Cgro004104.1
Basic Information
- Insect
- Cheilosia grossa
- Gene Symbol
- -
- Assembly
- GCA_963082955.1
- Location
- OY720144.1:51879327-51879722[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-09 5.9e-07 29.5 0.1 2 37 14 49 13 57 0.90 2 2 5.2 2.7e+03 -1.5 0.0 7 16 54 63 52 65 0.77
Sequence Information
- Coding Sequence
- ATGTCTAAACAAAGTCCGAAACCACGGAAGACTTGGCGGAAGGAGGACATGATGGAAGCCATATCGGcaatcaacaacaaaattatggGATCTTTGAAGGCATCCAAAACATATAATGTTCCGAGAACCACACTAAGGCGATTGGTTGCAAAAGAAGAAGCAGCATTGGAAGAAGTGGTAAGTGCCAAATTAGGAAGAAAGACTATATTTCCACTAGAATTAGAAGAGTCTCCATTTGGCCTAACAAGAAACGACATAAGGTCGTTAGCTTTCCAGCTTGCCATTCAAAACGGGATTGCAAGTCCATTTTCTATTGTCAAGGAAGTTGCAGGCAGGGACTGGCTTCGTTTGTCCCTTAGACGACATCCATCGTTATCGTTCCGTCAGCCGACTTGA
- Protein Sequence
- MSKQSPKPRKTWRKEDMMEAISAINNKIMGSLKASKTYNVPRTTLRRLVAKEEAALEEVVSAKLGRKTIFPLELEESPFGLTRNDIRSLAFQLAIQNGIASPFSIVKEVAGRDWLRLSLRRHPSLSFRQPT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00426274;
- 90% Identity
- -
- 80% Identity
- -