Dtri059090.1
Basic Information
- Insect
- Dasysyrphus tricinctus
- Gene Symbol
- bab2
- Assembly
- GCA_963921185.1
- Location
- OY992532.1:258374903-258376535[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.1e-17 8.9e-14 53.0 0.0 2 43 49 91 48 93 0.95
Sequence Information
- Coding Sequence
- ATGAGTGGAGCTGGATCCTCATCAGTTGCTGACAGCTATCAATACCAATTACAATCCATGTGGCAAAAATGCTGGAACACCAACCAACAAAGCCTGGTACAACAGTTGCGTTTTCGTGAACGTGGACCTTTGAAATCTTGGCGACCCGAATCAATGGCCGAAGCGATTTTTAGTGTTTTAAAGGAAGGTCTGTCACTATCACAAGCTGCACGTAAATACGACATCCCCTATCCTACTTTTGTACTTTACGCCAATCGAGTTCATAATATGTTGGGACCCTCACTGGATGGTGGTACAGATCCTCGACCCAAAGCTCGAGGGCGTCCACAAAGAATTCTCTTGGGAATGTGGCCAGAAGAGTTGATTCGATCCGTCATAAAGGCAGTCGTATTTCGTGACTATCGTGAAATCAAGGAGGAAACTGTGCAGATGTATGCAAATGGTGGTGGAGGTGGTGCAGCTGCAACAGCTCATTCGTCTCCGTATGGAATGCAAGGAGCTCCTTCAAACGGTTCTTCATCCAACGGCTATCACAATAAACTGGGACTTCCTAGTGGATCACATCCATCGGATTCTGCTAGCCCTCTATCAACCATGGCGGAAACACTGCGTCGTCAGATCCAAATGTCACAACAATCTCCGTCACCGTCGCTCAATATGTACAAGTCACCAGCCTTCCTGCAAAGATCGGAAATGGAAGACCCGATGTCTAAGAGAAGTTCTTCCGAACATCATGCTAAGATGGCGGATAATTTACCCGACCTCAGTGCGTTAGGTCTCATGGGAATTCCTGGACTCAACGTCATTCCTCAAGGTCGTGGTCAGCATCAGCTGCCccatcaacagcaacaacaacatcaccAGCAAAATTCCTCCTATTCAAGTCGAGAACTGAAAGAGAGCATGCAGCACATGTCAAACGCAATGTCTCAAGCTGCCGCCGCTGCAGCAGCATCAAGGCCGCAGCTTCCCTATGGTCAACAACGAAGTGGCAGCTCTAACAGCAGCAGTAGTTCCCAACAGAAGCCCACAAGCAATTCACCCTTCTCCCATAATTACAAGTCAAAAGGTGACCCTTCGCCCTATAAGTTCCCCGATAAGCGAATGCTAGAGGGTCTCACACCTGGCATTGACTTCGAGGCCATTGCCAATGGTTTGCTCCAAAAATCGCACAAAGCCTCACCCCGTTTCGAAGACTTCTTTCCCGGCCCCGATGTGAGTGAACTGTTTGCGGCGAATTCAGCCTCTGAGGCAGGAGCAGGTTTCCCCATCAAAGATCATCCGATAGCGAAGATAAAGTTGGAACAACAGCATCACAGTTCCGACAACCATGAGGAATAA
- Protein Sequence
- MSGAGSSSVADSYQYQLQSMWQKCWNTNQQSLVQQLRFRERGPLKSWRPESMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSLDGGTDPRPKARGRPQRILLGMWPEELIRSVIKAVVFRDYREIKEETVQMYANGGGGGAAATAHSSPYGMQGAPSNGSSSNGYHNKLGLPSGSHPSDSASPLSTMAETLRRQIQMSQQSPSPSLNMYKSPAFLQRSEMEDPMSKRSSSEHHAKMADNLPDLSALGLMGIPGLNVIPQGRGQHQLPHQQQQQHHQQNSSYSSRELKESMQHMSNAMSQAAAAAAASRPQLPYGQQRSGSSNSSSSSQQKPTSNSPFSHNYKSKGDPSPYKFPDKRMLEGLTPGIDFEAIANGLLQKSHKASPRFEDFFPGPDVSELFAANSASEAGAGFPIKDHPIAKIKLEQQHHSSDNHEE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00314190;
- 90% Identity
- iTF_00664768;
- 80% Identity
- -