 2.4e-09 1.3e-05 24.5 0.0 1 33 102 134 102 140 0.92

2 3 4.2e-08 0.00022 20.5 0.0 115 168 159 211 135 212 0.79

3 3 0.29 1.5e+03 -1.8 0.1 97 116 428 450 411 493 0.61

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	2.4e-09	1.3e-05	24.5	0.0	1	33	102	134	102	140	0.92
2	3	4.2e-08	0.00022	20.5	0.0	115	168	159	211	135	212	0.79
3	3	0.29	1.5e+03	-1.8	0.1	97	116	428	450	411	493	0.61

Sequence Information

Coding Sequence: ATGTTGTTCGAACAGCATTCTCCCGATTCCAGTTCGCACATTgacatattaaataattgcgaaaaTGATTCCTGGAAATTCAAGAAATCCAGTAATGAAGTTCTTAATATGGCCACTTACCCGACGCCACCTTCGAGTAGTGGAGATTCGCCGCAAcccatatttttaatttcttcgcCCAATTCTCAACATTATTCAGTTGTGTCTCCAGAAGGCAGCCAACATTACATTCAAGCACAAATAGTATCCACTAATTCCTCATTGATGGATATGGACGACTCACCCACATCAAATGtaccatatttaaaatttctggaaCAACCCACcaataaatttcgatttcgGTACAAATCGGAAATGGCCGGAACTCACGGAAGTCTGTGTGGCATGAACTCGGATAGaatacaagtGGATATCTCTTGTGCTAGGAAACAATGTTCCATCCGTGAGATATCTGGGTGTGTTTACAGTTTGCATTTACGTTTGCCCGCATTTCAGATTAAGGGATTGGCACAAGAAGAGAGCAAATccattaatttgaatattgttcGTCTCAGATTTGATgcatttgttataaaaaatggtATTCGCCACCCTATTTGTCCACCCATATACAGTCACGGCATAAACAACCTAAaatgcGCTCTCACTGGGGACTTAAGAATAGTCCGGATGGATCATTGCACGAGCCCTGCAAAGGGTGGCCAGGAGATCTTTCTTTTGGTTGAACGAGTTACTAAAATATTCcagtgtttattttcaatctTACCCAATTCTGAGTGGCTTACCCCACTTCATATTGCGGCTCACTGTCGAAATGATgaatttgttgaatatttgttACAATGTAAAGCAAATCCATTGATTCAAGACAATAATGGAAGGACGGCGTTGCATATGGCGATCAAATCAGTAGCTTCATTGTCAATGCTAGAAATGCTattgaagaagaaatttttaaaccagtTAATTGATTTAGAGGATTACGAAGGAAGAACTCCACTGAATCTTGCTATTGAAACTCGCAATTTAATGgctataaaaacattttgtctgTTCGGTGCCgatgttaataaaaaacaccATAAAAACGGATTCACACCTCTTAGACATGCTATTGAAATGCAGTATGTTGAAGCTATTCAACTTCTCCTGCTGCACCCCATGTTAGATATTGGGGCGCAAACTGACTTCCAGGGTCTCTCCCCATTTCAGTTCGCCATCATGAATTCATCAAGCAAGGAAGTGATGGAgatcattaataaatttgccATTTCGAAGGGCATCCAAATAGAGgttaaaaaggaaattgagGATGAAGAATccattttaccaaaaaaagtGCAGACgctatttcagaaattttatgGAATTACGTGTCCATACCATACTCACTATAAAATTACGCAATTAATGGAAATCAATTTGCAGGAAATAGAATTGAAGCATGAAGTAATTGAACCTATAGATAACCCGGAGTTGCTTTACACAAACATAACAAATTTCACTCCCAAATGTCTTGACGAGGTTTCTGCCATTCTGGATGATAGTGGAAAGTATGCTCATTTGGCAGATTTGCTAGACTTGACACATTTACTTGACGCGGGAGTTATATCCAGTGAGCGAAGTATCAGTAAACATTTACTTCAATATGCTATAGAGAAAGATAATGTGAAGATTCTGGAAATCCGAAATTTCCTGGAGAACCTCGATGAGTATAAAGCAGTTACCATTATTGATCAAATGGCCCATGAATTTCAGTTAAGGTAA
Protein Sequence: MLFEQHSPDSSSHIDILNNCENDSWKFKKSSNEVLNMATYPTPPSSSGDSPQPIFLISSPNSQHYSVVSPEGSQHYIQAQIVSTNSSLMDMDDSPTSNVPYLKFLEQPTNKFRFRYKSEMAGTHGSLCGMNSDRIQVDISCARKQCSIREISGCVYSLHLRLPAFQIKGLAQEESKSINLNIVRLRFDAFVIKNGIRHPICPPIYSHGINNLKCALTGDLRIVRMDHCTSPAKGGQEIFLLVERVTKIFQCLFSILPNSEWLTPLHIAAHCRNDEFVEYLLQCKANPLIQDNNGRTALHMAIKSVASLSMLEMLLKKKFLNQLIDLEDYEGRTPLNLAIETRNLMAIKTFCLFGADVNKKHHKNGFTPLRHAIEMQYVEAIQLLLLHPMLDIGAQTDFQGLSPFQFAIMNSSSKEVMEIINKFAISKGIQIEVKKEIEDEESILPKKVQTLFQKFYGITCPYHTHYKITQLMEINLQEIELKHEVIEPIDNPELLYTNITNFTPKCLDEVSAILDDSGKYAHLADLLDLTHLLDAGVISSERSISKHLLQYAIEKDNVKILEIRNFLENLDEYKAVTIIDQMAHEFQLR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -