Basic Information

Gene Symbol
sol1
Assembly
GCA_018248015.1
Location
DWHX01011980.1:1-2762[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.9e-28 7.7e-25 88.7 0.0 2 89 294 380 293 380 0.95

Sequence Information

Coding Sequence
ATGAATGCCTGGCTAGCCGACGCCCCGAATCTTCCAAGCCATGACAATGGTGCTTTCAATCCGACCACCATTGATCCTTCAGCGGCTTTCCTCCACCCGTCACCTACTCCTGACCCGAACCAATTCCAGCAGCGCATGTTCAATGGCCTGTCGCGAAATGTCTCTCCCGGCTTCCAAAACCCAAGCCAGGTGATTCCTTCCAAACGACCGCGTCCCGAAGATGGTATGACCATGTCCCCCCGACCAGCTCCCGGCGCCCTGTCCGCGTCGCGGTCGCAGACTCCGCACCAAGCGTCTTTCCCGGGGTATCAGCCACCTGCCAATGGCACGCCGCAGTTTCCTGCCCATCCCACTCCTTATCAGCATCTCCAGCGGGGAGCATCTCCTAGTGTCACCCAGTCTCCAGTCATGCAGGATTTCGACCAGAACAGTGTCCAGCGCATGGGCACTGCCTCCCCGAGCCCATTCTCTCCCGCCGCCGGCGGCCCGCCTGTAGGTTCGCAAATGTCCCCATCGCAGTCGGATCTTCCGAGCCGGGTGAATACGCCACAGAGCAGTGGGTTCATGCCGCCTAACCAGCCATTTCCTCACGCTGTTGCCCCGCAATTCACCCCGGGTGCACCACCACCTGCCATGACTTCGGCTGGGGTCCAGGCGCCCATGCAAGCGCCTTTTGGCCCAGTGCCCCCAGGGTACCAGCAGGCCATGGCGATCCAACAGCAGCGGCTGCAGGCTATGCAGATGCAGCAAAACCAAGGTCGCCCGATGAACATGAACCCAGCTATGATGGGCAGGCCTATGGCGCCCGGTATGAATCCTATGGCTCACAATCCCCAACAGATGGCGGCTGCCCGGCAGTTGCAACAGAAACCAACCAATCCTGAGGGTTTTATGAGATCCCTCCAGAAGTTCATGATGTCCCGGAATTTGCCATTAGATCCCCATCCCATAGTCTGCGGTCGTCCGATCAATTTGGTCCAACTATACGCGGCAGTTATGAAACTGGGAGGCTCAAAGAAGGTATCAGCGGCCAACATGTGGCCCGTTGTCGCTCAGCAGCTGCAATTTCCCCCGGTACAGTTTCCGATGGCGATCCAGGAGCTTCGGGAGCACTACACGAGGAATCTCGCACCGTACGAACAAGCCTTCCTCAGTACCCAACAGAAGCAATCGACGGAACAGAtgcaacagcaacaacaaaatTCGTTGCCTCGAACGATCAGCGATCCATCCGGGGCACAATTCCAATCCCCTGCAAGTAAGCCGGGCCAAGGCTTTGACACTCCGCAGCCACTCGCACACCCTTCGGCCGGTACTCCAGCATCTGTACCGTCCAATAGTATGTCACAAAGTACGCCCAACGGGTTTGCGACTCCTTCCCAAGTCCCGGGCGCGAACAAACCACCGCAACATCGCCTCAGCATGTCCTCATCTCAGCCGCCTGGGACTCCACAGGATCCCACCGGAAAACTACCAGGACCGGCTGTGCAGCCCGTAAAACCATCCGAAACATTGGACCAATCGTCCGATCAGCCCTTGAGACATCCGATTGAAGATCCCTTCAAGCCTATGGTTTTGCGCGATAACTATCCCCACGGCCCTATTCAAATGGATGAATTCGTTCAGATTGGCGAGGACATTTCGAGGTTAAAACCAAACGTGCCAGCATTTGCGGAACTGGGCGTCATTGACATTCATGCTCTCACCATGAGCATCAAGTCAGGAATCCATGCAGAAATTCGTGTGGCACTAGATACTCTGACTTTACTTGCCAGTGAGCCGGGCGTCCAGATCTCACTAGACCACTGCGATGATTTGGTTGAGAGCTTGGTCGAATGTGCTGAGGACCAACTCGAGCTGTTGGCGGAGCATGCAGCTGAAGTGTCGGATGACATGCTCTTGTCCTCCTATGAGGAGATCACCCGCGGGTGCCAGGCTGAGTGGACGTCACTAGCTGATGTTCCTGAATTCGGAAGTCTGGACTACGATCTGGACCGATCTGTGGATCGTCTTATCTGTATAACGACTGTTTTGcgcaatttttcatttaccgAGTCGAATTTTGGTGTACTATCAAGCCCGACGGTTGTCAATCTCATCGCCACGATTATCCGCTATCTGGGAACCCGGAATATGCTTTTGCGAACACATCAGAACACCCTAGATTTCATGAAGGATGCCGTCATCTATCTGAGTAACCTCGCTCATTTCATCCAACTATCCGGAAAGGAAGAAGCCGTCTGTCTCCTACATTTCCTCTTGTCATTTGCACCGTTCCCGTTGCCCACTGTATCGCCAGAGGGCATTCTGTTCACACCATATAATGCCGCCATTCACAAATATACACCCTCCGCGGTAGACGGTTTAGCAAAATTATTGGCACGAGATGATCCAAACCGATCGTTTTTCAGGTCCATTTTCTCCGGGGATGCATCCTCACCACCGCAACCGGAGCTACTTACCCGTGCATTTGGCCTGGCGATTTGCCCTGTCCCTGACCAGCCTCGGAAACCTTTGGCTATTGCGGATGCCCGTAAAGTCTTTCTGCTTCAAGGGCTGCTCGCGGCCGATCTTCTCGCCGGGTTTGCCGATGGGCCCCTCGCCAAAGCGTGGCTTGAATCAATAGACGGTTTTGCAATCCACCTTCTCCGGCTTTCCTGCCTAATGAGCACAGAACGCGTTCCACCACCGTTTAACCCTCACATGCGTCAGAACCAGGCTGCAAGATCACAAGCGGAAGCGGAAGCTTATGCATATAGTTC
Protein Sequence
MNAWLADAPNLPSHDNGAFNPTTIDPSAAFLHPSPTPDPNQFQQRMFNGLSRNVSPGFQNPSQVIPSKRPRPEDGMTMSPRPAPGALSASRSQTPHQASFPGYQPPANGTPQFPAHPTPYQHLQRGASPSVTQSPVMQDFDQNSVQRMGTASPSPFSPAAGGPPVGSQMSPSQSDLPSRVNTPQSSGFMPPNQPFPHAVAPQFTPGAPPPAMTSAGVQAPMQAPFGPVPPGYQQAMAIQQQRLQAMQMQQNQGRPMNMNPAMMGRPMAPGMNPMAHNPQQMAAARQLQQKPTNPEGFMRSLQKFMMSRNLPLDPHPIVCGRPINLVQLYAAVMKLGGSKKVSAANMWPVVAQQLQFPPVQFPMAIQELREHYTRNLAPYEQAFLSTQQKQSTEQMQQQQQNSLPRTISDPSGAQFQSPASKPGQGFDTPQPLAHPSAGTPASVPSNSMSQSTPNGFATPSQVPGANKPPQHRLSMSSSQPPGTPQDPTGKLPGPAVQPVKPSETLDQSSDQPLRHPIEDPFKPMVLRDNYPHGPIQMDEFVQIGEDISRLKPNVPAFAELGVIDIHALTMSIKSGIHAEIRVALDTLTLLASEPGVQISLDHCDDLVESLVECAEDQLELLAEHAAEVSDDMLLSSYEEITRGCQAEWTSLADVPEFGSLDYDLDRSVDRLICITTVLRNFSFTESNFGVLSSPTVVNLIATIIRYLGTRNMLLRTHQNTLDFMKDAVIYLSNLAHFIQLSGKEEAVCLLHFLLSFAPFPLPTVSPEGILFTPYNAAIHKYTPSAVDGLAKLLARDDPNRSFFRSIFSGDASSPPQPELLTRAFGLAICPVPDQPRKPLAIADARKVFLLQGLLAADLLAGFADGPLAKAWLESIDGFAIHLLRLSCLMSTERVPPPFNPHMRQNQAARSQAEAEAYAYS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00430396;
90% Identity
iTF_01496339; iTF_00430395;
80% Identity
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