Dtri048296.1
Basic Information
- Insect
- Dasysyrphus tricinctus
- Gene Symbol
- -
- Assembly
- GCA_963921185.1
- Location
- OY992532.1:94234163-94235353[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.9e-13 4.2e-10 41.2 0.1 3 40 121 159 119 164 0.86 2 3 7.6 1.1e+04 -1.7 0.0 23 37 188 202 183 206 0.78 3 3 5.6e-10 8.3e-07 30.7 0.0 3 39 231 267 229 269 0.92
Sequence Information
- Coding Sequence
- ATGGCACCTCAACAATTAGATGAACCGCTTCTGCCAGTAGAGCAAATTTACTCAGAAAATAATCAGTACATTATATACGAATTAAAAAGTGATAGTCAACCTACATATAGCTACGTCGTCACCAATACAAAAGAACCACCGCCTGACTGTGCAAATCCCAAAGAAGGCAGCATTTCTGATAGCATCGTTTCCAGGGTAACCCAAGTAATAGCAAATCCGAAACCACAGTACACAATAAGTTATGAAataccaattgaaaataatcaAACAGCTCTTTGTAAGGAGAACAGCCCAAAAACAAAGCGTGCTTTAGCAAAAAAAGAGCGTTCTTTAGCAAAATCAAAGCGTACTTTACGCCGCCAAAAACTGGCAGAAGCTATTGTTGCTGTAGTCAATGAAGAAATGACTATTAATCAAGCTGCAAAAGCCTTTGAAGTATCGAAGACCAGCCTATGGAAAGAAGTCAACAAACACACCAAACACCGAAAAAAGACGGTTGACGAAGATCGCAATAAGAAGATTGTTGATCGTATTTGTGCAGGTGAATCTATCTCAGGCATTGCAAGATCCTTAAATGTTGCCAAATCCACAGTTCACTATCATAAAGTTCGATTAGCAGAAGCTGGAAAGCTTCCACCGAATGTAACTTTCAAACCCCCTATAGATAAAATGGAACAACTTGCTATCAAGGAACGTATAATTCGTGCTTTCCGTGGTGTGCGAGTAAATGGCATGTCGTTGCGTTTAGCATCAACATATTTCTCAGTACCACAGTCGACGCTATGGAAACACATACAACGGTTTAAAGCTTTCCAAAAGAAACAAGGAAAAGTTGTAAAAAGGTGCAATATTTCTAAAAAGCCTTCAAATGATGAACTCAGTGAAACTAGTTTAGAAGAAACTAGTGAAGAGGAAGATAGTATAGAAGaagaagatgatgatgatgatgatgaagatgaagGCAGTTCACATGAAGCTGAAAGCGAAGATTCTACTGAAGCTGGTGAAAATACTTCTGATGTACTTTCTAATTACACAACAGATGGTGATTATAGAGATGACTTTGATTTACTGGACGCTTATTGTGAGAAATACGAAGCTGGTGCAAGTGAAGAAGGAGactttttaataagttttgacTTTGAGACTTTTGAGGAGTATGTAAAGACAGAGACAAATCTCGAGAACTGA
- Protein Sequence
- MAPQQLDEPLLPVEQIYSENNQYIIYELKSDSQPTYSYVVTNTKEPPPDCANPKEGSISDSIVSRVTQVIANPKPQYTISYEIPIENNQTALCKENSPKTKRALAKKERSLAKSKRTLRRQKLAEAIVAVVNEEMTINQAAKAFEVSKTSLWKEVNKHTKHRKKTVDEDRNKKIVDRICAGESISGIARSLNVAKSTVHYHKVRLAEAGKLPPNVTFKPPIDKMEQLAIKERIIRAFRGVRVNGMSLRLASTYFSVPQSTLWKHIQRFKAFQKKQGKVVKRCNISKKPSNDELSETSLEETSEEEDSIEEEDDDDDDEDEGSSHEAESEDSTEAGENTSDVLSNYTTDGDYRDDFDLLDAYCEKYEAGASEEGDFLISFDFETFEEYVKTETNLEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00426261;
- 90% Identity
- -
- 80% Identity
- -