Basic Information

Gene Symbol
JARID2
Assembly
GCA_963921185.1
Location
OY992532.1:185652176-185678706[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.5e-21 1.1e-17 66.2 0.0 6 89 1816 1897 1812 1897 0.92

Sequence Information

Coding Sequence
ATGATGCCCACCTATGAAAAAGTTTTGGAGAAAGTAGTATGCATTCAATTGGAAAGTTACCTCACTGAAAATGGTATACTCTGCGAGGAGCAATCTGGGTTTCGTAAAGGTCACTCGACAGAAACAGCTTTGGCATGGGTTCTTAATGAATGGAAAAGAGATCTGGATTCGGGAAATACGGTGCTGTCTTTATTCCTTGATTTAAAGAGAGCATTTGAGACAGCTGATAGAAGGATTCTTTTAAAGAAATTATTCAAATATGGAATTCGGCAGATTGAACTGAAATGGTTTGAATCTTTTCTGTCTTCAAGGACGCAAAAAGTAAAGTTGGGTGAAGATTATTCCTCATCGAAAAATGTTGAATTGGGAGTTCCTCAAGGAACCATACTTGGAGTTATCCTCTTCCTATTATATGTGAATGATATTAAGGACTGTTTAAAGACGAAAGTGCAAGCACAAAGGAAATTTGCACAAGGACAGAGTGCACCAGCATCATCATACAGTGCTGCATTGGCATCATCTTCAACTGCCGCAGCTGGTGTCAGTACATCATTGGGCAATTCTGCGACTCAAGAAAATCGTGAACCACCAACAGAAATTTTGCCCAACAAAAGGCCAAAAACTGAAGACTTTTTAACATTCCTTTGCTTTCGTGGAACATCGGCACTGCCTGCacatttagattttttaaatcaaaatacatCACAGGCTCCAAAAGATGAATCTCAAgatacaaatgaaaaatcaaacgaAGATACAGAATCGTCACCAACGACGAAAACAAATGTGCAAAAATCTACAAGATCATCGTCTACCAAAAAGAAGGACAAATGTGCAACCGTTGATGAAAGCTCCACATCGACCCTAAGCgttaaaaaaactgaaaccaaAAAATCAATAGCAAAGAAAAATGAGGAAGCAAAAGATGAAAAAGTAATGGCATTTGCGGTTAGAAAAAGGGCAGAACAATTACCCGAGGGTAATCGTCGCGGCAGACCTCCAAAGGAAAAACTTAACAAATCCAATGACGGTAATAGGCGCTCCGTCAGAAATAAAGATAACATAAAATCTTTTGCAGAGCTAGACGACAATGAATCTGAAACAAATGACATAGAAACAGGATCTGCAGACTGTGGTGGACAAGATTTAATTAAATCTGACAAAACCCCACAGCAAAAAGGCAAACGAGGAAAACCCTCAAACTCAGCTAAGAAAAAGCAAGAGACAAGTGGAGCGGTTTCTACACGTGAAGTTCAAGGCCCACCGATTGAAAAACAAGGTCCTGAAGAACCCGTTCCTCAAACAAAACCAACACAGGCCAAAGAAAAACCCGTAATAAAAAGACCTCGCCAGAAAGAAGCTCCCATATTTGTTCCGTCACCTGAACCAACAGGTGGAGGGAGAATGACACGACAACGGGCATTTTTCGAACCAGTTAAGGTAATTCGtcatgaagaaaaagaagaaaaagtagaaaaggaagaaaaagaagaaaaaaaagaaaaagaagaaaaggaagaaaaagagaaaaaagaagaaaaagaggaaaaagaacaaaaagaagaaaaagaagtggaaaagaaaaaagagcccgaggaaattaaaaacaaagaacCTTTACCACCTCCAGAACCCGTGTCTGATAAACAAGAAGAAGAGAGTTTTCCAAATAGAGATGTCTTTGACTTTTCTTCAGAGGATGAACAACCACTGGCAAAAgctatcaaacttaaaaattcaaaagaagtTCCAGCTAAAAAGTCATCaccaaaaaaacaacaaaaacaacctGCCCAAGGTACAGATGTTTCACAAAGTAAAGATGACATTTCGCCAAAAACGAAGCCAGTCGaaatcgaaaaagaaaaaataataattgaaaagccagacaaaattgaagaaataaataatataacgcCTGAACCACAAGAAGACGGGAAGGTTTTACATGAGAAGATTAAAAAGACACCTGGTAGAAAGCCCAAAAAAAAGATAACTGAAGAACAAAGTGTAGTATCcgaaaaaagttcaaaacacTCTAATGAACAACCCAGCCAACAAAAGCAGGATACTGAAAATGATTTAAAGTTATTgcaaacaacaacagcagcagtaGCAGTCACTAGGCAAAAGAAAAAGTCAACAGCCGAAGTTCCTGAGATCACAGAACCTGAACCTCGAAGCACTCGACCGACGAGGAAGACTAAAGAAGCTGCAACTATTTATATGGGCATTATTGGACAAAAATTGCAATTAGATGAGTTCGACGATGACGAATTGTCATTAAGTAGTTTTCCAGATCTGCCAAACGTTAAAGAAATGGAAAAAATGGAAACAGAACTAAAAAAGAACGTCGATCAAAACAAACAATTACAAAAGCAGGCCACCGATACAGCTGAAAAGTCTGAACAGAAACCAACAtcaccaataaaaaaagaaattgaaaagcCTCCAGCTAAGAGGGGTCGTCCGCCAAAAAGCTCCTCTTCGAAAGCTGCTGCCAAACAAAAACCTACAAAGCCTCCTCAAATAGAAGGAATGCTTCGTAAAAGGGAAGAACCCAAACCACAGGAAATTAAAGATAATGAAAAAGAAGACGATGAAGATTTCTTGCTCAATGAAGAGGTCAACGAGACTAAGAGAAAACTCGAAAAAAGCTTTAGCGATTCGGACGACGAACCACTGGCTATCAAATTAACAAAAGGTTCCgatgattattcaaaaaaatctgaTAATCCGCCAATAGTGAGGATGCCAACTATGACGCCATGTGAAGAACGGGCTAAAGAACCACGACCAGCTCCAAAAATGTTAAATCTTCTGCCAATAACAACTCCAGCACCTACGTTACAATGCAATGTACCAACATCGACTCATGTGAATTCCACTGCACTCAAGTTAGATGATAAACCAAAAATGCCCACTCCTTTGCCGGCTCCTGCATTTATTCCCCGACACCCCACTCTTAAAACTCCTCCAGCTCAAACTACCATTCCTCCTCTTCAACCAACAATAAAATACCAAACTCCGCCAACAACATATCCACCCCCGATCGAAGCATATCCGTCTCCAAAAATCAATCCAAACTTTCTCACCCCAAAGTTCGACCGGAATATAGATCGACGCATAGTTTGTCTGGATGGCTCCTCTTCGCTGTCAACCATGCAAAGACCAAGTAGCAGTTTTCCATCACCGTCTCCAGTGAAATTTGATATGTCGACTCCAAAAACGCCTAGTACTTCGAATGCAAAAATTCCTATGGTGCCATCAACAACATCATCGAATGCACAGCCGTCATCAGATCCTCTAAAGGACGAAATCGGAAGCATTCTTGCTGCAAACCTGATGCCAAGCAAAGAAGAATCAGGTAAAATATTTGGTATTGCCAGTGTCAGTTTGGCGCAAAGTTCTGGGCCAGACAACACAAAGTGTACCTTGGGTAAGTGTGGCTCAATTCATAAGCCCGTACTTGGCCCAGTTGTTCCAACTGAATCCTATCTAGGCGAACAGCTTTCTAGCAAAGAAAGGCGAAAAGCCAAGGTAAACATGACACatgaacaaattcaaaaatggttGATAGAATGTTCTTCAAATCCGGATGAGATTCAAGATGACTTGGACGATGATTTTGATGACAATCTTCGTCCAAACATATATGCAACTACGCCTCCACCAACAAGGGATGACAAAGAGAGCACTTCATTTAGTTCCTCTTCGAAAACCACCAGAGATTTGGGAAAAAGTGAAAGCGCCTGGTCAGGTAAAGGCCCTTCCTTAAAAGCTACGCCTGTTGTATTACCCAAAGATGATCAAAGACCAGAAGAATGTTCTTTCTCATCAGATGCAGGAAACAAAGACCTCAAAGACGGTCCCAAGGACTACCAGACGCAAAAGACTACAGCTATGAATAAGAAAAATGATACAGTCACCAAATCCaaggagaaaataaaaattgacaaaactaaaCCGGAGAAAGAAGTAAAGAAAGTTCAGGATAAAGTGTCCAAGGAAGGAACTGGTCCTCAAAAGGGTGTCAAACCGAACTCGGCAACTACAACTACTGCAGCTACAACATCTTCACCGCGACAGCTAAAAAAAGCAGATGAAAGTAAAAAGGCCCCAACAATTAATTCGCCCACGAGTAGAGCCGGTACGGCTGCCACATCAAATGCAGCTAAAACTCCAAAACGCACCACAGTTTACAACTCCAAGCTGAAGGAGTCCACAACAACCAGTCATAAGAAGAAAACTCCATTTTCTTACACTTTCGGTGCATTTTCGGCAGATAACGAAAAAAGTATTTATTCCTTTGACAAAGAGGAAGACGACGACACAAAACTTCCTTTATCCAAACCATTCCGGAGGCAAAGTCGTCGCGAATCGCATACCGAGGATTCCAATCAACTTGATCAAACCGCGTTGCACAAAAACACAGCCACCGTTGAGAAAAAACACGAAAATAAATCACAAGTGAATGTTCCTGTAGCAGTGGCTACGGAGAAAAACAAGTCCGTAAAGGGAAGCCCAgaaaaaaccaaacaaatcaCCGAGTCTCCCGACAAACCGGGTGACACTAATTTGGGAGATTCCGATTCAGATGTTCATACGTTTTACATACCCCTTCAAGGAGCAGCAGTTGGAGGAAGTGGTGAAGGCAAGTCAGATTTGATCCAAGGTGTGGCAGTAAAACTAGGCCGAGAAGGTCCCGAAGGACCCAACCAGAAAGTTGTGATGCATGCGACTTTAGTCACGAAATCTCAGATGGGATCCAATTCAAAACCGCTTCCGGATTCAATGAATGTTTCAGAAATAGTGAAAAACCTTCTTAGTTCAACCTCtttgcaaacaaataacaaggACGCCGGTATCGTAGCGCCTATAACTCCGCCTTCTATATTTGTCCCTGCAACAAGTAGTTCTGCCTCTGTTGCTGCTGCACCACAACAAAACGTGGCAGCAAATACAACAGCTGGAACTTCAGTGGGTAGCTCGAAAAGTGTGCCTGTCGGAACGGTTCAGCCTAGATTTAAGTCAAACGAATCGGGTGCAGCTCAACCGAATAATGCATCCGGCTCTGGTGCTTTAACACGCGTCAATTCGAACTCATCACTTTTCTCCGGTTCTAATAAATCACGTGGCCAATCGAGCAAAAAGATCAAAGACGACACCCCAATAAAAATGTGCAATAATACAGCTTTTCCTCGTCATGATGATCCAACGCAAATGGTTGAAGCACCAATATTCCGTCCAACGGAAAAGGAATTTTTAGATCCCATGGAGTTCATCGATAGGATCACTCCGATAGCGGCTCGATTTGGCATCTGCAAAATCATACCACCTGCTAGCTTCAAGCCGGAGTGCAGAGTGTCGGACGACATGCGATTCACAGCGTATAATCAGTATGTCCACAAAATGCTTCACAGATGGGGTCCAAGTACGAAGGAGCTGAGTGCAATTAAGAAATATCTAGCCACACAAAGTGTTGTGATGAATCACCCGCCATGGATTGGAGGAATGGAAGTTGATCTACCAAGACTTTATCACACCGTTCAAGAGTTGGGAGGCCTCAAAGAGGTTATCGAAAAGAAAAAGTGGACTCGAGTGGCTGAGGAAATGTGCATTCCTAAGCTAGCGCAGGATCGCGTAACAAAGCTCGATGATATATATTGCAGGTATCTCCTACCGTACGATACATTGTCACCAAGCGAACGTCAAAAGCTCTTTGATGAAGTAGAAGCTGACTGGGCGAAGCGCGAGGCAAGAGCAAGGCGAAACGCTGATCGATTTGTTAACACTGAAAGCGTTAGCAACGAGGACGATGAAGTATCGAGCGAAGACGACGAAGAGTCTGAAGAAGAAGTAGACGGCGTATCCATGGAGTGCATAGTGAAGGGTCGAAGTATGCCCCTCAGTCAATTTTTCCGAATAGCTCGCAACACAATGTCTTTGTGGTTTAAGAACTCAGAGCCTTCTGTGACTGAAGTAGAAGCAGAATTCTGGCGCCATGTTGCAGTGCGAGACAGTCACGTGTGTGTCCATTCCGGATCGATTGATTCCAGTGGCTGGGGATACGGTTTTCCTTCTCCTGGACCAAAAGGTAAAGGATCTGTGTGTGCTCGTCATCCATGGAATCTTAAAGTCTTAACGAACAACGCTGGATCAGTTCTGCGCTCATTAGGTCCGGTGATGGGAGTTACTGTTCCAACACTTCACGTTGGCATGTTATTTAGTGCGTGCTGTTGGTATCGAGATCCACATGGACTATCATGGATTGAGTATTTGCACACAGGTGCGAGTAAATTGTGGTACGGGATTCCTGATGATCAAAGTGCAAACTTCCGATCGGCCCTTACATCACTCATCCCAACTCacattcaaaacaaaacaatttggcTACCCTGCGACACGGTCATGGTGCCGCCGCATATGTTAACTGATCGCGGGGTCTCTTTGTGCCGTATAGAACAAAAACCAGGGGAGTACGTTGTGATTTTTCCGAGGGCGTACACTTCAAGTGTCTCAACTGGCTATGTTGTGTCGGAAAGTGTGTATTTTGCTACTAGTTCTTGGCTGGAATTgggaaaagatgattttagagatattcatGATAGCTGTGAGCCAGCAATGTTTTCTTTGGAACAATTATTGTTTGCTCTAGCATCTGACCAGCGAGTAACAGCTGATGTACTTTCTCAAATGTTGCCTATGATTAACGAAGTATTCGAAAAAGAAGTTGCCGCTAGAGAACAGTTAAAGGCTGCAGGTGTTACATCAACAGAAAAAATTCCAGCAGAAAAAACTACTAAATCTAGAAAACAGCCGATAGCATCTATTCAACATGAATGCGACTTATGTCGAGCAAACCTGTATATATCCATGGTGAAAACCGATGAAGGAAACATCTACTGTTTACAACATGCCCTTAAAAATCTTAACAAAGGAAACATTCAAGCCAAACAATGCAAACTCATATTTAGCTACAACATAGAAGATATTGAGAATCTTATCAAAACCTTAAAGGATCGACTTGTACAAAAGCGAACCGCTGCTAATAAGAAATCTAAGTAG
Protein Sequence
MMPTYEKVLEKVVCIQLESYLTENGILCEEQSGFRKGHSTETALAWVLNEWKRDLDSGNTVLSLFLDLKRAFETADRRILLKKLFKYGIRQIELKWFESFLSSRTQKVKLGEDYSSSKNVELGVPQGTILGVILFLLYVNDIKDCLKTKVQAQRKFAQGQSAPASSYSAALASSSTAAAGVSTSLGNSATQENREPPTEILPNKRPKTEDFLTFLCFRGTSALPAHLDFLNQNTSQAPKDESQDTNEKSNEDTESSPTTKTNVQKSTRSSSTKKKDKCATVDESSTSTLSVKKTETKKSIAKKNEEAKDEKVMAFAVRKRAEQLPEGNRRGRPPKEKLNKSNDGNRRSVRNKDNIKSFAELDDNESETNDIETGSADCGGQDLIKSDKTPQQKGKRGKPSNSAKKKQETSGAVSTREVQGPPIEKQGPEEPVPQTKPTQAKEKPVIKRPRQKEAPIFVPSPEPTGGGRMTRQRAFFEPVKVIRHEEKEEKVEKEEKEEKKEKEEKEEKEKKEEKEEKEQKEEKEVEKKKEPEEIKNKEPLPPPEPVSDKQEEESFPNRDVFDFSSEDEQPLAKAIKLKNSKEVPAKKSSPKKQQKQPAQGTDVSQSKDDISPKTKPVEIEKEKIIIEKPDKIEEINNITPEPQEDGKVLHEKIKKTPGRKPKKKITEEQSVVSEKSSKHSNEQPSQQKQDTENDLKLLQTTTAAVAVTRQKKKSTAEVPEITEPEPRSTRPTRKTKEAATIYMGIIGQKLQLDEFDDDELSLSSFPDLPNVKEMEKMETELKKNVDQNKQLQKQATDTAEKSEQKPTSPIKKEIEKPPAKRGRPPKSSSSKAAAKQKPTKPPQIEGMLRKREEPKPQEIKDNEKEDDEDFLLNEEVNETKRKLEKSFSDSDDEPLAIKLTKGSDDYSKKSDNPPIVRMPTMTPCEERAKEPRPAPKMLNLLPITTPAPTLQCNVPTSTHVNSTALKLDDKPKMPTPLPAPAFIPRHPTLKTPPAQTTIPPLQPTIKYQTPPTTYPPPIEAYPSPKINPNFLTPKFDRNIDRRIVCLDGSSSLSTMQRPSSSFPSPSPVKFDMSTPKTPSTSNAKIPMVPSTTSSNAQPSSDPLKDEIGSILAANLMPSKEESGKIFGIASVSLAQSSGPDNTKCTLGKCGSIHKPVLGPVVPTESYLGEQLSSKERRKAKVNMTHEQIQKWLIECSSNPDEIQDDLDDDFDDNLRPNIYATTPPPTRDDKESTSFSSSSKTTRDLGKSESAWSGKGPSLKATPVVLPKDDQRPEECSFSSDAGNKDLKDGPKDYQTQKTTAMNKKNDTVTKSKEKIKIDKTKPEKEVKKVQDKVSKEGTGPQKGVKPNSATTTTAATTSSPRQLKKADESKKAPTINSPTSRAGTAATSNAAKTPKRTTVYNSKLKESTTTSHKKKTPFSYTFGAFSADNEKSIYSFDKEEDDDTKLPLSKPFRRQSRRESHTEDSNQLDQTALHKNTATVEKKHENKSQVNVPVAVATEKNKSVKGSPEKTKQITESPDKPGDTNLGDSDSDVHTFYIPLQGAAVGGSGEGKSDLIQGVAVKLGREGPEGPNQKVVMHATLVTKSQMGSNSKPLPDSMNVSEIVKNLLSSTSLQTNNKDAGIVAPITPPSIFVPATSSSASVAAAPQQNVAANTTAGTSVGSSKSVPVGTVQPRFKSNESGAAQPNNASGSGALTRVNSNSSLFSGSNKSRGQSSKKIKDDTPIKMCNNTAFPRHDDPTQMVEAPIFRPTEKEFLDPMEFIDRITPIAARFGICKIIPPASFKPECRVSDDMRFTAYNQYVHKMLHRWGPSTKELSAIKKYLATQSVVMNHPPWIGGMEVDLPRLYHTVQELGGLKEVIEKKKWTRVAEEMCIPKLAQDRVTKLDDIYCRYLLPYDTLSPSERQKLFDEVEADWAKREARARRNADRFVNTESVSNEDDEVSSEDDEESEEEVDGVSMECIVKGRSMPLSQFFRIARNTMSLWFKNSEPSVTEVEAEFWRHVAVRDSHVCVHSGSIDSSGWGYGFPSPGPKGKGSVCARHPWNLKVLTNNAGSVLRSLGPVMGVTVPTLHVGMLFSACCWYRDPHGLSWIEYLHTGASKLWYGIPDDQSANFRSALTSLIPTHIQNKTIWLPCDTVMVPPHMLTDRGVSLCRIEQKPGEYVVIFPRAYTSSVSTGYVVSESVYFATSSWLELGKDDFRDIHDSCEPAMFSLEQLLFALASDQRVTADVLSQMLPMINEVFEKEVAAREQLKAAGVTSTEKIPAEKTTKSRKQPIASIQHECDLCRANLYISMVKTDEGNIYCLQHALKNLNKGNIQAKQCKLIFSYNIEDIENLIKTLKDRLVQKRTAANKKSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00664642;
90% Identity
-
80% Identity
-