Basic Information

Insect: Deinopsis erosa
Gene Symbol: ZNF236
Assembly: GCA_027574845.2
Location: JAODFZ020021345.1:1359-4833[+]

Transcription Factor Domain

TF Family: zf-GAGA
Domain: zf-GAGA domain
PFAM: PF09237
TF Group: Zinc-Coordinating Group
Description: Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.024 2.7e+02 2.1 0.2 26 46 123 143 114 147 0.83

2 9 0.059 6.7e+02 0.8 0.0 20 46 145 171 143 176 0.87

3 9 0.007 78 3.8 0.1 21 51 182 212 174 215 0.87

4 9 0.012 1.3e+02 3.1 0.1 20 45 258 283 251 290 0.83

5 9 2.9e-05 0.33 11.4 0.0 22 50 288 316 283 320 0.88

6 9 0.065 7.3e+02 0.7 0.1 26 52 431 457 426 458 0.86

7 9 0.0012 13 6.3 0.1 25 51 485 511 475 513 0.83

8 9 0.00032 3.6 8.1 0.1 22 45 575 598 566 604 0.90

9 9 0.11 1.2e+03 -0.0 0.6 19 44 656 681 649 688 0.75

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.024	2.7e+02	2.1	0.2	26	46	123	143	114	147	0.83
2	9	0.059	6.7e+02	0.8	0.0	20	46	145	171	143	176	0.87
3	9	0.007	78	3.8	0.1	21	51	182	212	174	215	0.87
4	9	0.012	1.3e+02	3.1	0.1	20	45	258	283	251	290	0.83
5	9	2.9e-05	0.33	11.4	0.0	22	50	288	316	283	320	0.88
6	9	0.065	7.3e+02	0.7	0.1	26	52	431	457	426	458	0.86
7	9	0.0012	13	6.3	0.1	25	51	485	511	475	513	0.83
8	9	0.00032	3.6	8.1	0.1	22	45	575	598	566	604	0.90
9	9	0.11	1.2e+03	-0.0	0.6	19	44	656	681	649	688	0.75

