Dpor009275.1
Basic Information
- Insect
- Deilephila porcellus
- Gene Symbol
- -
- Assembly
- GCA_905220455.1
- Location
- LR999983.1:634468-641648[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 6.3e-11 3.8e-08 33.3 0.0 4 39 175 211 172 215 0.89 2 4 6.9e-11 4.1e-08 33.2 0.3 2 39 227 264 226 267 0.92 3 4 8.3e-14 4.9e-11 42.5 0.1 2 45 282 326 281 326 0.96 4 4 5.6e-18 3.3e-15 55.9 0.0 1 42 333 375 333 378 0.95
Sequence Information
- Coding Sequence
- ATGCCGGGCGACGGTTTGTCCCGCGTCAAGAGCGAGCCACTGTCCGAGGAAGAAGACAGCAACTCATTTGTCCACAGCTATCTCTCTAATCAGGTTTCGTCAGAAGAGTTGAATGTAGTGAAATTCGAACCTGAATACCTGAGGAGGGACCACGTACCCACGCATCTCCTGCACCATCTACATGGCTCGGGGCTGGAGGAGCTGGCACCGCTGGCGCCGGCGGGCCCCGCGGCCACGCCGGTGTGCGTCAAGCAGGAGCCCACAGAGCCCGCGCCCGCCCTCACTCTTGAGACTTTGGAGCCCGCGCCGCAGTCGGCTGAGGGTGCTGCCCTCATAGACCGGCACTTAGCTTTACTGAACGCAAGTGATGTGCCTGACGAGTTCATGCCTCTAGCGTCTGTCAAAGATGAACCGCTTTCTGAAGGAGAACAGCAACAATTAAGCGGCGAGGACACCAGTGACTCATGCGGTACTCAGCCAGAGTCGTCCACACGTTGCAGCCCCAAGAGCTGGACCCAGAAGGACATGGACAACGCCCTGGAAGCGCTCAGGAAACACAACATGAGCCTTACCAAGGCATCAGCGACATACGGCATCCCATCAACAACACTATGGCAGCGCGCTCATAGACTAGGCATTGACACGCCGAAGAAGGAAGGTGCTTCTAAATCTTGGAGTGAGGCAGATCTTCGCGGCGCACTGCAGGCACTCAGAGCCGGGGCTATCTCTGCTAATAAAGCTAGCAAGGCTTATGGCATCCCCAGCAGCACGCTGTACAAGATCGCCCGGCGCGAGGGCATCCGGCTGGCGGCGCCGTTCAACGCCGCGCCCACGGCCTGGCGCCGCGCCGACCTGCAGCGCGCGCTCGCCTGCATCCGCGCCGGCGCCGCCACCGTGCAGCGAGCCGCCACTGCTTATGGCATTCCTACTGGCACCCTGTACGGCCGCTGCAAGAGAGAGGGGATCGAGTTGTCCCGCTCTAATCCTACGCCGTGGTCAGAGACCGCCATGGTGGAAGCGCTTGAAGCAGTCAGGGTGGGCCAGATGTCCATCAACCAGGCGGCGATACACTTCAACTTGCCTTACTCTTCGCTCTACGGCAGGTTTAAGAGATGCAAGTATCAAAATCAGCTGCAGGTCCCGCAACCACACCAACAAGATGCACAAAAACCTCAAGAAGTCGACCAAAATCAGCAAATGTACTACCAGCAGCTACCACCTGCCGCCCACCATCCATCAGAAGATACCATCCCGGTCTACCAATACGGGCACACATCCCACGATTACTCCGAAGCTATGTACTACAACAACTTTAGTAGTGTCGTCACCAGTTGA
- Protein Sequence
- MPGDGLSRVKSEPLSEEEDSNSFVHSYLSNQVSSEELNVVKFEPEYLRRDHVPTHLLHHLHGSGLEELAPLAPAGPAATPVCVKQEPTEPAPALTLETLEPAPQSAEGAALIDRHLALLNASDVPDEFMPLASVKDEPLSEGEQQQLSGEDTSDSCGTQPESSTRCSPKSWTQKDMDNALEALRKHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGASKSWSEADLRGALQALRAGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTAWRRADLQRALACIRAGAATVQRAATAYGIPTGTLYGRCKREGIELSRSNPTPWSETAMVEALEAVRVGQMSINQAAIHFNLPYSSLYGRFKRCKYQNQLQVPQPHQQDAQKPQEVDQNQQMYYQQLPPAAHHPSEDTIPVYQYGHTSHDYSEAMYYNNFSSVVTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00063500;
- 90% Identity
- iTF_00819977;
- 80% Identity
- -