Basic Information

Insect: Deilephila porcellus
Gene Symbol: -
Assembly: GCA_905220455.1
Location: LR999974.1:11055187-11063889[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 6.1 4.6e+02 2.0 1.0 1 23 54 77 54 77 0.95

2 21 0.14 10 7.2 2.8 1 23 84 107 84 107 0.96

3 21 3.6 2.7e+02 2.7 4.3 1 23 190 212 190 212 0.97

4 21 0.0025 0.18 12.7 1.2 2 23 218 239 217 239 0.97

5 21 8.8 6.5e+02 1.5 2.6 1 23 245 267 245 268 0.93

6 21 0.097 7.2 7.7 3.4 2 22 490 510 489 510 0.96

7 21 3.3 2.5e+02 2.8 1.0 1 23 608 630 608 630 0.82

8 21 0.51 38 5.4 0.3 2 23 765 786 764 786 0.96

9 21 0.0024 0.18 12.7 0.1 2 23 865 886 864 886 0.97

10 21 0.22 16 6.6 2.1 1 23 894 916 894 916 0.98

11 21 0.15 11 7.1 3.2 1 23 953 975 953 975 0.95

12 21 0.00023 0.017 15.9 4.0 1 23 983 1005 983 1005 0.99

13 21 0.23 17 6.5 2.6 1 23 1090 1112 1090 1112 0.98

14 21 0.17 12 6.9 0.4 1 19 1167 1185 1167 1186 0.97

15 21 0.031 2.3 9.2 0.1 1 23 1195 1217 1195 1217 0.96

16 21 0.0016 0.12 13.3 0.6 1 23 1286 1308 1286 1308 0.96

17 21 0.013 0.94 10.5 1.1 1 23 1314 1336 1314 1336 0.96

18 21 0.0065 0.48 11.4 2.6 1 23 1426 1448 1426 1448 0.97

19 21 0.00016 0.012 16.4 1.4 1 23 1454 1476 1454 1476 0.99

20 21 0.71 53 5.0 2.2 1 23 1567 1589 1567 1589 0.96

21 21 0.0034 0.25 12.3 3.7 1 23 1600 1622 1600 1622 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	6.1	4.6e+02	2.0	1.0	1	23	54	77	54	77	0.95
2	21	0.14	10	7.2	2.8	1	23	84	107	84	107	0.96
3	21	3.6	2.7e+02	2.7	4.3	1	23	190	212	190	212	0.97
4	21	0.0025	0.18	12.7	1.2	2	23	218	239	217	239	0.97
5	21	8.8	6.5e+02	1.5	2.6	1	23	245	267	245	268	0.93
6	21	0.097	7.2	7.7	3.4	2	22	490	510	489	510	0.96
7	21	3.3	2.5e+02	2.8	1.0	1	23	608	630	608	630	0.82
8	21	0.51	38	5.4	0.3	2	23	765	786	764	786	0.96
9	21	0.0024	0.18	12.7	0.1	2	23	865	886	864	886	0.97
10	21	0.22	16	6.6	2.1	1	23	894	916	894	916	0.98
11	21	0.15	11	7.1	3.2	1	23	953	975	953	975	0.95
12	21	0.00023	0.017	15.9	4.0	1	23	983	1005	983	1005	0.99
13	21	0.23	17	6.5	2.6	1	23	1090	1112	1090	1112	0.98
14	21	0.17	12	6.9	0.4	1	19	1167	1185	1167	1186	0.97
15	21	0.031	2.3	9.2	0.1	1	23	1195	1217	1195	1217	0.96
16	21	0.0016	0.12	13.3	0.6	1	23	1286	1308	1286	1308	0.96
17	21	0.013	0.94	10.5	1.1	1	23	1314	1336	1314	1336	0.96
18	21	0.0065	0.48	11.4	2.6	1	23	1426	1448	1426	1448	0.97
19	21	0.00016	0.012	16.4	1.4	1	23	1454	1476	1454	1476	0.99
20	21	0.71	53	5.0	2.2	1	23	1567	1589	1567	1589	0.96
21	21	0.0034	0.25	12.3	3.7	1	23	1600	1622	1600	1622	0.98

