Basic Information

Insect: Dasysyrphus tricinctus
Gene Symbol: -
Assembly: GCA_963921185.1
Location: OY992531.1:184485033-184496069[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 5e-05 0.014 17.9 2.1 1 23 406 428 406 428 0.96

2 18 1.3e-05 0.0036 19.7 0.4 1 23 434 456 434 456 0.97

3 18 2.5e-05 0.0069 18.8 0.5 1 23 462 484 462 484 0.98

4 18 2.1e-05 0.0058 19.1 3.1 1 23 490 512 490 512 0.97

5 18 4.8e-05 0.013 17.9 4.7 1 23 518 540 518 540 0.99

6 18 8.8e-05 0.024 17.1 5.7 1 23 546 568 546 568 0.97

7 18 2.4e-07 6.7e-05 25.2 4.3 1 23 574 596 574 596 0.98

8 18 1.5e-07 4.2e-05 25.8 2.4 1 23 602 624 602 624 0.97

9 18 0.00021 0.057 15.9 5.7 1 23 630 652 630 652 0.97

10 18 2.6e-05 0.0071 18.8 6.5 1 23 658 680 658 680 0.98

11 18 4.4e-06 0.0012 21.2 4.5 1 23 686 708 686 708 0.98

12 18 1e-05 0.0028 20.1 8.1 1 23 714 736 714 736 0.98

13 18 2.5e-06 0.00068 22.0 7.9 1 23 742 764 742 764 0.98

14 18 9.2e-07 0.00025 23.3 7.7 1 23 770 792 770 792 0.98

15 18 0.00029 0.079 15.5 9.5 1 23 798 821 798 821 0.95

16 18 0.00024 0.067 15.7 0.5 1 23 827 849 827 849 0.97

17 18 0.0011 0.3 13.7 4.4 1 23 859 881 859 881 0.98

18 18 9e-06 0.0025 20.2 1.7 1 23 887 910 887 910 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	5e-05	0.014	17.9	2.1	1	23	406	428	406	428	0.96
2	18	1.3e-05	0.0036	19.7	0.4	1	23	434	456	434	456	0.97
3	18	2.5e-05	0.0069	18.8	0.5	1	23	462	484	462	484	0.98
4	18	2.1e-05	0.0058	19.1	3.1	1	23	490	512	490	512	0.97
5	18	4.8e-05	0.013	17.9	4.7	1	23	518	540	518	540	0.99
6	18	8.8e-05	0.024	17.1	5.7	1	23	546	568	546	568	0.97
7	18	2.4e-07	6.7e-05	25.2	4.3	1	23	574	596	574	596	0.98
8	18	1.5e-07	4.2e-05	25.8	2.4	1	23	602	624	602	624	0.97
9	18	0.00021	0.057	15.9	5.7	1	23	630	652	630	652	0.97
10	18	2.6e-05	0.0071	18.8	6.5	1	23	658	680	658	680	0.98
11	18	4.4e-06	0.0012	21.2	4.5	1	23	686	708	686	708	0.98
12	18	1e-05	0.0028	20.1	8.1	1	23	714	736	714	736	0.98
13	18	2.5e-06	0.00068	22.0	7.9	1	23	742	764	742	764	0.98
14	18	9.2e-07	0.00025	23.3	7.7	1	23	770	792	770	792	0.98
15	18	0.00029	0.079	15.5	9.5	1	23	798	821	798	821	0.95
16	18	0.00024	0.067	15.7	0.5	1	23	827	849	827	849	0.97
17	18	0.0011	0.3	13.7	4.4	1	23	859	881	859	881	0.98
18	18	9e-06	0.0025	20.2	1.7	1	23	887	910	887	910	0.96

