Dpor022766.1
Basic Information
- Insect
- Deilephila porcellus
- Gene Symbol
- -
- Assembly
- GCA_905220455.1
- Location
- LR999976.1:10933963-10942778[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.0041 0.31 12.0 1.1 3 23 207 228 206 228 0.96 2 23 0.15 11 7.0 0.3 1 22 612 633 612 633 0.95 3 23 0.88 65 4.7 0.3 1 23 675 698 675 698 0.92 4 23 0.0018 0.13 13.1 1.8 3 21 709 727 709 728 0.96 5 23 1.1 80 4.4 0.1 2 23 736 758 735 758 0.89 6 23 1.3 93 4.2 0.2 3 23 779 800 777 800 0.92 7 23 0.0009 0.067 14.1 1.9 1 23 806 829 806 829 0.96 8 23 0.093 6.9 7.7 0.0 1 23 855 878 855 878 0.90 9 23 0.0041 0.3 12.0 3.5 1 23 883 905 883 905 0.97 10 23 0.013 0.95 10.4 0.2 1 23 911 934 911 934 0.95 11 23 0.00075 0.055 14.3 1.2 1 23 947 969 947 969 0.98 12 23 0.004 0.29 12.0 4.3 1 23 1018 1041 1018 1041 0.96 13 23 0.0034 0.25 12.3 1.8 1 23 1101 1124 1101 1124 0.97 14 23 0.0015 0.11 13.4 1.5 2 23 1148 1170 1147 1170 0.95 15 23 0.073 5.4 8.1 0.2 2 23 1176 1198 1175 1198 0.95 16 23 0.0074 0.54 11.2 0.2 1 21 1242 1262 1242 1263 0.95 17 23 0.00091 0.068 14.1 0.6 1 23 1273 1295 1273 1295 0.93 18 23 8.3e-05 0.0062 17.3 0.3 2 23 1383 1405 1383 1405 0.93 19 23 2.5e-07 1.8e-05 25.3 1.4 3 23 1412 1432 1411 1432 0.98 20 23 0.03 2.2 9.3 2.0 1 23 1450 1472 1450 1473 0.96 21 23 0.14 10 7.2 0.0 1 23 1494 1516 1494 1516 0.97 22 23 0.0089 0.66 10.9 0.4 1 23 1522 1545 1522 1545 0.95 23 23 1.8e-05 0.0013 19.4 0.5 1 23 1553 1576 1553 1576 0.96
Sequence Information
- Coding Sequence
- ATGAGTGTGAACTATGACCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGATTTACTGCCGATTTTTCCTACCACCAGTTCCGATGACTCGGAACCTCCCGTCCTCGCTTCGAAAATTAAGGATTGCGTGTCCATACAGATAACCGAAAATGACGACTTGCCGACAAATGTCTGCAGGAAATGTATGGACAATGTCAATAACTGGCATGTATTCAAGAGAGTGTGTGAAAGGACTCAAAACAAACTACAGTCTCTGATTAATAAAGATGGCAGCCAACTAGAAGAGGTGAAAATAAAGAGTGAACCATTGTCTGATGAGGCTTATGATGATGGAGTGGTCATTGATGGAGGATACCATGACAATGAGAACACCACTTCGAGTAAAATGCAGCCAGAAGGGCCCCCAATCTTGGCGTCGCTGGGGCTCACGCCAAGGAGTGATAAGGGCATGGAGAGTGAAAAAGACGAAGAAGACGACGACGAGGAAGAGATGACTGAATCTGCTCAATCATACTCCAAGGTAGCGAATATGCCCGAAGTGTCCATCACCGTGATGCGGCCTTCGGGAGAAACCCTGCACGCGCGGCAAGGCATCCAACAGTTAGCCTCCAAAGATTGTCTCGTCTGCGGCAGAACCTATAGATACTCTCATAACGCCAGGCGACACGAACTCACCGCTCACAGCTTCGATAGGTACACAAACAAAGTTACTAATAAGAAGTCTCACATGCGACTACAACCCAAACTGAGACCCAACCCATTTAATCCTAAAGCGAGATTAATGCCAAATCCTATTAGCCACAAAATGCAATTTATACCTAAGAATATACCGGCTAAAATTACACCACAGAAAGTTATTACCCCACCGAAACCCATACCTATAAAGACAGCAAAAGCGCCACAAAATAACCTTCCGTATCCTCTTCGAATTAAAGCGCTTAAAGATTTACAAATAAAGAAAAAAGAACCGCAAATATTAAAAACATTGCTGACCACAAAACCCGAAGTTTTAGTGTCAGAACCAGAAATTATAAATTCCGGCCCAGAAAGTCCGGAGACATTGATATCTGAACCGGAAATTGCGTCATTCCAAGTAGAAACTATTCTGTCCGAACCGGATCCAGAGGCCTACGACCACCACCAGGGCGACGATGAAGCGGATGGTGATATGCACAATAATCAGAATCAAAATTACGACACTGTCGATATGGATTCTGAAAATGAAATTGAAATTGCCAGACAGCAAGAAAATCACCATGACGGAGACGAACAAAGCGAAATGCATGATATGCATCATGATGATGATAATCACATGGACGGAGGTCAAAGTGATAACGACAAGGACCAAAATGATGAGACAGTTGACAGTCAAGATAACATGGTCATCGATGAAAATGCAGAAATTAAAACAGAGGAATATGACGGTGAAGACGGTGAAAAGGGTCATGAAGATAAGGATCACGAGGAAAACTACATGAATCATGACGAAAATGACGAGGATGATGAAGAAATGCCGCCGATAGGTATAACACCTGTCGTAGAAATAAACGAAGATCTTCAAGGTAATTCCTATAATAGTGAACTTAACGAAGAAGAAGAAGAAGAGGAAATGGACGAAACGGGTGATCCTAACGACACCGTCGATGATTCCATGAAGGAACTGGACCCTGACAAATTATATGTCACAAAAACGCAAAGGGACTTTATCTTAAAGTACCGCGATGTCATTGAGCAAATCAACACGAAGCGTTGCTTATGCTGTGATCGAGAACACCCTCGAAGGAAAGCCGTTATTCAGCATTTACAGAAAAATGGGCACAAGGTCCCCAAACATACGTGTTATAATTGCGTCATAACTTTCGGTCATATTGGCGCTCTACTTAGCCATATGAGATCGAATTCCTGCACTGATCTCTGGAAAATAATTTACAACGAAAATGGTATCACCGATGACTTGGTTTTGGAAGATGAGCCGAAAGACAATAAGGTGCAATATAAGGATATTTTCAATGCAAGGTCGTATGCTTGCAAGCTGTGTCCGGCGAAATTCCAGCTAAAACAATTTATAATGAAACATATGCTAGACGTTCATGAAGACGGACAGTCTAGAGTGCCTCTAGGTTGTGTCCATTGTAGGGCCAGATTTAAGGATAAAAGTTTATTGAAAAAACATATACGTAACGGCGAATGCACGGTGTATATTTCCTGCGATTTGTGCTCCGAAAAGTTTGGAAACATGCAGGATTTCAATGACCACGCTTTGGCAGTCCACGCCGGCAGCTTTGACCAGTCGGACAACGCGAGTAAGTGTGTAGACGGCCGGCCGACCGACTGTCCTCTATGTGGCAAAAAGAACAGCAACTATCCAATATTAGTAAAGCATTTGAAAACTGTTCACAATGAAGAGAAACCTCATTACTGTCAGCATTGTGACGCTAAGTACGAGCAAGCTGCTGACCTCAACAAACACATTTACACGGAGCATTCTGACAGGACGTTGGGCATACAGAGTAACGAGCCCGACATGTCCCTGGTCAAAGAGGAGGCCGAGGAATATCACTATTCGTGTACAGAATGCAACGCTATCTTCGAGACAGTGGACGCGTGGACCGATCACCAAGTGGCGGAACACAACCAGGTGGCGCACCACTGCGACCAGTGCGATAAGAAGTTCTTGCGGCCGTCAGAACTCGCTGAACATAAAAACACACATTTGCGAGTAAAATTCTATCCGTGCAGCGTTTGCTCTAATTCATACAGCACCCCGCAGAAACTCTCCGAGCACGTCCAACAAGCCCATCCCGGTGTGAGAGCGTTATCTAACGCGGAATCCGAATTTTATTGCGAGATATGTATTAGATCATTCAAGAGTCGTCAAGCCTATTCCAATCATATGCGTATTCACGCGAAGGTTCCCACCACTAATAGGAAACCGGGTGAACCGAAAGGTTTCGCACCGCAGATCATCGGAAAACCCATCAAACAGTTGACAATGATGCAGCCTGGGTTTGTTTCATTCAAGCCGAGTTATAACGTTCCTAACGCACCTTACTGTTGCGATTTATGCGGCAAAGGATTCATGCACAAAAAGAACATTTGGAAGCATAAGAAAGTGTTGCATGCTGATATTTTAAAAGATCGAAATGACAGCGAAGAAAATACTATGCAAGCGTCAACTGAAGATGAAGAATTTAATAATGAGGAAAATGGCACGGGATTATCGACGCCGCAATTTAATAGCTTCAATTTTACCAACTTTACGAGTAATTCCCAACAATCGCAGTCGGACGGCTTTGCTTACTCGTGTGAGCTGTGCTATCAACGCTTCCCACTGCGCAGTAGTTTATGGAAACATAAACGGAACAAGCACGGTATTATAAGTTCTTTTGATGGGTCGGAGGGCCAATCGCAACCGTCAGGTGACGGTAGCAGTAGATCCAGTTGCACAATTTGCAAAATAACATTTGCGGACAAGAAATCCTATTACCGACACAGAAAGAACGTCCACAAATCATCCGTGCAAATGTGCAAACTGTGTGGAAAACCACTCAACTCTACGTTGGAGTTGTATGAGCATTTAAAATCGGCTCACGCACAGGAACTATTGGGCTATAACGCAAATCAAGGTTCGAGTAAATCTCAAGAACCGCCACAAGAAATGGAACCGGAGTACGATAATGACCAGGAGGCCGTCGACCCGAGCGTCGATTATCAAGCGAGATATCCTTGTGACACTTGCGGTAAACAGTTCGTCGGATTGCTCGCTTTGCAGAACCATCAATGTATCAATCAACTCCCGAGTCAACCGCAAACGTTTGATTGCGAAATTTGTCACAAGAGCTATACATCCATTGCCGCCCTAAAAAGTCATCGCGGTTGGCATTTACGCTCGCCAGACGGCAAGGCGGCCGCCAACAATTCTGGCTTATGGATGCCCCAGCACAAGGTGACGAACAAAATTAGCAAATACGAGGTCGTGGATCCCTCGCAGTTAGCCCGAGTCACGCATTCGACGCCCGCCTCTGTCGCGAAGAGAAGATTACCGCCTGAAGTCGAGGTGACAGTGGTCAATCCGAACAAGAAATTGCGGTCCGACGACTCCATAGAAATGGAGCAGCACAGTTCTGGCGCCCTCGAGGACAGATACTGCACCATTTGCGACAAAGAGTTCACCAAACGCGCCGCATATCAACGACACATGGACGAGGTCCACCAGCCCAACTCGGTGTTCTGTCCCGTCTGCGACAAGAGCTTCACGCGGAAATCGACACTACTGGTGCACATGAAGAAGCATTACGAAGGCGGCGAAGGCAGTTCGTCGACGGCGATGATGGACGACGACTCGTACTCGTGCGACCTGTGCAACGCGCAGTGCGACAGCGCCAAGGCCCTGCGCGCGCACCGCGAGCGGCACCACGGCTCGGAGTCGGGCGACTCGGACGACGACGGCGCCGCGCCCGCGCAGCAGCCCGGCGAGTTCACGTGCGCGCAGTGCGGCGACGGCGTGGCCACGCCGCGCGACCTCATCGCCCACCGCACCATGCACTCCACGCCCACCAAGTTCTTCTGCAACATCTGCAAGGTCTACTTCGCGAGGGCCATCGACCTGTCCTCGCACACGCGAGCGCGACACTCCGACAACGAAAAAGTGTTCTTCCCCTGCTCCATGTGCGACCGCTCCTACATGAACAAGAAGAGTTTACAGAGACACATCGAGATGGCGCACTGA