Sequence Information

Coding Sequence: ATGCTACTAGATGGAAGTGCATGCAATGACATAAAATGTCATTACTGTCATATGTCACTCAGGCATTGCGATAAgagaataactGAGTCCGAAGTGATTGAAACGCAAAATGTTGTAACAATCGAGCAGGAAACGAAACCGCGAAGATCTAATagtaaaattcattcaaatagcATTAAAAATACAGCAAATAGTTCGATAAAATGCTCATTATGTGATAAAACGTTTAAGAAACTAACGCAATATCGATTGCACATGCAGGAGCATCgcaatatgaaaaaattcaaatgcgAAATGTGTTTTGAGAGCTATAATGTTGAAAGCAACTTTAAGATACACATGGCAATGCATTCGAAAGGCGATCCGCGTTGTCCAATATGCGATAGAAAATTTCAACGGCAAGCAAGTCTCAAATCGCATTTACTCTTGCATCAAGTTGATGAAACATTTACGTGTACTGAATGTTTGGCTGAATTTGAGAAGGAGGAGGAATTGAATTCGCATTTAGAAACACATCAGAAGGAATCAGTTGAAGTGAAAAGCAGCGATGTGCCACTAACTTgctcattttgtaattatttattttacgaaTCGGAAAAGTATCAagaacatttaatattacatcttaggGCTAAAAGAATGGTTTTAAGTACGAAAAAGACTAGAAGGAagcattttaatgttaatcaTAAGACTTTACCGTTTAAATGCGATTATTGTCCGAAggcatttacaaaattttgtttattagatcGTCATAGAAGAATACACACAGGAGAAAAACcgtttattTGTCATATTTGTAATCGAGGTTTTAGTCAAAATGGGACGTTGcagattcatttaaataagcACACTGGCAAAAGACCATTCGAGTGCATATTTTGTTCAGCGAAATTCGCCCAAAAAGgtaATTTACGTGTTCATTTGGAGAAAACACATACAGCAGGCGCGCCAGgtgaaaaaatgttcaaatgtAATCACTGTCCTTGCATATTCAAAAGAGTCTCCTCGCTAAATGGACATATCACAAAATGTCATTCAAATAACACGCAGCAGGACAACAATATTAATATAGCTGACATTATAGATCAATTAAAAGAATTAGATAAGCAAACTAAACCTATTAATgctatagaaaagaaaattgaagtgCAAACTATGTCAAATGTTAGCGATACATTTGAAACTTCGTTTGATACTTACGTAAAAGTTGCTGATTCGAGCATCGATGGAGTAGTACGTCGCTATTTGATAAAGCAACGTAAATATGGTGATAATAAGTGGTATGTTTGTTCGCATTGCTATAAAGAATTCAAAAAACCATCAGATTTAATACGACATATTCGAATACACACGAATGAGAAGCCATTTAAGtgtaCGGAATGTGGACAGAAATTTACACAGAAATCAACGTTATTGAATCATAGGAAAACGCACTCGAAAACTATATTCAAATGTATGTATTGCTCGAAAATCTTAGCATCGGAGAGGACACTTAAAAgacatttaaaATTGCATGAATTGGataaaaatagtaattcaTCACATGCAACTTTCTCCTCTAAATCAAATGAGATATTGAGTGAATTAacgaaagaaaataaaatacataattttaatattattatgaagcAACCAATTATTGAGACGGAGAATGgttTATATTCAGTGCCTGCACCCAGACCGAAAGTACCTTACGCAACCTTAGAACAATACAAAAATCGTCCATTTAAATGTAACATATGTAATGCGGCATTTCTAAAAAGTGTGCACTTAAAACGTCACATGCAAACTCATATCGGCGTGAAGAATTTTGAATGTGAATTGTGTCAAAAATCATTTTTCACACAGTATGCGCTCAAAGAGCATATGACTTATCACACAAAGATAAAGAATCATGCTTGTAAAACATGTGGAAAGCGTTTCTAtacgaaaaatttattaaaacggcATATGCCTAGGCATAATGTTACTAAACCTTATATTTGTCCCTACTGTAAGAAGCGCTTTAAAATGGAACAATTGTGTAGGAAACATATGAGGCGACATAAATTGGAAATACAAAATTCTattttAGCATTGTCTGAAACTGGGGAATTAAAAGATGTTGAAAGTGATAAAATTATGGAAATGTTTGATGGAAATATTATGATTGAATTGCAAGATAGCTTAACGCCAATTGaaacttataataatatttcaacaatGGAGAGTAAATTGTTGAGTAATAATAAGGTTGAAGATGATATCCAGACTGATGAAATTGTCATACAGAATGGGgataaacaagaaaatattaatttggtGGATAaggtaagttaa
Protein Sequence: MLLDGSACNDIKCHYCHMSLRHCDKRITESEVIETQNVVTIEQETKPRRSNSKIHSNSIKNTANSSIKCSLCDKTFKKLTQYRLHMQEHRNMKKFKCEMCFESYNVESNFKIHMAMHSKGDPRCPICDRKFQRQASLKSHLLLHQVDETFTCTECLAEFEKEEELNSHLETHQKESVEVKSSDVPLTCSFCNYLFYESEKYQEHLILHLRAKRMVLSTKKTRRKHFNVNHKTLPFKCDYCPKAFTKFCLLDRHRRIHTGEKPFICHICNRGFSQNGTLQIHLNKHTGKRPFECIFCSAKFAQKGNLRVHLEKTHTAGAPGEKMFKCNHCPCIFKRVSSLNGHITKCHSNNTQQDNNINIADIIDQLKELDKQTKPINAIEKKIEVQTMSNVSDTFETSFDTYVKVADSSIDGVVRRYLIKQRKYGDNKWYVCSHCYKEFKKPSDLIRHIRIHTNEKPFKCTECGQKFTQKSTLLNHRKTHSKTIFKCMYCSKILASERTLKRHLKLHELDKNSNSSHATFSSKSNEILSELTKENKIHNFNIIMKQPIIETENGLYSVPAPRPKVPYATLEQYKNRPFKCNICNAAFLKSVHLKRHMQTHIGVKNFECELCQKSFFTQYALKEHMTYHTKIKNHACKTCGKRFYTKNLLKRHMPRHNVTKPYICPYCKKRFKMEQLCRKHMRRHKLEIQNSILALSETGELKDVESDKIMEMFDGNIMIELQDSLTPIETYNNISTMESKLLSNNKVEDDIQTDEIVIQNGDKQENINLVDKVS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00430035;
90% Identity: iTF_00430035;
80% Identity: iTF_00430035;