Dalb008457.1
Basic Information
- Insect
- Dasysyrphus albostriatus
- Gene Symbol
- -
- Assembly
- GCA_946251825.1
- Location
- CAMIUB010000078.1:1942251-1943519[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.8e-11 3e-08 34.2 0.1 3 44 159 201 157 202 0.91 2 3 0.35 5.9e+02 1.3 0.0 18 37 221 240 214 246 0.88 3 3 6.9e-11 1.2e-07 32.4 0.0 3 39 269 305 267 307 0.92
Sequence Information
- Coding Sequence
- ATGTCTCTCTCTTTCTCTCTTCCTCTCCATGGCGATAAATTATCCTATTATTTTAACTACAAATTCCAGGAAGAAACGAATATCATCGATGTTTCTGTATCAGAAGAAGATTCCATGGCACCGCAACAATTAGATGAACCGCTTCTGCCAGTAGAGCAAATTTACTCAAGAAATGACCAGTACATTATATACGAATTAAAAAGCGATAATCAACCTTCGTATAGCTACGTCGTCACCAATCCTAAAGAACCACCGCCTAACTGCGCAAATCGGAAAGAAGGCAGCATTTCTGATAGCATTGTTTCCAGGGTTACCCAAGTAATAGCAAATCCGGAACCACAATACACAATCAGCTATGAAATACCAATTGCAAATGATCAAATACATATTTGTAAGGAGAACAGCCCAAAAACAAAGCGTGCTCTAGCAAGAAAAGCGCGCTCTTTAGCAAAAACAAAGCGTACTTTACGCCGCCAAAGACTGGCAGAAGCTATTGTTGCTGTAGTCAATGAAGAAATGACCATTAGTCAAGCTGCAAAAACTTTTGAAGTTACCAAAAGTAATCTATGGAAAGAAGTCAACAAACACACCAACCACCGAAAAAAAATTGTTGACGAAGATCGCAATAAGAAGATTGTTGATCGCATTTGTGCAGGTGAATCTCTCTCCAAAATTGCAAGATCCTTAAATGTTGCCAAATCCACAGTTCACCAACATAAAGTTCGACTAGCAGAAGCTGGAAAGCTTCCACCGAATGTAACGTTCAAACCACCTATAGATAAAATGAAACAACTTGCTATCAAAGAACGTATAATTCGGGCTTTCCGTGGTGTTCGAGTAAATGGCATGTCATTGCGTTTAGCATCAACATATTTCTCAGTACCACGATCGACGCTATGGAAACACATACAACGGTTTAAAGCTTTCCAAAAGAAACAAGGACAAAGTGTACAAATTTGCAATGTTCCTAAAAAGCCTACAAATGATGACTTCAGTGAAAATAGTTTAGAAGAAACTAGTGAAGAGGAGGATAGTACAGAAGAAGAAGAAGATGAAGCTGACAGCGAAGATGCTACCGAAGCAGGTGAAAATACTTCTGATGTACAATCTAACACAACTGATAGTGGTCATCAAGATGACTTTGATTTACTGGATACTTATTGTGAGCAATACGAAGTTGGTGCAAGTGAAGAAGGAGACTTTTTTATAAGTTTTGACTTTGAGACTTTTGAGGAGTATGTAAAGACAGAGACAGATTTCGAGAACTGA
- Protein Sequence
- MSLSFSLPLHGDKLSYYFNYKFQEETNIIDVSVSEEDSMAPQQLDEPLLPVEQIYSRNDQYIIYELKSDNQPSYSYVVTNPKEPPPNCANRKEGSISDSIVSRVTQVIANPEPQYTISYEIPIANDQIHICKENSPKTKRALARKARSLAKTKRTLRRQRLAEAIVAVVNEEMTISQAAKTFEVTKSNLWKEVNKHTNHRKKIVDEDRNKKIVDRICAGESLSKIARSLNVAKSTVHQHKVRLAEAGKLPPNVTFKPPIDKMKQLAIKERIIRAFRGVRVNGMSLRLASTYFSVPRSTLWKHIQRFKAFQKKQGQSVQICNVPKKPTNDDFSENSLEETSEEEDSTEEEEDEADSEDATEAGENTSDVQSNTTDSGHQDDFDLLDTYCEQYEVGASEEGDFFISFDFETFEEYVKTETDFEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00427044;
- 90% Identity
- -
- 80% Identity
- -