Blap008252.1
Basic Information
- Insect
- Brachypalpus laphriformis
- Gene Symbol
- lov
- Assembly
- GCA_945910015.1
- Location
- CAMDTZ010000232.1:320127-320750[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.5e-10 2.8e-07 32.1 0.1 17 44 1 28 1 29 0.95
Sequence Information
- Coding Sequence
- ATGACAACAAGTCAGGCATCACGAATATTCGGCATCCCCTACAACTCCCTGCTGATGTACGTCCGTGGGAAATATGGTAAAAGCCTCAAGTTGGAACAGCTCCGAAAGGACTGTATAAGTGGTCCACCAGTAGAGCTCCTCACCATGGGTTTAAGTAACAACAACGGTGCAGGTGGAGGAAATGGCGGTGGTGGAGGTTCCGGTAACAACAACAGCAATAAAAACCTCGACTCAAATCGTAGCAAAGACTCGCGCGACTTGGATTGCGGTGGAAATGGCGGCAACGGGCAACCTGGTGGTCCTATGGGTCCACGAAGTTCCAGCTCCGAACCGGATCTTCTATCAGGGCCCAACTCAATATTTAATCCATTCCAACAGGGATTCTACCCCGACTTTCCTGGTGGTTTCCCTGGCCTACCCCTCGGTATGTTAAACCTCCTCCCGCCCGAAAGACATCAGCAATCAGCGGCAGCAGCCGCTGCTGCCGCCGCCATGCACATGGCAATCGACGAAGACTGCAAATCCGATCGATCTAAGCAATCCATGGACGAGGAATTCCCCCAACCATTGGCCCTGAATCGTGACGAACGTCGAGAGTTGACGCAACAAAACGGGCAGGATTGA
- Protein Sequence
- MTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCISGPPVELLTMGLSNNNGAGGGNGGGGGSGNNNSNKNLDSNRSKDSRDLDCGGNGGNGQPGGPMGPRSSSSEPDLLSGPNSIFNPFQQGFYPDFPGGFPGLPLGMLNLLPPERHQQSAAAAAAAAAMHMAIDEDCKSDRSKQSMDEEFPQPLALNRDERRELTQQNGQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00426269; iTF_00991692;
- 90% Identity
- iTF_01318154;
- 80% Identity
- -