Sequence Information

Coding Sequence: ATGTTGTCTGTAAATATGATAAGTGATTCATTCCACATAGTTGGTGACAGTTTAACCAGATTTGTAAATGAATCTTTAAGAGAGGGTATTTTCCCTGATTGCTGGAAGGAGTCAATGGTGGTTCCTATCGCCAAATTCAATAAAGCTTTGTATCCTGAAGAATATCGTCCGCTTGGAAAATACTGGGTTGTTACGAATCTTTTTCAGGGTCCCGGCCAGCCGCCATACAATATTGGTGTAACACCAACAACTTCAGCAGTTCCTTCAATACCACCTCCGATATCATCGCATTCTAGCGCTTCGGCAGCCAAAGCAGCTAACTCtaagcagcaacagcagcagcaagaTCAACAACAGCAACTAGCATCAAACTCGCACACGCAATCGCCATCAGCACATATAGTTTCATCTGTTGGTGCCTCATCCCTTCAAATACCCAATCCAATGATTAATACGGGAATGAACCAGCACCAGCTTCCAAATGGTACAATTATCGCAGGTCCACGTCATCCGGATTCCTTACACGTTCATGgAACGATGTCCGGCGATGATAATCGACACGTCCCACATGGTATGCAGGACATTAAGGAGGAGAAACCTTTTGCTAATGGCAAGCCGAACTTACATATGGCACATGTCAATCCAGCATCTTCCATTTCATCAAAAATGAATTCTGGCAGTGGAGGAAACAATGGCCAATCAACTGAAACAGGTGGTAATCAAATGGTCAAACTACAGCCAGGTTCTGTCCCTGGTACCGGTAGTAGTGGAGGAGGTAACGAACAAGAAAGCAAACCACCCCACGGTGTTGAAATGTATAAAGTCAATATTGAAGACTTGAGTCAATTTTTATCATATCACGAAGTCTTTGGTAAGATCCATGGGGAAGTAATAAATCAACAGCAAATATCGCACACGGTAACTCATCCTACTACAAATGTATCAACTGCAAATGCTGGCGGAAACACGTCAGTGAGTGGTTCTGTTTCCGGTTCACTACCTCCACCACCGTCGACTAATGGAAACTCGATAGTGTCTACCAATAGCCTAACCAGTTCAGGAACTGGTGCCCAAGCTGTTCCACCAACAGGCGCAGCTGGTGTGTCTACTGCACCTGGTGAACTAATCCTACCTAAGATGGAAAATCAAGGGATGGGTGTTGATCAGAACACCCCACTGCTAGCACCGGACGGAACACCCATCATGGGCGGCACGCATATTTGTGACATTTGCGGCAAAATGTTCCAATTTCGTTATCAGCTAATTGTGCATCGTCGTTACCACAGTGAACGCAAGCCATTTAATTGTCAAGTTTGCGGACAGGGATTCACCACATCGCAAGATCTCACACGACATGGTAAGATTCACATTGGTGGACCAATGTTCACATGTGTGATTTGCTTCAATGTATTTGCCAATAATGCCAGCTTGGAGCGGCACATGAAACGCCATTCAACGGACAAACCTTTTGCGTGTACCATATGCCAGAAAACATTTGCCCGTAAAGAGCACTTGGACAACCACTTTCGCAGCCATACTGGTGAGACACCGTTCCGTTGCCAGTATTGTGCAAAAACGTTTACACGGAAAGAGCACATGGTGAATCATGTGCGCAAGCATACCGGAGAGACGCCACATCGTTGCGATATCTGTAAAAAATCTTTTACGAGGAAAGAACACTATGTTAATCATTACATGTGGCACACAGGTCAGACACCGCATCAGTGCGATATATGTGGCAAGAAATATACAAGGAAGGAACACTTAGCCAATCATATGCGATCACATACGAATGACACACCATTCCGGTGTGAGATTTGTGGCAAGAGTTTTAGCAGAAAAGAACATTTTACCAATCACATTTTATGGCATAcagGAGAAACCCCTCATCGCTGTGATTTTTGTGCGAAGACGTTCACCAGGAAGGAGCACCTATTGAACCATGTCCGCCAACATACGGGTGAGTCACCACATCGCTGCACCTATTGCTTGAAGACCTTCACTCGTAAGGAACACCTAGTGAATCACATTCGTCAACACACAGGCGAAACTCCCTTCAAGTGCACCTACTGTACCAAGGCTTTCACACGGAAGGACCATATGGTAAATCACATCCGTCAACACACTGGAGAATCACCACATAAATGCACCTACTGCACGAAAACCTTCACCCGAAAGGAACATCTGACCAACCATGTGCGCCAACATACGGGTGAGTCGCCACACCGTTGCACCTACTGCAAAAAAACGTTTACACGCAAGGAACATCTAACCAATCACATCCGGTTGCATACAGGCGATTCGCCCCACAAATGCGAATACTGCCAAAAGACGTTCACACGTAAAGAGCATCTGAACAATCATATGCGGCAGCATTCGAGTGATAATCCGCACTGCTGCAATGTGTGTAACAAGCCGTTTACACGCAAGGAACACCTGATCAATCATATGTCGCGATGTCATACCGGCGATCGACCATTTGCTTGTGAGACTTGTGGTAAAAGTTTCCCCCTTAAAGGCAATTTGCTCTTCCATCAACGCAGCCACACCAAAGGTCAGGAGTGTGAACGTCCATTTTCTTGCGAAAAATGCCCGAAAAATTTCATTTGCAAAGGTCATTTGGTGTCGCACATGCGATCCCATTCAGGAGAAAAGCCTCATGCTTGCACCATGTGCAGCAAAGCATTTGTGGAAAGAGGAAATCTCAAACGTCACATGAAGATGAATCATCCGGATGCTGTAATGCCACCACCTCCAACACCTTTACCCGGGCTTCTGACTCAAATCAAGCAAGAAATCAAGCCGATTATAATTCCCCATCAACCCCCAACTATGCATACGATACAACAAATCACTTCAACTGCAGGCAGCGCAAGTGCAAATAATCCTGGCAATCCCGCCCTTTTGGCACCTGGTCTGGTTCCAATGGTTACATCTACAATAACTTCACACATAAAGCAGCAATCCCACttacaacaacagcagcaacagcaccaacatcaacatcaactgcaacaacagcaacaacaactttTGCAGCTGTCCATTCAGCAAGTAGCTCAACATCAACAAGCTGAGCATcggcaacagcagcaacaacaacaacagcagcaacaacaacaacaacaacaacagcagcagcagcagcaacagcaacaacaacaacaagttcaacaacagcagcaacaacagcaacaagttcaacaacagcagcaacatcagcaacaaagccatcaacaacaccaacaaGCCCAACAACAATCGCAACAGCAATCACAACAGCATCAACAGCCCCAACCGCCTTCAGTGCCGTTAGCTCTCATTGGAGCCGACCCCTCAGCTATAGCTCGGGCTGCTATGCAACTACAACATTTGCCAACCAACGTTGAACAACACCCAGTGGTGTATTAG
Protein Sequence: MLSVNMISDSFHIVGDSLTRFVNESLREGIFPDCWKESMVVPIAKFNKALYPEEYRPLGKYWVVTNLFQGPGQPPYNIGVTPTTSAVPSIPPPISSHSSASAAKAANSKQQQQQQDQQQQLASNSHTQSPSAHIVSSVGASSLQIPNPMINTGMNQHQLPNGTIIAGPRHPDSLHVHGTMSGDDNRHVPHGMQDIKEEKPFANGKPNLHMAHVNPASSISSKMNSGSGGNNGQSTETGGNQMVKLQPGSVPGTGSSGGGNEQESKPPHGVEMYKVNIEDLSQFLSYHEVFGKIHGEVINQQQISHTVTHPTTNVSTANAGGNTSVSGSVSGSLPPPPSTNGNSIVSTNSLTSSGTGAQAVPPTGAAGVSTAPGELILPKMENQGMGVDQNTPLLAPDGTPIMGGTHICDICGKMFQFRYQLIVHRRYHSERKPFNCQVCGQGFTTSQDLTRHGKIHIGGPMFTCVICFNVFANNASLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDICGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCAKTFTRKEHLLNHVRQHTGESPHRCTYCLKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHIRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGESPHRCTYCKKTFTRKEHLTNHIRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFACETCGKSFPLKGNLLFHQRSHTKGQECERPFSCEKCPKNFICKGHLVSHMRSHSGEKPHACTMCSKAFVERGNLKRHMKMNHPDAVMPPPPTPLPGLLTQIKQEIKPIIIPHQPPTMHTIQQITSTAGSASANNPGNPALLAPGLVPMVTSTITSHIKQQSHLQQQQQQHQHQHQLQQQQQQLLQLSIQQVAQHQQAEHRQQQQQQQQQQQQQQQQQQQQQQQQQQQQVQQQQQQQQQVQQQQQHQQQSHQQHQQAQQQSQQQSQQHQQPQPPSVPLALIGADPSAIARAAMQLQHLPTNVEQHPVVY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00426545;
90% Identity: iTF_00976727;
80% Identity: -