- Protein Sequence
- MSVNYDRVCRLCLSSRGDLLPIFPTTSSDDSEPPVLASKIKDCVSIQITENDDLPTNVCRKCMDNVNNWHVFKRVCERTQNKLQSLINKDGSQLEEVKIKSEPLSDEAYDDGVVIDGGYHDNENTTSSKMQPEGPPILASLGLTPRSDKGMESEKDEEDDDEEEMTESAQSYSKVANMPEVSITVMRPSGETLHARQGIQQLASKDCLVCGRTYRYSHNARRHELTAHSFDRYTNKVTNKKSHMRLQPKLRPNPFNPKARLMPNPISHKMQFIPKNIPAKITPQKVITPPKPIPIKTAKAPQNNLPYPLRIKALKDLQIKKKEPQILKTLLTTKPEVLVSEPEIINSGPESPETLISEPEIASFQVETILSEPDPEAYDHHQGDDEADGDMHNNQNQNYDTVDMDSENEIEIARQQENHHDGDEQSEMHDMHHDDDNHMDGGQSDNDKDQNDETVDSQDNMVIDENAEIKTEEYDGEDGEKGHEDKDHEENYMNHDENDEDDEEMPPIGITPVVEINEDLQGNSYNSELNEEEEEEEMDETGDPNDTVDDSMKELDPDKLYVTKTQRDFILKYRDVIEQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVITFGHIGALLSHMRSNSCTDLWKIIYNENGITDDLVLEDEPKDNKVQYKDIFNARSYACKLCPAKFQLKQFIMKHMLDVHEDGQSRVPLGCVHCRARFKDKSLLKKHIRNGECTVYISCDLCSEKFGNMQDFNDHALAVHAGSFDQSDNASKCVDGRPTDCPLCGKKNSNYPILVKHLKTVHNEEKPHYCQHCDAKYEQAADLNKHIYTEHSDRTLGIQSNEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCDKKFLRPSELAEHKNTHLRVKFYPCSVCSNSYSTPQKLSEHVQQAHPGVRALSNAESEFYCEICIRSFKSRQAYSNHMRIHAKVPTTNRKPGEPKGFAPQIIGKPIKQLTMMQPGFVSFKPSYNVPNAPYCCDLCGKGFMHKKNIWKHKKVLHADILKDRNDSEENTMQASTEDEEFNNEENGTGLSTPQFNSFNFTNFTSNSQQSQSDGFAYSCELCYQRFPLRSSLWKHKRNKHGIISSFDGSEGQSQPSGDGSSRSSCTICKITFADKKSYYRHRKNVHKSSVQMCKLCGKPLNSTLELYEHLKSAHAQELLGYNANQGSSKSQEPPQEMEPEYDNDQEAVDPSVDYQARYPCDTCGKQFVGLLALQNHQCINQLPSQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTNKISKYEVVDPSQLARVTHSTPASVAKRRLPPEVEVTVVNPNKKLRSDDSIEMEQHSSGALEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLVHMKKHYEGGEGSSSTAMMDDDSYSCDLCNAQCDSAKALRAHRERHHGSESGDSDDDGAAPAQQPGEFTCAQCGDGVATPRDLIAHRTMHSTPTKFFCNICKVYFARAIDLSSHTRARHSDNEKVFFPCSMCDRSYMNKKSLQRHIEMAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00428349; iTF_01430120;
- 90% Identity
- iTF_01430120;
- 80% Identity
- -