Basic Information

Insect: Dasypolia templi
Gene Symbol: -
Assembly: GCA_963555695.1
Location: OY743138.1:29572406-29576369[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 4.2e-05 0.0067 18.5 0.8 1 23 17 39 17 39 0.97

2 15 0.00017 0.026 16.6 2.7 1 23 60 82 60 82 0.96

3 15 0.0026 0.4 12.9 0.0 1 23 105 127 105 127 0.93

4 15 7.6 1.2e+03 2.0 1.3 5 23 135 154 132 154 0.93

5 15 0.011 1.7 10.9 0.3 1 23 248 270 248 270 0.98

6 15 2.1e-06 0.00033 22.6 2.1 1 23 276 298 276 298 0.98

7 15 0.02 3.1 10.1 1.7 1 23 305 327 305 327 0.91

8 15 5.7e-06 0.0009 21.2 5.6 1 23 333 355 333 355 0.98

9 15 2.3e-05 0.0036 19.3 0.7 1 23 361 383 361 383 0.97

10 15 1.7e-05 0.0027 19.7 1.2 1 23 389 411 389 411 0.98

11 15 5.9e-06 0.00093 21.2 3.6 1 23 417 439 417 439 0.97

12 15 5.7e-05 0.0091 18.1 1.0 1 23 446 469 446 469 0.98

13 15 1.5 2.4e+02 4.2 0.6 5 17 480 492 478 493 0.89

14 15 0.11 17 7.8 0.1 2 20 501 519 500 521 0.91

15 15 5.2 8.2e+02 2.5 2.5 2 21 525 544 524 546 0.70

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	4.2e-05	0.0067	18.5	0.8	1	23	17	39	17	39	0.97
2	15	0.00017	0.026	16.6	2.7	1	23	60	82	60	82	0.96
3	15	0.0026	0.4	12.9	0.0	1	23	105	127	105	127	0.93
4	15	7.6	1.2e+03	2.0	1.3	5	23	135	154	132	154	0.93
5	15	0.011	1.7	10.9	0.3	1	23	248	270	248	270	0.98
6	15	2.1e-06	0.00033	22.6	2.1	1	23	276	298	276	298	0.98
7	15	0.02	3.1	10.1	1.7	1	23	305	327	305	327	0.91
8	15	5.7e-06	0.0009	21.2	5.6	1	23	333	355	333	355	0.98
9	15	2.3e-05	0.0036	19.3	0.7	1	23	361	383	361	383	0.97
10	15	1.7e-05	0.0027	19.7	1.2	1	23	389	411	389	411	0.98
11	15	5.9e-06	0.00093	21.2	3.6	1	23	417	439	417	439	0.97
12	15	5.7e-05	0.0091	18.1	1.0	1	23	446	469	446	469	0.98
13	15	1.5	2.4e+02	4.2	0.6	5	17	480	492	478	493	0.89
14	15	0.11	17	7.8	0.1	2	20	501	519	500	521	0.91
15	15	5.2	8.2e+02	2.5	2.5	2	21	525	544	524	546	0.70