Sequence Information

Coding Sequence: ATGCTTCAGCAGATGTCCTCGCCGTCGAGCGCACAATTAGGCGAGGTCGCGACTGCCGTGCGCACCTTCGAAGGCCGCGCCTGCGGCGACTTGTCTTCGGGGGCCTCTTCAGATGCCGCCGAAGATTTTGAACTGCCGCACTGCAAGATTAAAAGAAACTATAGTTGCATGAAGTGCACCTACTACACGCAGAATCCGCGCGCTTATCTTATGCACACGCGCGACGTTCACTTTGTGAAATTGAAGATTTTTGATTGCCCACATTGTCTATACGCTTCGAGACATTATCAGAAACTCGTAAGACACGTCAAGATGGTTCATGGGGGATCAGCGTCCGAAACGACCGCTAAAGTGGAACCAGAAGCGCCGACACCGCTTTTTGAACCGGAAGATGTCACAGAGAGGATGGAAGACATGGTAGAAGAAATCGAAGACACAGAAGACATACAGATGGATGTAGACGATGCTATTGAGGAGCAACCCGATCGCTCTGATGATGTGGATGTAGAAATTGAGAGAATTTCAGATCGAAGTACTTCAGATACACCAAAAAATAAAGGGAACTTTTTTTCATGCGATAAGTGCAACTATGTGACACATTTACGTGCGAGGTTCACAAAACACGTCAAGTATCACTCAATGCCGATGATTAAGTGTACCACATGTGATTTCCGCACACCTTACAAATGGAACTTGGACCGGCACATGAAGAACCACGGCGGCAACGGAAGCTTCCACTGTTCCATGTGCAATTTCACAGCTGATATCAAACAAAGTTTGACAGTCCACGAAATAAATCATCACACGCCGCCAGTGGGCTGCACTCCCGCAAGTCGCCGCCGCAATCGAGTCGGCGCGAGCGACCAGTCGCTAGCTGAGGCGGCAACCGCGCTGCTCTCTAAGGAGGAAGAAGGGAGCAGCGATTCACGATCCTCACATTCGGCCTCGGAAAAGGACATAATCACATCAAACAGTGATTCCAATGATGCTGAACCAGGAATGAAAGAATCGTTGCGAGATCAAACTCACGCAATGAATGAAAATTCACAAGACTCGAAGTCAAATAAACAATGTAAGAAAACTCCAAGACCCATACCGCAACTTATTCCACTGAATGCATCCACGCCCAATCAAAATAAAACATCTCCCGGCGAACCGCCGGCAAAGAAATTCAAAGAATCAACGAATGAAACTAGTAACCCTAGCTCAGAAAGTAAATCCGACAGTCAGCCGTTCGTCCCTTCGATGAATGCAAAAGAGTCGGGAACGCGAAAGAAAAATGAATCATTTTTTGATCGATTAAAAGAAAGACTTCTCACGGAGACTGGAGAAAATGGTTCCCTCACATGTAAAAATTGTGGCTTTGAAAGCAAATGTTTATCAGAACATTCTGTGCATGAAAAAAATTGCACGCCATTGGGAAATCGCACTACCACAAATACATTGATGTCTAGTTTAAGTTCAACACGTTGTCAGAACTGTAGGCATAGATGCAAATCAAGCGCTGATTTACTTGTTCATATGAAAACGTGCAGAAAAGCTGAGAGAGTGGAGGATGTGACATATGAAGATACAAAGAGTCAAGAAAGTAGTGAAGTTTCTTCTAAAACGGAAAAAGATAGCGAACCCCATCCTATGGAAAATGTAGTTTTTGTATGGAATAATATCAATCACGAGTCATCCAAGTTCGACACACCGTTAGACATTAATATAAATGACGATTCAACGCTTCCAGAAATGAATCGAAGTTATGAAAATGATATAGTCGATGATAATGAAAGTATGAACTTATCCCCAAGTCAAGCTGTTGGGAAAAATGTTTTTAAATGTCCTCACTGTCCATTCTGGGCCTCTACAGCATCTAGGTTCCACGTTCACATTGTAGGACATTTAAATAAAAAGCCCTTCGAATGTTCTTTGTGCAAGTATAAATCTAATTGGCGTTGGGACATAACGAAACATATAAAACTGAAGTCCGCTAGAGATCCTGAGCATAATGAGGCCAAAGTGCTTATGACTGACGAAACTGGTAGAAGGAATTATAGTAAATATAGCAAATTCTTGGCAATGCCAGTTTTAAATGAAAATGGTGAGAATGAATTTCATTACTTGGATTCAAATACAGCTGTTGATGCTTCAATGGAAATTGATGAGTCATTCAGTGACGCGAATGACGTGACAAATGCATCAGGTGACATGCAACCTCTCAACCTACAGACCCAGCACAGCGAGCTCAAATCAGATGCAATGGATATGAGACAAGCAGACAAGAAAGTGAAGAAAACATTATGGAAATGCAAAAAGTGCAATTATAGAGATCCATCAAAAGAGGCTCTACTGGAGCACGTTCGAGAACATTCCAGAGTGGACGGTAATGACGAAGATCCGAAAAATCTTAGTGGAAAAAAACCTGAAAGCACACCAGACCCATCGGACTTGGCATACCGTTGTGGTCACTGCAATCAACTATCCAACTGGAAACATGTCATACAGCGCCATTGCCGATTGAAGCATGAAGGTGTTATCAAAGTAATTACTACGGTAAAGCCCAAACCGGACCCGGTGACTTCTACAGGTGATCCAAACAACGACAGGTGTCCCAAATGTCCATATCGAACAGCCGACAAGAATGGCCTTATAACTCATATCCAGCAACATCAGCCTTCCACACATTCCATATTCAAGTGTTATTTCTGTCCATACTTCGTCAAGGATGAATGCGAGTTAGTGTCACACTTACAACTTCACGGCGTCACAGACCCAGAGGATTACATTTCGAAAGCCATGGGGTGCAGATCGCCGTTACCAGAGCCGCAGTCTGTTCTTGCTCCTTCTATCTCGGGCAGCACAAAACGACACCGGTGTACAGAATGCCCTTACGAGACAAATAGTAAATCCCAATATATGTATCACGAGCAGTTCCACAGACTGCCACCAGACACCCCATACAAGTGTCCAGAATGCAACTACAGTGTGTCTAAAAGACATTTACTTCATCAACATTTAAGAGTACATGGTATTATTCCGAAGAAACACGAAACAGAAGCAGATTTGGAAGCTGTGCCATCCATTCCAAAAATAGAAAACAACACGGATGTACCTACCAACAACCTAGATGAGACACCATTTGTTTGGGTATCAGCAAAAAATGAATTCCATAAAATGTACAAATGCCGTTACTGTTCGTATGTGAATTCGCAAAAATGTAAAATACCCTATCATGAAAAAATTCATTGCTTCAAATTCGAAAATAGTGATGTAACGGTGTACAAATGTTTGGAATGTAAATTTACTTGTGATAACTCGGGAAGATTAGCAGAACATTCTAAATCTCATGGTGAAATATACGGTCGAATTTATTGCCCAGTAGAAGATGACGTTCCAGATGAAGAACAAGTAGCAAAATTACGTAAAGTAATCGCTCTAGAAAAATCAAATAGTGCTGAAGTTCCCAAGGACGAACTCGTTATAATTGAAAACAAAGAAATCAAATTATTATATTTCTGTCAAAAATGTCCAGCGAGATATTTTACTGAGAGCGAATTAAAAGTTCACGACGCCTTCCATGATTCGACGTATTTGTATAGATGTAAGAACTGTGATTTCTCAGTACCCGAACAAGATGAGTTAATATTGCATAATATTGTACACACAGACGAATATCATACAAAAACCAAAATGCTTAAATTTGTCCACAACCTGCATCCTTTACACAAAGAGCCTCGGCTAGAACTTGTTCATTGTCAAGATACCTTAGATATCGTATGGGTAGTAAATCCTATTAAACAAAATGAAAATGACAATATTGAAATGACTAGTAAGAAACACAATGAATCGAGACACATACCTAAACAATATACTTGTAAAGAATGCCCTGCAAAGTTTTTCAAAAGTTCTGCACTCAGTTATCACATGGGTCTACATGGAAGCGAAGGTGAACATAAGTGCAAAAAATGCAGTTACGCAGTCAAAAACGTTGGAAATTTAGCAAAACACGAACTTTTGCATGAACAGGAAAATAAAGCGAACAACTGTGATTACGAATCTGGAGAGGATGTTGATTATAAAAATGTTCCATTATCAGGAACCGATCTGTTCCAGAGAAAAACTGAAGCTCAAAAGAGGGTATTAATCGATAAAGATAAATTAGTCAAACCCAATGACCATTTTCCACCTGTGCTTCAAGCTGATCCTCAATTTGGTTATCTTATGCACGGTAACCCTGAATTTATCTACCCAACATACTTGAAAAATGGACGCCAAAAAGAAAAGCGTTACAAATGCCATAAGTGCCCTTCCGCTTTCGAAAAACGAGAGCAATACAAAATCCATCTCTCATTGCATGGATCTAAGCAACGATATAAGTGCGAACTTTGCGATTACTCCGTGAAGTACTACGCCAACTATGTTCAACATATGAGGAAACATCAAATGAATGACGAAGCTCAAGCTGAAAGGAAAAAAGGCGGTAGTGGGTTTTCTGAACCTGAAAGCCACGATATTAAACAAGAAGACAGTTCAGATAACATAAAGCTAGCGATAAAAACGATACCCAGGGGAACACCCAAAAGTGATTTCCAACAGTTCTCGATCAGGGACCAACAAACACTACGACTACTACAGCGAAGACGATCTATAACTAACGCAGGAAAAGAAACCAATACTACAGAAACATCGCCAACAAAAGAACGCAAGTTACATATGTGTTTGTTGTGCCCATACACCAACCAGCGACAGGATGCCTTGACCAATCACTACAAACGGCATGATGATAGCGACGCTCTAACCACGGGTAACCACAAGTGCTCTTACTGTGACCTTGTTGTTATTCAATCTCATTTCCTTCGCGAACATTTAAAAACGCATTTTAATTACCACAAAACTCTCACTCCCGAATGTTTTGTGGCAAACGAAAATGTCAGTTTTACCATAACAAAAGTGGACGATAAAAGTGAGCCGGTTGATCTCAAATTAGATTTCCAAAATAAGAACTATAAGTGTAATGAAGAGAAAATTTTCGTAAAAATGAATACTGGAGAGTTAATGGTAGAATAG
Protein Sequence: MLQQMSSPSSAQLGEVATAVRTFEGRACGDLSSGASSDAAEDFELPHCKIKRNYSCMKCTYYTQNPRAYLMHTRDVHFVKLKIFDCPHCLYASRHYQKLVRHVKMVHGGSASETTAKVEPEAPTPLFEPEDVTERMEDMVEEIEDTEDIQMDVDDAIEEQPDRSDDVDVEIERISDRSTSDTPKNKGNFFSCDKCNYVTHLRARFTKHVKYHSMPMIKCTTCDFRTPYKWNLDRHMKNHGGNGSFHCSMCNFTADIKQSLTVHEINHHTPPVGCTPASRRRNRVGASDQSLAEAATALLSKEEEGSSDSRSSHSASEKDIITSNSDSNDAEPGMKESLRDQTHAMNENSQDSKSNKQCKKTPRPIPQLIPLNASTPNQNKTSPGEPPAKKFKESTNETSNPSSESKSDSQPFVPSMNAKESGTRKKNESFFDRLKERLLTETGENGSLTCKNCGFESKCLSEHSVHEKNCTPLGNRTTTNTLMSSLSSTRCQNCRHRCKSSADLLVHMKTCRKAERVEDVTYEDTKSQESSEVSSKTEKDSEPHPMENVVFVWNNINHESSKFDTPLDININDDSTLPEMNRSYENDIVDDNESMNLSPSQAVGKNVFKCPHCPFWASTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNEAKVLMTDETGRRNYSKYSKFLAMPVLNENGENEFHYLDSNTAVDASMEIDESFSDANDVTNASGDMQPLNLQTQHSELKSDAMDMRQADKKVKKTLWKCKKCNYRDPSKEALLEHVREHSRVDGNDEDPKNLSGKKPESTPDPSDLAYRCGHCNQLSNWKHVIQRHCRLKHEGVIKVITTVKPKPDPVTSTGDPNNDRCPKCPYRTADKNGLITHIQQHQPSTHSIFKCYFCPYFVKDECELVSHLQLHGVTDPEDYISKAMGCRSPLPEPQSVLAPSISGSTKRHRCTECPYETNSKSQYMYHEQFHRLPPDTPYKCPECNYSVSKRHLLHQHLRVHGIIPKKHETEADLEAVPSIPKIENNTDVPTNNLDETPFVWVSAKNEFHKMYKCRYCSYVNSQKCKIPYHEKIHCFKFENSDVTVYKCLECKFTCDNSGRLAEHSKSHGEIYGRIYCPVEDDVPDEEQVAKLRKVIALEKSNSAEVPKDELVIIENKEIKLLYFCQKCPARYFTESELKVHDAFHDSTYLYRCKNCDFSVPEQDELILHNIVHTDEYHTKTKMLKFVHNLHPLHKEPRLELVHCQDTLDIVWVVNPIKQNENDNIEMTSKKHNESRHIPKQYTCKECPAKFFKSSALSYHMGLHGSEGEHKCKKCSYAVKNVGNLAKHELLHEQENKANNCDYESGEDVDYKNVPLSGTDLFQRKTEAQKRVLIDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKGGSGFSEPESHDIKQEDSSDNIKLAIKTIPRGTPKSDFQQFSIRDQQTLRLLQRRRSITNAGKETNTTETSPTKERKLHMCLLCPYTNQRQDALTNHYKRHDDSDALTTGNHKCSYCDLVVIQSHFLREHLKTHFNYHKTLTPECFVANENVSFTITKVDDKSEPVDLKLDFQNKNYKCNEEKIFVKMNTGELMVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01359347;
90% Identity: iTF_00819621;
80% Identity: -