Basic Information

Gene Symbol
sol1
Assembly
GCA_010014985.1
Location
JAAAKR010000147.1:58792-61740[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.7e-27 2.5e-23 83.8 0.0 2 89 288 374 287 374 0.95

Sequence Information

Coding Sequence
ATGAATGCCTGGCTAGCCGACGCCCCGAACCTCCCCAGCCAGGACAATGGCGCTTTCCATCCCACGACCATTGATCCTTCAGCAGCCTTCCTCCACCCCTCGCCCACTCCTGATCCCAACCAATTCCAACAGCGCATGTTCAATGGCCTGTCGCGAAATGTTTCTCCCGGCTTCCAGAATCCAAACCAAGTGATTCCATCGAAACGGCCGCGCCCCGAAGATGGCGTCGCCATGTCTCCTCGACCAGCACCCGGGGGGCTGGCGGCGTCGCGATCACAGACTCCGCACCAGGTGTCCTTCCCGGGGTATCAGGCACCAGCCAACGGTACGCCGCAGTTTCCTGCTCATCCTACACCGTATCAGCACCTCCAACGAGGGGCTTCTCCCAGCGTCACTCAATCTCCAGTCATGCAAGATTTCGACCAGCACAGTGTCCAGCGCATGGGGACCGCCTCGCCAAGCCCATTCTCTCCCGCCGGTCCCCACGTGGGCTCGCAGATGTCACCGTCGCAATCGGATCATCCCAGCCGGGTGAACACGCCGCAAAGTGGCGCGTTTATGCCGCCTAGCCACCCCTTTCCCCAGTCCATGGGACCACAGTTTACTCCTGCACCTCCGGCCATGACTTCGGCTGGAGTCCAGGCGCCTATGCAAGCGCCATTTGGCACTGTACCACAGGGATACCAGCAAGCCATGGCCATTCAGCAGCAACGGCTGCAAGCTATGCAGATGCAGAACCCAGGGCGACCAATGGGAATGAACCCGGCCATGATGGGCAGGCCCATGGCGCCTGGAATGAATCCCATGGCTCATCCCCAGCAGGTGGCAGCCATGCGGCAGATGCAGCAGAAACCATCCAGTCCGGAAGGGTTTATGAGATCGCTGCAAAAGTTCATGATTTCCCGGAATCTGCCGTTAGATCCCCATCCTCTTGTCTGCGGTCGTCCAATCAACCTGGTCCAGCTGTATGCGGCAGTTATGAAATTGGGAGGCTCGAAGAAGGTTTCGGCAGCTAACATGTGGCCTGTGATTGCCCAGCAGCTGCACTTTCCTCCAGTGCAGTTCCCAATGGCAATACAGGAACTTCGGGAGCATTACACCAGAAATCTCGCAGCGTACGAACAGGCCTTCCTTAGCACTCAACAGAAGCAATCGGCAGACCAACAGCAACCGAATTCGTTGCCCCGGACAGTGAGCGATCCAACCGGGGCACAGTTCCAATCCCCGACGAATAGGCAGGGCCAGGGCTTCGACGCTCCGCAAACTCTTGCTCTCCCCTCGGCCGGTAATGCAGCTTCAGCATCAAATAGTATGTCACATAGCGCGCCGAACGGGTTCGCGACTCCTTCCCAAGTCAAGGGCTCGAACAAACCACCGCAACATCAGCACCGTCTTAGCATGTCCCGCCCCTCTCAGCCACCGGATACTCCTCAAGATCCCTCTGAACAGTTATCAGGACCTTCAGCTACGCAGCCCGGGGGACCTGGGTCGCAGCCTGGAAAGCCATCTGATCAGTCGTCCGATCAACCATTACAGCATCCTATTGAAGATCCCTTCAAGCCTACGGTTTTGCCTGAGAGCAATCTTCATGGTCCTATTCAGGTGGATGAGTTTGCTCAGCTTGGAGAGGACATTTCTAGGTTAAAGCCCAACGTGCCGGCATTTGCGGAGCTGGGCGTAATTGACATACACGCTCTTACTTTGGGCATCAAGTCAGGGATTCACGCTGAAATGCGTACTGCTTTGGATACTTTGACGTTACTTGCAAGCGAACCGGGTGTTCAGATCTCACTAGACCATTGCGACGATTTGGTCGATAGCCTTGTCGAATGCGCCGAGGAGCAACTCGAGTTGCTGGCTGAACATGCGGCCGAAGTGTCGGATGTCATGCTCCTGTCTTCATATGAAGAGATATCCCGTGGATGTCAAACCGAGTGGACGTCACTAGCTGACGTTCCTGAATTCGGGAGCTTGGACTATGAACTGGACAGGGCCGTGGATCGTCTGATTTGTATTACGACCATTCTGCGCAATTTTTCGTTTACTGAGTCGAACTTTGGGGTGCTAGCAAGCCCTACGGTCATCAACTTCGTTGCCGCGATTATTCGTTATCTTGGAACCCGGAACATGCTTTTGCGAACACATCAAAACACCTTGGACTTTATGAAGGATGCTGTCATATATCTCAGTAATCTTGCTCATTTCATCCAACTGTCCGGAAAGGAAGAAGCCATTTGTCTCCTGCATTTTCTCTTGTCATTTGCTCCATTCCCGCTACCTACTGTGTCCTATGAGGGCATCATGTTCACACCTTATAATCCCGCTATTCACAAATATACGCCCGCAGCCGTTGACGGACTGGCCAAGCTGCTGGCACGAGATGATCCGAACCGATCTTTTTTCAGGGCTATCTTTTCTGGTGATGCATCCACGCCACCACATCCGGAATTACTCACCCGTGCATTTGGATTAGCCGTTTGTCCGATTCCTGACCAACCCCGGAAGCCATTGGCCATTGCGGATGCTCGCAAGGTCTTCTTGCTTCAAGGGCTGCTCGCGGCTGACATTCTCGCTGGGTTTGCTGACGCGCCACTTGCAAATGCCTGGCTCGAATCAATTGACGGTTTTGCGGTCCACCTTCTCCGACTTTCATGCTTAATGAGCACAGAACGTGTTCCGCCACCCTTTAATCCTCATACTCGCCAGTCCCAAGCTGCAAGATCGCAGATCGAAGCGGAAGCATATGCGTACAGTTCAATCATCAACCGGGGCTTGGCTATCTTACGTCGGCTTGCTGAGAAGTCGAAACAAGTCGACGACTCTTCCAAATTGCGGTTCCCATCCGGGATCATCCCGAAGAAAGAAAGTCTACTCGGGGCATTGCTAATGCCCAATGTGGACCCAGGCGTTATTCGGCAATTGATCACATATGCTCGGCTGGCAGATTGA
Protein Sequence
MNAWLADAPNLPSQDNGAFHPTTIDPSAAFLHPSPTPDPNQFQQRMFNGLSRNVSPGFQNPNQVIPSKRPRPEDGVAMSPRPAPGGLAASRSQTPHQVSFPGYQAPANGTPQFPAHPTPYQHLQRGASPSVTQSPVMQDFDQHSVQRMGTASPSPFSPAGPHVGSQMSPSQSDHPSRVNTPQSGAFMPPSHPFPQSMGPQFTPAPPAMTSAGVQAPMQAPFGTVPQGYQQAMAIQQQRLQAMQMQNPGRPMGMNPAMMGRPMAPGMNPMAHPQQVAAMRQMQQKPSSPEGFMRSLQKFMISRNLPLDPHPLVCGRPINLVQLYAAVMKLGGSKKVSAANMWPVIAQQLHFPPVQFPMAIQELREHYTRNLAAYEQAFLSTQQKQSADQQQPNSLPRTVSDPTGAQFQSPTNRQGQGFDAPQTLALPSAGNAASASNSMSHSAPNGFATPSQVKGSNKPPQHQHRLSMSRPSQPPDTPQDPSEQLSGPSATQPGGPGSQPGKPSDQSSDQPLQHPIEDPFKPTVLPESNLHGPIQVDEFAQLGEDISRLKPNVPAFAELGVIDIHALTLGIKSGIHAEMRTALDTLTLLASEPGVQISLDHCDDLVDSLVECAEEQLELLAEHAAEVSDVMLLSSYEEISRGCQTEWTSLADVPEFGSLDYELDRAVDRLICITTILRNFSFTESNFGVLASPTVINFVAAIIRYLGTRNMLLRTHQNTLDFMKDAVIYLSNLAHFIQLSGKEEAICLLHFLLSFAPFPLPTVSYEGIMFTPYNPAIHKYTPAAVDGLAKLLARDDPNRSFFRAIFSGDASTPPHPELLTRAFGLAVCPIPDQPRKPLAIADARKVFLLQGLLAADILAGFADAPLANAWLESIDGFAVHLLRLSCLMSTERVPPPFNPHTRQSQAARSQIEAEAYAYSSIINRGLAILRRLAEKSKQVDDSSKLRFPSGIIPKKESLLGALLMPNVDPGVIRQLITYARLAD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
-
80% Identity
-