Dalb024394.2
Basic Information
- Insect
- Dasysyrphus albostriatus
- Gene Symbol
- -
- Assembly
- GCA_946251825.1
- Location
- CAMIUB010000348.1:822056-822520[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.7e-09 1.6e-05 25.5 0.0 3 37 15 49 13 55 0.91 2 2 5 8.4e+03 -2.4 0.1 15 23 143 150 142 151 0.79
Sequence Information
- Coding Sequence
- ATGGCTAAACAAAGTCCAAAACCACGGAAAACCTGGCGGAAGGAGGACATGATGGAAGCCATATCCGCAATGAACAACAAATTAATGGGATCTTTGAAGGCGTCCAAAACATATAATGTTCCGAGAACCACACTGAGGCGATTGGTGGCAAAGAAAGAAGTACCATTGGAAGAAGTGGTAAGTGCCAAATTAGGAAGAAAGACTATATTTCCACCAGAATTAGAAGAGTCCTTAGTGGACTATTGTTTAGAAATGGAAAAAAAACTATTTGGCCTAACAAGAAACGACATACGGTCGATAGCTTTCCAGCTTGCTGTTAAAAACGGGATTCCAAATCTATTTTCTACTGTGAAAGAAGTTGCAGGCAGGGACTGGCTTCGTTTGTTCCTTCGAAGACATCCATCTTTGTCGTTCCGCCAGCCGACTGGAACATCCTTAGCGCGAGCTTCCGGATTCTCGAAGTAA
- Protein Sequence
- MAKQSPKPRKTWRKEDMMEAISAMNNKLMGSLKASKTYNVPRTTLRRLVAKKEVPLEEVVSAKLGRKTIFPPELEESLVDYCLEMEKKLFGLTRNDIRSIAFQLAVKNGIPNLFSTVKEVAGRDWLRLFLRRHPSLSFRQPTGTSLARASGFSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01253705; iTF_00310963;
- 90% Identity
- -
- 80% Identity
- -