Basic Information

Gene Symbol
ssr2
Assembly
GCA_018248015.1
Location
DWHX01007152.1:8825-11036[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.2e-10 5e-07 31.3 0.0 3 44 402 443 400 445 0.94
2 2 10 1.6e+04 -2.3 0.0 26 40 488 502 487 507 0.81

Sequence Information

Coding Sequence
ATGGAGGATAACCCGAATGCTTCGAGCGGCGCTGCCGGTGATGCTCAGGCTATCGCTGCCGGTCAGGATGCCCCGGGTGATGTTGTTGGTGTTCCGAGTCACGCTTCTGAATCGCAATCGCGTCAGGGATCGCCGGTGAAGAAGACGGAGAGTGCTTCGGGTACCGATAACCCGCTCGACGCGCCTGCGTCTCCCAAGCCGCAGAATGGCGATGCCGATCCTGAGGACGAGGAGATGGGCGGCATGGAAGATGCAAAGAAAGAACCAGAGGGTGATGAGGCTGGGGAGGGTATACTGGGTGCGGATGGTACCGTCGAGGAGCAGCCTGCGCAGGCCAAAGCATCACTTGAGGCCTCTGCTCGTTCACATCTGGTCTCCCAGACACATGCCATTATTCTCCCCAGCTATTCCACCTGGTTTGATATGCACGTCATCCACCCTATAGAGAAGAAGGCTTTGGCCGAATTCTTCAATGGTCGCAACCGCAGCAAGACCCCCGCCGTCTACAAGGACTACCGAGATTTCATGATCAACACCTATCGACTCAACCCCATCGAGTACCTTACGGTTACCGCCTGCCGTCGCAACCTTGCCGGAGATGTCTGCGCCATCATGCGCGTTCACTCTTTCCTCGAGCAGTGGGGGTTGATTAACTACCAGGTTGACCCTCAAACACGTCCTTCTAACATCGGTCCTCCGTTCACGGGTCATTTCCGGGTAATTGCCGACACCCCGCGTGGTCTCCAGCCTTTCCAACCCGGTCCCAGCCATACGGTTACACCAGGAAAGCCTCACCCGGCCACTGACCGTGCCGCTTCAGCTACTCCTGCCTCCAAGGCGGATCTCAACCTCGAACTTCGCCGTAATATTTACGACGACAAAGGCAAGGAAATCACGCCCGCCACAGAGGACAAAGAAAAGCAGACCAACGGCGAAGGTTCCGCCGATGATTCGACCAAGGTGCTCGAGAACGCCGCTCGGGAACCCAGAAAGAAGGCCCATTGCTTCTCTTGTGGCATTGACTGCACTCGTCTCAGATTCCACTACGCGAAGTCAACCCCAGCATCAGGTAATGCCTCGAATTCGAAGTACGATCTGTGCCCCAACTGCTTTTTGCAAGGGCGAATGCCTTCGAGCCACAGCGCATCGGACTTTGTTAAACTTGAAGACAACGAATACACAATTGCCGCTGATAAAGATACGCCTTGGGGTGACTCGGAACTCGTCCTGCTCCTTGAAGGGTTGGAGAACTTTGATGACAACTGGGAACAAATTGCCAACCACGTGGGTACGAGGACAAAGGAAGAATGTGTGATGAAGTTCCTGCAGCTTGAGATCGAAGACAAATATGTCGACGATGTGCCAAACCTGCAGGGATCGAGCGGAAGAGATCCCGTTAGCCATGTCGAAAACCCGGTTCTGTCCGTGGTTGCATTCCTCGCCCAAATGGCAGAGCCTGCTGTTGCTGCGGCTGCGGCCGGACGCTCTGTGGAAGAGATCCGCAAGGAACTCAAGAAGCAGCTCGGGAAAGGCTCGAGTGAGGACAAGGGCAAGGAGAAAGAAGGCGAGCCCACGAAGGCAGAGAATTCCATGGAACTGGACACTGCTCGTGAGCAGGCTTCTGCTGAAGGTGCAGAGACGCAGCCTAAAGCATCCCTTCCGAATGTTGCACTTGCAGCCTCTGCGGCTCGTGCTGGAGCCCTGGCCTCGCATGAAGAACGGGAGATGACCCGTCTCGTCTCGTCCGCTGTCAACGTCACTCTCCAGAAGTTCGAAATCAAGCTGCAGCAATTCAACGAGATGGAGGAGATCATTGAGGCTGAGCGTCGGGAGCTCGAACAAGCTCGCCAGCAGCTTTTCCTGGACCGAATGGCCATGAAGAAGAGAGTCAAGGAGGTCCAGGATTCTCTCCAGTCCATTACCCTCAAGGGACCCAGCGAAGACACGAACACGTTGATCCAGGATGCCGCGGCGGCTGGTGTCGGTAATCGCTACAACTTCCAGCCCGTTGGTGGTGATTTCAGAGCAGGTGCCCAACCCTGGAGCGCTGAGGCAAACGCCGACTTCAGGACGTTTGATCTTTAA
Protein Sequence
MEDNPNASSGAAGDAQAIAAGQDAPGDVVGVPSHASESQSRQGSPVKKTESASGTDNPLDAPASPKPQNGDADPEDEEMGGMEDAKKEPEGDEAGEGILGADGTVEEQPAQAKASLEASARSHLVSQTHAIILPSYSTWFDMHVIHPIEKKALAEFFNGRNRSKTPAVYKDYRDFMINTYRLNPIEYLTVTACRRNLAGDVCAIMRVHSFLEQWGLINYQVDPQTRPSNIGPPFTGHFRVIADTPRGLQPFQPGPSHTVTPGKPHPATDRAASATPASKADLNLELRRNIYDDKGKEITPATEDKEKQTNGEGSADDSTKVLENAAREPRKKAHCFSCGIDCTRLRFHYAKSTPASGNASNSKYDLCPNCFLQGRMPSSHSASDFVKLEDNEYTIAADKDTPWGDSELVLLLEGLENFDDNWEQIANHVGTRTKEECVMKFLQLEIEDKYVDDVPNLQGSSGRDPVSHVENPVLSVVAFLAQMAEPAVAAAAAGRSVEEIRKELKKQLGKGSSEDKGKEKEGEPTKAENSMELDTAREQASAEGAETQPKASLPNVALAASAARAGALASHEEREMTRLVSSAVNVTLQKFEIKLQQFNEMEEIIEAERRELEQARQQLFLDRMAMKKRVKEVQDSLQSITLKGPSEDTNTLIQDAAAAGVGNRYNFQPVGGDFRAGAQPWSAEANADFRTFDL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00430600;
90% Identity
iTF_00430601;
80% Identity
-