Sequence Information

Coding Sequence: ATGAAACTGGGACCGGAACTGCTAGTAAAGCTGGAAAACCTGAATATATACAGGTGTGAGAAATGCCCAAAAGTCTTCCCAAATACTATTGACCTCATGAAACATAAGTCTTATCATGATGAATACTTCTTATCACATgttgtcAGTGCATATGTTTCTGTAGAAAGGGCAAGAATATTCAAATGTGACAAATGCACTAAAACATTTGATAATAACAGAAATTTTATGCTTCATAAGCTTGCTCACATACAGGAGAATGTGAGAAATGTAAGAAGAATCAGCAAATTTCAGAACCATGATATTGTGAAACCCTACAAGTGCCCAGATTGCGATGTTAGTTATGCTGCGCAAAGTACTCTTGATGAACATTCTATTCTTCACTTGCCATTCCCTCACATCTGTGAGTGTGGCATTGGATATTACAAGAAACAGGATTTGAAATGCCACATCAAATTGGTACATGGAACAAAAACTAAAGTAGAGTTGACTTTGTCGCAAAATTTAGATCCACAAGAGGAAGTAGTTATACCCCAAACAAAGCCCCAAGACAAACCCCAAAGAAAGtctaaatctaaatccaagAAGGGAACAACAATAAAAGAAACTGTAAAAAAGGAAAATCCTAAAAAGAAAAAGTGGAAAGTTACCCTGAAAGGTGAAGATACTAACAGCAATAAGCAAAAAACAGAATGGAATGTAAGAAACCCCGATATAGAAATCAGAAAGACCTCCGATAATAAGTATGAATGTCCtgaatgtaagaaattatttgcTTGGAAACAATATGTTATTACACATTACCGCGTTCACTCTGGAGAACGCCCATACACTTGCCATTTATGTCCGAAGGCGTTTAGCCAGAAGATCACACTAAAAACACATATAGAGCGGCACATGAGCACAGAGAAGATCTATAAGTGCAAGTTTTGCCCTAAAGCTTTTTCAATGACGTACTATAGGGATCGCCATGAAGATATACACAGCTCGATTAAGGCTCACGAGTGTCCGTACTGCCACAAGGGATTCCACGACCAGTCCGCATTGATACGCCACAAACGAACACACACGGGAGATAAACGATACTGCTGCCCTTACTGCCCTAAAACATTCAGTGACGTCAGTGGCCTCGGCGCACATAAATTACGTCATGAGAACAAAAAAGATTTTCAGTGTGAAATTTGCTATAAGAGATTTTATAATCGATCTGATGTAAAGTCACACATGGTGGTTCACACTAATGAACGAAACTTTGCTTGTGactattgcaaaaaatgtttcACTCGTAAACCAAATTTAATGATGCATGTACAGAGGCATATGATTATAAAGAAGCATTTCGTATGCGCGGAGTGTAACAGGAAGTTTCTCACAAAGGAGTATCTAAAAACCCATATAAGGActgtgcacaaaaaaaatacatccagACGCTTACATAATGATTGCTCAAAAGAGTTCAGAAATAAAGAATGTTTACAGAGTCTGAGTTCTCATTCAAGTATTCGTTGTGATGAGTGCTCGCGGTATTTTGCAAGTCCAACCCTTTTCGAAGGGCACAAGTTGATAGAGAGTGTACAATGTGAAATTTGTGATGAgaagtttttttgtgaaaatatgaaagagaagCATTTTAAAGTTCATTTTCCCAGAAGTGTAAAAGACATTGAAAGTGAGACAAATAGCCAGAAATAA
Protein Sequence: MKLGPELLVKLENLNIYRCEKCPKVFPNTIDLMKHKSYHDEYFLSHVVSAYVSVERARIFKCDKCTKTFDNNRNFMLHKLAHIQENVRNVRRISKFQNHDIVKPYKCPDCDVSYAAQSTLDEHSILHLPFPHICECGIGYYKKQDLKCHIKLVHGTKTKVELTLSQNLDPQEEVVIPQTKPQDKPQRKSKSKSKKGTTIKETVKKENPKKKKWKVTLKGEDTNSNKQKTEWNVRNPDIEIRKTSDNKYECPECKKLFAWKQYVITHYRVHSGERPYTCHLCPKAFSQKITLKTHIERHMSTEKIYKCKFCPKAFSMTYYRDRHEDIHSSIKAHECPYCHKGFHDQSALIRHKRTHTGDKRYCCPYCPKTFSDVSGLGAHKLRHENKKDFQCEICYKRFYNRSDVKSHMVVHTNERNFACDYCKKCFTRKPNLMMHVQRHMIIKKHFVCAECNRKFLTKEYLKTHIRTVHKKNTSRRLHNDCSKEFRNKECLQSLSSHSSIRCDECSRYFASPTLFEGHKLIESVQCEICDEKFFCENMKEKHFKVHFPRSVKDIESETNSQK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00173458;
90% Identity: -
80% Identity: -