Dalb034306.1
Basic Information
- Insect
- Dasysyrphus albostriatus
- Gene Symbol
- lov
- Assembly
- GCA_946251825.1
- Location
- CAMIUB010001012.1:102450-103085[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.9e-11 1.5e-07 32.0 0.1 17 44 1 28 1 29 0.95
Sequence Information
- Coding Sequence
- ATGACCACGAGCCAAGCATCAAGGATATTTGGCATACCATACAATTCCCTGCTGATGTATGTCCGTGGGAAATATGGCAAGAGTCTTAAATTGGAGCAACTGCGAAAGGACTGCATAAGTGGGCCTCCAGTTGAACTTTTAACAATGGGACTGAATAATAATAATGGTGGAAGTGGAGGTGGAGGGGGAGGAAGTGCAGGAGGTGGTTCCAGTGGTGGCAATAATGGAAGCAAAAATCAGGATTCAAATCGAAGCAAAGACTCCCGAGACCTAGACTGCGGTGGGGGAGGAGGCAACGGACCACCAGGTGGTCCAATGGGTCCGCGGAGTTCAAGCTCCGAACCGGATCTCCTAGCAGGTCCCAATTCAATATTCAATCCCTTCCAACAAGGTTTCTACCCCGACTTTCCGGGTGGCTTTCCTGGCCTGCCACTTGGGATGTTAAACCTCCTCCCGCCCGAAAGACATCAACAATCAGCAGCAGCTGCGGCCGCTGCAGCTGCCATGCATATGGCAATCGATGAAGACTGCAAATCCGATCGATCTAAGCAATCAATGGATGATGAATTCTCACAGCCATTGGCTTTGAATCGTGACGAACGGCGAGAGCTGACGCAACAAAATGGGCAGGATTGA
- Protein Sequence
- MTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCISGPPVELLTMGLNNNNGGSGGGGGGSAGGGSSGGNNGSKNQDSNRSKDSRDLDCGGGGGNGPPGGPMGPRSSSSEPDLLAGPNSIFNPFQQGFYPDFPGGFPGLPLGMLNLLPPERHQQSAAAAAAAAAMHMAIDEDCKSDRSKQSMDDEFSQPLALNRDERRELTQQNGQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00241407;
- 90% Identity
- iTF_01318154;
- 80% Identity
- -