Basic Information

Gene Symbol
ssr2
Assembly
GCA_010014985.1
Location
JAAAKR010005184.1:3834-6052[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.7e-10 4.6e-07 31.3 0.0 3 44 402 443 400 445 0.94

Sequence Information

Coding Sequence
ATGGAGGATAACCCGAATGCTTCGAGCGCTGCCGATGATGCTCAGGCCATCGCTGCCGGTCAGGATGCCCCGGGTGATGTCGTTGGTGTGCCCAGTCACGCTTTTGAATCGCAATCGCGTCAGGGATCGCCGGTGAAGAAGACGGAAAGTGCTTCGGGAGCCGATAACCCGCTCGACGCGCCTGCGTCTCCCAAGCCGCAGAACGGCGATGCCGATCCCGAGGACGAGGAGATGGGTGGCATGGAAGATGCAAAGAAGGAACCAGAGATTGGCGATGAGGCTGGGGAGGGTATTTTGGGTGCGGATGGTACTGTCGAAGAGCAGCCCGCGCAGGCTAAAGCGTCGCTCGAGGCCTCTGCTCGTTCACATCTGGTCTCGCAGACACATGCCATTATCCTTCCCAGCTATTCCACCTGGTTTGATATGCACGTCATCCATCCTATAGAGAAGAAAGCTTTGGCCGAGTTCTTCAATGGCCGAAACCGCAGCAAGACCCCCGCCGTCTACAAGGACTACCGAGATTTCATGATCAACACCTATCGACTCAACCCCATCGAGTATCTTACGGTTACGGCCTGCCGTCGCAACCTTGCGGGAGATGTCTGCGCTATCATGCGCGTCCATTCTTTCCTCGAGCAGTGGGGGTTGATTAACTACCAGGTTGATCCCCAAACACGTCCTTCTAACATCGGTCCTCCCTTTACTGGCCATTTCCGGGTAGTTGCCGACACCCCGCGTGGTCTTCAGCCTTTCCAACCCGGCCCCAGCCATACAGTCACCCCAGGAAAgcctcacccggccactgacCGTGCCGCTTCAGCTACTCCTGCCTCCAAGGCAGATCTCAACCTCGAACTTCGCCGTAATATCTACGACGACAAGGGCAAAGACATCACGCCTGCTACGGAGGACAAAGAAAAACAGACCAACGGCGAAGGCTCTGCTGATGATTCGACCAAGGCGCTCGAGAACGCTGCTCGGGAACCTAGAAAGAAGGCCAACTGCTTCTCCTGCGGCATCGACTGCACCCGTCTCAGATTCCATTACGCGAAGTCGACTCCAGCATCAGCCAACGCCTCGAATTCGAAGTACGATCTGTGTCCAAACTGCTTTTTGCAGGGGCGAATGCCTTCCAGCCACAGCGCATCAGACTTTGTCAAGCTTGAAGATAATGAGTACACAATTGCCGCTGATAAAGATACGCCTTGGGGCGACTCGGAACTTGTCCTACTCCTTGAAGGGTTGGAGAATTTCGATGACAACTGGGAACAAATTGCCAACCACGTGGGTACGAGGACAAAGGAAGAATGTGTGATGAAGTTCCTGCAGCTTGAGATCGAAGACAAATATGTTGATGATGTGCCAAACGTCCGTGGCTCCAACGGAAGAGAGCCCATCAGTCACGTCGAAAACCCGGTTCTGTCCGTGGTTGCATTCCTCGCCCAAATGGCAGAgcctgctgttgctgctgctgcggcCGGACGCTCTGTAGAAGAGATCCGCAAGGAGCTGAAGAAGCAGCTCGGGAAAGGCTCGAGTGAAGACAAGGGCAAAGAGAAGGAGGGCGAGCCCACGAAGACAGAGGATTCCATGGAACTGGACACTGCTCGTGAGCAGGCTTCTGCAGAGGGCGCAGAGACGCAGCCCAAAGCATCGCTTCCAAACGTTGCACTTGCCGCCTCCGCGGCTCGTGCTGGAGCTCTGGCCTCGCACGAAGAACGCGAGATGACCCGCCTCGTCTCATCCGCTGTCAACGTCACCCTCCAGAAATTCGAAGTCAAGCTGCAGCAGTTCAACGAAATGGAAGAGATCATCGAAGCTGAACGTCGGGAACTCGAACAAGCTCGCCAGCAGCTTTTCCTGGACCGAATGGCCATGAAGAAGAGAGTCAAGGAGGTCCAGGATTCTCTCCAGTCCATTACCCTCAAGGGACCCAGTGAAGACACGAACACCTTGATCGGGGACGCCGCAGCGGCTGGTGTCGGTAACCGCTACAACTTCCAGCCTGTTGGTGGTGATTTCAGAGCAGGTGCTCAACCCTGGAGTGCTGAGGCAAACGCCGACTTCAGGACGTTTGATCTATAA
Protein Sequence
MEDNPNASSAADDAQAIAAGQDAPGDVVGVPSHAFESQSRQGSPVKKTESASGADNPLDAPASPKPQNGDADPEDEEMGGMEDAKKEPEIGDEAGEGILGADGTVEEQPAQAKASLEASARSHLVSQTHAIILPSYSTWFDMHVIHPIEKKALAEFFNGRNRSKTPAVYKDYRDFMINTYRLNPIEYLTVTACRRNLAGDVCAIMRVHSFLEQWGLINYQVDPQTRPSNIGPPFTGHFRVVADTPRGLQPFQPGPSHTVTPGKPHPATDRAASATPASKADLNLELRRNIYDDKGKDITPATEDKEKQTNGEGSADDSTKALENAAREPRKKANCFSCGIDCTRLRFHYAKSTPASANASNSKYDLCPNCFLQGRMPSSHSASDFVKLEDNEYTIAADKDTPWGDSELVLLLEGLENFDDNWEQIANHVGTRTKEECVMKFLQLEIEDKYVDDVPNVRGSNGREPISHVENPVLSVVAFLAQMAEPAVAAAAAGRSVEEIRKELKKQLGKGSSEDKGKEKEGEPTKTEDSMELDTAREQASAEGAETQPKASLPNVALAASAARAGALASHEEREMTRLVSSAVNVTLQKFEVKLQQFNEMEEIIEAERRELEQARQQLFLDRMAMKKRVKEVQDSLQSITLKGPSEDTNTLIGDAAAAGVGNRYNFQPVGGDFRAGAQPWSAEANADFRTFDL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00430600;
90% Identity
iTF_00180421;
80% Identity
-