Dpas032772.1
Basic Information
- Insect
- Delias pasithoe
- Gene Symbol
- -
- Assembly
- GCA_010014985.1
- Location
- JAAAKR010000040.1:153035-157052[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 5.4e-12 4e-08 34.3 0.0 2 38 161 198 160 203 0.89 2 4 2.9e-13 2.2e-09 38.4 0.1 1 39 214 252 214 255 0.94 3 4 3.7e-17 2.8e-13 50.8 0.1 2 45 270 314 269 314 0.96 4 4 6.2e-18 4.6e-14 53.3 0.0 1 40 321 361 321 364 0.93
Sequence Information
- Coding Sequence
- ATGCCCGGATACGGATCGTTCCAAGTGAAGTGCGAACCGCATTCTGACGAGGAAGAGAAAGCTCAATACGAAAATAATTACAGAACACAGAGGTCAGTCGCATTAAACACTGAATCAATATACGATGCAGATGTCTCAGTTAAAATTTTGGATCAGCTAcagTTCTCATCGGAGCCGGTGGCGGTGCCAGCAGCGCCGTCAGCCACTCCGGTTAGCGCCGCTATTCCTGCGCCGCGGGAGACCTCTCTCGCATTGTTGGAGCCTGTCAAGACCCACCTCACTCAAggtAAACAGCTGATGGAGAAACATCTCACGATGTCGAGTTCGACGGATATTCTTGATACGTCTGATTTCGCACCACTTCTCAATATCAAAGATGAACCACTATCTGAAGGAGAGAATGCGCAGCTGAGTGGAGATGAAATGAGTGAGGGAAGCACGCTGGAGAACAGCGGTCGAGTTGCAGCCAAAAGCTGGTCTCCGCAAGACATGGAAAAGGCCTTGGATGCCCTCAAAAACCATCAAATGAGTCTGACAAAAGCATCAGCAACGTATGGTATACCGTCAACGACTCTATGGCAGCGCGCTCATCGCATGGGCATCGATACGCCGAAGAAGGAAGGCACGTCAAAATCTTGGAGTGAGGATGACCTCAAAGGTGCACTACACGCGCTCAGAACTGGAGCCATTTCTGCGAATAAGGCCAGCAAGGCATACGGAATACCCAGCAGTACTCTATACAAGATAGCCCGACGTGAAGGTATACGTTTGGCGGCACCCTTCAACGCTGCACCGACGTCGTGGCGCCGAGCTGACCTCGAGCGGGCTCTCGAAGCCATCCGCTGCGGCGCTGCTTCTGTACAACGCGCCGCTTCCCACTACGGCATACCTACTGGCACTCTGTATGGTCGGTGTAAGCGAGAGGGTATTGAGCTTTCCCGTTCGAACCCTACGCCGTGGTCTGAAGACGCCATGGGCGAAGCACTGGAAGCTGTCAGGGTGGGACAGATGTCGATAAACCAAGCTgctattcattttaatttgccGTACTCCTCACTGTACGGCCGGTTCAAAAGGTGCAAGATTCAAATACCACAGGAGAACCATCAAAACCAAGCTCAGGCAATCCGTTCCGAAGAGTATCAAGAGCAAAGTCATGATGAGTACTACCAGAGCTACGAATCTGAGACGTACTTGAGTGAAGTGACTTCTATGCAAAATGTACAACAACACTACAGCCAAGCGATGTACTACACACAGTGCAATGTGACGAGTTGA
- Protein Sequence
- MPGYGSFQVKCEPHSDEEEKAQYENNYRTQRSVALNTESIYDADVSVKILDQLQFSSEPVAVPAAPSATPVSAAIPAPRETSLALLEPVKTHLTQGKQLMEKHLTMSSSTDILDTSDFAPLLNIKDEPLSEGENAQLSGDEMSEGSTLENSGRVAAKSWSPQDMEKALDALKNHQMSLTKASATYGIPSTTLWQRAHRMGIDTPKKEGTSKSWSEDDLKGALHALRTGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTSWRRADLERALEAIRCGAASVQRAASHYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHFNLPYSSLYGRFKRCKIQIPQENHQNQAQAIRSEEYQEQSHDEYYQSYESETYLSEVTSMQNVQQHYSQAMYYTQCNVTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01206478;
- 90% Identity
- -
- 80% Identity
- -