Dtem051844.1
Basic Information
- Insect
- Dasypolia templi
- Gene Symbol
- -
- Assembly
- GCA_963555695.1
- Location
- OY743164.1:4237776-4252620[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 5.6 8.8e+02 2.4 0.8 1 23 204 227 204 227 0.73 2 13 0.0047 0.75 12.0 1.5 1 23 319 342 319 342 0.92 3 13 0.021 3.2 10.0 0.4 2 20 380 398 379 400 0.92 4 13 2.5 4e+02 3.5 1.2 1 14 712 724 712 731 0.74 5 13 0.31 50 6.3 4.0 1 23 744 766 744 766 0.96 6 13 0.035 5.6 9.3 0.2 2 23 772 793 771 793 0.95 7 13 0.74 1.2e+02 5.1 2.9 1 19 816 833 816 837 0.73 8 13 0.0014 0.23 13.7 0.3 2 23 914 935 913 935 0.97 9 13 5.8e-07 9.2e-05 24.3 2.7 1 23 941 963 941 963 0.99 10 13 7.6e-06 0.0012 20.8 1.1 3 23 970 990 968 990 0.96 11 13 0.00085 0.13 14.4 2.0 2 23 997 1019 996 1019 0.95 12 13 0.075 12 8.3 0.1 1 20 1026 1045 1026 1046 0.93 13 13 0.00087 0.14 14.4 1.5 3 23 1058 1079 1057 1079 0.94
Sequence Information
- Coding Sequence
- ATGGCAGACACGTCAAGAAAAAGGTCGAGAAAGTCGAAATTAGTGCCTCGAGAGTGTGCTGTAGACGAAGATGATCTTGAATTGCAGgTTCCGGAGCCAAAAGTACATAAAACCGTGAAACAGACCACCAACAGACAACCAACAAAAAAGGTAGTTAAAGTACCAGAGCTAACCTTCTCAAAACCAGAAGAAGTATGCGACACTAGTGTcctaaaaaaaattaacgcTGCAGCTAAAGAAGATATGGAGCCACAATCTAAGATATCACCCAGAAAGTTCGAGATTAACATTGAAGTAGAATCCTGTGATGACGACGAATTTGCAGGAATTGCTGAAGAAAATCATGATAAAGAGTCACTCATCATGACAAAACTACGAACCGAACCAATAGAACTGTCTCGTGAAATCATACTTGATGCTGCGGAAAGTATACGCCAGACTTCTACAGACATTGCTGATAAAATCCTTAACATCTACGTTAGAAATAGTATAGGTTATGAAGATAAAAGTAAACTGTTTCTAGACAGCCAGGAGGAGCGAATTCAACAGACTTTAGATGTATGGCGTACTTGGCAGTTCCGTAGTTTTCACAGAGAAGCCCCTCTGTTCTACAAATGCTACATCTGCACGAAATCCTGGTGGTTCTTAACAGATTTCCGTAACCATTTGTCTTCTGAACATGCTAATGATTTAAAGGTTATCATTGCtttagaaaaatatgaaatgcATGAAGCTAATTTGATAGCGTACCACGAAAGGCTTGTTGTAATAAAAGATATATATACAGAAGGCCTCTGTTACCGATGCGGTAAGGATTATGGTGCGCATGAGTTGGAATCGAGGTTCGAAGAGAAATATTACAAGAATAAAGGTTGCACTAAGCAATTTTTCAGCTGTATGGGTTTAAGTAACCACTTCGCTAGCTGTCATGCCTGTACAAACGAGGATAAACCGTTCAAATGTGATATATGTAAGTCCAGATTTGATACAGAAGAGGAATTAAATAACCATTTAGTATTGTGTCATTCAGTTCGGTCCGATATACCAATAATGTCTCACTATAAGAATTGCAAACGCTGTTCGGAGAGTTATTGTTGTCTAAATGTGCACAAATGCGAACAAAAGGGACCTCACAGCGAGTGTCCCCACTGTTTACAGAGTTTCTCaaatgtcatgtcattgaaaaTTCATAAGGAACGGTCAAGTAAACCGTACAAATGTGAAATTTGCCGAGAGATGATGGCGTATAGCTGTAAAAAGTATGAACATATGTTGGCACACACGGACAAGTATATGATAGTAAGAAAATGCGTGAGGTGTAAGGGTTTGAAcgtgtttttaaataatgagGATGCAGTGGAACATAGCTTGTTGAAACACAAGAACAAGGAAACGAAACATCAAAGCTATTTTCCTAAAATTTTAGTACCATCTTCTTGCGTATTTCAAAGTTTAGCAGAATCAGAATTGAAAGAAGAAGAATTGGAACTGGATGAACAAGAATCAGTACTGGAAGAACAAGCATCCATATATGAAGATAACGAAACCATACCTGAAGAAGAAGAATCCGTGCCTGAAGAAGAAGAATCCGTGCCTGAAGAAGAAGAATCCGTaccagaagaagaagaaatcgTACCAAAAGAAGACTCAGTATCAAAAAGTGAAGGAGAATCTGTTTTAGTACGTGAACAGAAATTGTTACAGGCAGAGCTAGAATCAGCAACAGAATTCTTATTGGGAACTGTTGTTGTCAAAGAAGAGCCAGAAGACCCAGAAGGTAGCCCAAGACTTGTAATCAAAGAAGAACCATTCGAAGAATTTGAAAACCAAGTGCATGAAGAAGAAAATCGAACCGAGAATTTTGCACACGAACTAAGTGTCAAAGAAGAATACTTAGAGGAAGAATACGATGAATATGAAGGCGATATTATCAAACTGAACTTCAATGTAGAAGACTTATTAGTGAAACAAGAATCAATTCAAGAAGATGATGATCATAGTCGAGAACAGACAGAAGAGAACCAAGAATCAGAAAATGATGACCCAGAAGAATGTTCACAACAAATGAAAGACGATTCCATGATGGAACCAGAAGTTATTATAGAAGGGGATGATAGGAAAAACCAAAAAGTATACAGATGTACAAAATGTGGATTCACAGCGAAACATAAACTGTATAGAAATCACATAGATTACGACTGCCGCAAAAACTCTATCAAACATAAATCCTTTACATGcacaaaatgtcaaaataaattttcGTCTATGAAGAAATATTTGGCACATTTCAAAGAGCATGGATACAAACACCTCTCATGTCCTGATTGCTTGAAAGAATTTGATTCATTCACACTTTTAGGACAACATCTACTGCAGCATGTCAAACAAAACTTTGTTCGAGTAAAAATGATCACACACGCAGGAAAGGCCATGACAAAGCCTGATTATCAATGCAAAAAGTGCGGAAAGGTCATTGTTTCTCATAAGTTTTTTGAGCATTTCGAGTCGCATATAAACGCTCAGCCGACGCATCCTATTAAAGTGACGTCTAGGCCTAAACATAAATATGGAGAGTTGCATGAAACTATTTTAAAGGAGTGCATTGccCGCTTAACCAAACAGCCAAAAGAATGCAACCACTGTCACCGTTGGTTCAAACGAGTCAACGAATGCAAGCGCCATATCATTGAACATCTACTATCTGATGCATACAACCAGAAACACATCTACAATGAACTCAAGTGCCAAATCTGTGAACAAGGGTTCGATGTCCCAGAGAAATATAAGCAACATATGCGAGACCATGCCTCGTTACCTGTGTACAAGTGTGAACTATGTGATCGTACCTTTAGTGACTCAAGCAActtcacaaaacataaaaaagtgcATAATTTGAAAGTGATTATCTGTAATTTGTGCGGTAAAAAGTTCCAGTCGAAAGTGTCTTTGAAGAAACATATGGAGAAACACATGGACTCAGAGCCAATTACCTGCAAGATTTGCAACAAAGTCTTTTACTTCGATACTTCGTACAAGCGCCACATAAAATACTTCCACGAAAAAAACGTCGTCGGCTTCCGCTGCGTTATCTGCGGTGAACGATTCGacagtttaaaatataaatgggACCATATGTGGGAGGTGCACAAGGAAAGGAAACAGAAGGCAGACTGTCCTATTTGCCACAAATCTTTCAGGAAGTATTCCGATGTCCGTCTCCATGCAAAGCTTAACCATCTGACAGATGTTTCAGtgttaaatgtcaaaaaaaaaggaaaaaatccCAATATAGATATTGATATGTTTTTAAAGGATCctgcgaaaataaaaactggCAGGATTGAGACTTTGGTTGTgtatgattcagattga
- Protein Sequence
- MADTSRKRSRKSKLVPRECAVDEDDLELQVPEPKVHKTVKQTTNRQPTKKVVKVPELTFSKPEEVCDTSVLKKINAAAKEDMEPQSKISPRKFEINIEVESCDDDEFAGIAEENHDKESLIMTKLRTEPIELSREIILDAAESIRQTSTDIADKILNIYVRNSIGYEDKSKLFLDSQEERIQQTLDVWRTWQFRSFHREAPLFYKCYICTKSWWFLTDFRNHLSSEHANDLKVIIALEKYEMHEANLIAYHERLVVIKDIYTEGLCYRCGKDYGAHELESRFEEKYYKNKGCTKQFFSCMGLSNHFASCHACTNEDKPFKCDICKSRFDTEEELNNHLVLCHSVRSDIPIMSHYKNCKRCSESYCCLNVHKCEQKGPHSECPHCLQSFSNVMSLKIHKERSSKPYKCEICREMMAYSCKKYEHMLAHTDKYMIVRKCVRCKGLNVFLNNEDAVEHSLLKHKNKETKHQSYFPKILVPSSCVFQSLAESELKEEELELDEQESVLEEQASIYEDNETIPEEEESVPEEEESVPEEEESVPEEEEIVPKEDSVSKSEGESVLVREQKLLQAELESATEFLLGTVVVKEEPEDPEGSPRLVIKEEPFEEFENQVHEEENRTENFAHELSVKEEYLEEEYDEYEGDIIKLNFNVEDLLVKQESIQEDDDHSREQTEENQESENDDPEECSQQMKDDSMMEPEVIIEGDDRKNQKVYRCTKCGFTAKHKLYRNHIDYDCRKNSIKHKSFTCTKCQNKFSSMKKYLAHFKEHGYKHLSCPDCLKEFDSFTLLGQHLLQHVKQNFVRVKMITHAGKAMTKPDYQCKKCGKVIVSHKFFEHFESHINAQPTHPIKVTSRPKHKYGELHETILKECIARLTKQPKECNHCHRWFKRVNECKRHIIEHLLSDAYNQKHIYNELKCQICEQGFDVPEKYKQHMRDHASLPVYKCELCDRTFSDSSNFTKHKKVHNLKVIICNLCGKKFQSKVSLKKHMEKHMDSEPITCKICNKVFYFDTSYKRHIKYFHEKNVVGFRCVICGERFDSLKYKWDHMWEVHKERKQKADCPICHKSFRKYSDVRLHAKLNHLTDVSVLNVKKKGKNPNIDIDMFLKDPAKIKTGRIETLVVYDSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01526599;
- 90% Identity
- -
- 80% Identity
- -