Dtem052241.1
Basic Information
- Insect
- Dasypolia templi
- Gene Symbol
- -
- Assembly
- GCA_963555695.1
- Location
- OY743164.1:9901339-9903669[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 4.5e-06 0.00072 21.5 4.2 1 23 8 31 8 31 0.95 2 22 0.00074 0.12 14.6 0.8 2 23 37 59 36 59 0.94 3 22 2e-05 0.0031 19.5 0.3 2 23 68 90 68 90 0.97 4 22 1.1e-05 0.0018 20.3 2.3 2 23 99 121 98 121 0.95 5 22 1.7e-05 0.0026 19.8 2.4 2 23 129 151 129 151 0.96 6 22 5.4e-06 0.00086 21.3 2.4 2 23 160 182 159 182 0.96 7 22 7.6e-07 0.00012 24.0 1.1 1 23 188 211 188 211 0.98 8 22 8.2 1.3e+03 1.9 1.1 2 23 220 241 219 242 0.92 9 22 0.0048 0.77 12.0 1.5 1 23 253 276 253 276 0.97 10 22 0.00073 0.12 14.6 0.6 1 23 301 324 301 324 0.97 11 22 4.6 7.3e+02 2.6 0.9 2 21 332 351 331 352 0.90 12 22 0.016 2.5 10.4 2.3 2 23 361 383 361 383 0.95 13 22 0.0019 0.3 13.3 6.1 1 23 403 426 403 426 0.97 14 22 3.6e-05 0.0056 18.7 0.4 2 23 433 455 432 455 0.96 15 22 4e-05 0.0064 18.6 2.1 2 23 462 484 461 484 0.94 16 22 0.008 1.3 11.3 2.2 1 23 490 513 490 513 0.97 17 22 0.25 40 6.6 4.8 2 23 521 543 521 543 0.95 18 22 0.00017 0.027 16.6 0.6 1 23 550 573 550 573 0.97 19 22 0.086 14 8.1 2.4 1 23 580 603 580 603 0.88 20 22 0.041 6.5 9.1 2.8 5 23 620 639 617 639 0.90 21 22 1 1.6e+02 4.7 0.3 3 13 661 671 660 676 0.82 22 22 7.8 1.2e+03 1.9 0.6 1 12 689 700 689 702 0.58
Sequence Information
- Coding Sequence
- ATGTATCAAAACCAATTAGATTTCGTTTGCGACTACTGCTCAAGAACTTttacaagaaaatataatttacaaaCTCATATAGAAAACTGTCATATCAATTCTTCATGCCACTGTAATATCTGTGGCCAGAATTTCGGCAGTCCGGCGGGATTGATACAACATTTATCCAGAGGCCATAACAACTATGGCCAGCCCTTCCCCGAATGTGAACTGTGCGGACGAATCTTCACCAGAAAacagaacataacatcacatatGATAACTGTACATCTACAAGGACTTGGCTACGAGATACGGTGTCGGTTGTGTAAGAAAACGTTCACAACAGAACGGAATTTGAAAAGGCATATCAATCAGTTGCATAATCCTGATGTTGAGTACCCCACGTGTAACGACTGTCACAAGGTGTTTAGAGGAAAGCACTCGCTCATTGCCCATATACAATCAGTTCATAATGTGAGCGAAAGAGACGCTATCAAATGCCATTTGTGCGAAAAAGTGTACACTAATAACAGGAATTTGAAACGTCATATAGAGATGTTTCACGGCGTAAAGGGGGAGTTTAGATGCGACATCTGCCCAAAAGTATACACTTCGAACCAGAGCTTGAGACGGCATGCAAGAACGAGACACAACACCGACAGCCAGGAACATTTGACATGCAACTTTTGCATGAAAGTTATCATCGGACGAGAAAATTTCGACAGCCATATTCAATTTCACCACCAAGACACCGATATGGATACCAGAAACGAATTTGTGTGCGCGTCGTGCGACAAAAGTTTTGAAGAAGAGTTTTGTTTGCGGCAACACGTAAAATcagaacactcttttaaaaccTTCTACAAGTATTGCAGGAAATCGTTACTCAAACAATACGGGATGGACACGCAACACATATACAATTGTGAATATTGTGACAATTCTTTTTTAACTGTGTACGAGCTTAAAGATCATATGCGCGTCAACCACGACACTGAGTACTCCCTATCAACTTGCAACgtttgttttaataagttttttagTAAAGAAACTAGGTCTGCGCATAGGAATGTGTGTCTACCACCGCCAAACGTGAACACTTGCAGCCACTGCGACAAACTCTTCACTGATATTTCAAGCTTAGAATTTCATACGAGAATTTTTCATCCTCAAGCTCAAATCGCAGATATTTCATCTACAAATATAGATGAAGAAGCTGTGTCATTCAAGTGTGAGCATTGCGATCGCATTTATTACAGCGACAGATCCCTGAAACATCATATGAAGCTAAAACACACTACAGATGAAGAAGTGGAATGCGAATTGTGTGGAAAAATTTGCAGTAACAAGTATTATTTAGCTTCACATATTAAAATCGTCCATAATAACGATTCTTGGTCGCGATGCGAATACTGTGATAAACAGTTTAAATCGAAAAGGAATATTAGAAGGCATATTGAATACACTCATTTGGGCATGCAACGGTACAAATGTATCGAATGCGAGACCTTGTTTAAGGAAAAACGGAGTTTGAGAAAACATGTTCGAACGAAGCATCCTAATTCAGCGGCTTTTCCTCAGTGCCACATCTGTTACAAACGATTTGAGTCAGCGAAATCTTGTAAGATACATCTTAAACTGTTGCATTCTTTCAACATGAACACTTTTCCATGTCACCTCTGTTCCGTGTCCTTCAGTTCCAATGAGGCACTAAGTATCCATCTAGAAACCAAACACTTAGCTGAAGATCAAATCTACAAATGTGAGCAATGCAACTTAGTTTTTAAAGGGCAGGAAAAGTTTGACTCACACAATGATGTCTGCCACGTCAATTTAGTCCCTACGATCAAGCAGAAAGTTCTCCCCAGATGCATTCTATGCATGAAAGATTTTAGCACAAGGAAAACGTTAAAGCGACATATAAAGAAATTCCACGAGGAATTTGATGTGGATGAGTTAGCAAATTTTGGATCGAGACGTAGAACATTTACAGTTGATTGTGAGGAGTGTAACAAGAATTTCAACGATGATTTCTATTTGAGCGTCTATAATAAGCTAAAGCATTTTAGAGACTCGGAAGTATTTAAATGTGGGACTTGTTTCGAGTCCTACAACTCTCTGGAGTTCTCTATACAGAGGTATAAGGTAACTAACGCCGATACTAGCAAAAGCAAAATGATTTTGAGCGAACTTTGTACCACGGAGATGAGTGAAGAAGAGCATGACTTCTCTAACTTCGGAGCTCTGCATGATATGTTGCCGGAGAGTACTACTGGTGATTTACACATAAAATTAGAACCTGTTGATGATTCGGAGATTGAAATCAAGACGGAGCCGCCGTCGCCGTAA
- Protein Sequence
- MYQNQLDFVCDYCSRTFTRKYNLQTHIENCHINSSCHCNICGQNFGSPAGLIQHLSRGHNNYGQPFPECELCGRIFTRKQNITSHMITVHLQGLGYEIRCRLCKKTFTTERNLKRHINQLHNPDVEYPTCNDCHKVFRGKHSLIAHIQSVHNVSERDAIKCHLCEKVYTNNRNLKRHIEMFHGVKGEFRCDICPKVYTSNQSLRRHARTRHNTDSQEHLTCNFCMKVIIGRENFDSHIQFHHQDTDMDTRNEFVCASCDKSFEEEFCLRQHVKSEHSFKTFYKYCRKSLLKQYGMDTQHIYNCEYCDNSFLTVYELKDHMRVNHDTEYSLSTCNVCFNKFFSKETRSAHRNVCLPPPNVNTCSHCDKLFTDISSLEFHTRIFHPQAQIADISSTNIDEEAVSFKCEHCDRIYYSDRSLKHHMKLKHTTDEEVECELCGKICSNKYYLASHIKIVHNNDSWSRCEYCDKQFKSKRNIRRHIEYTHLGMQRYKCIECETLFKEKRSLRKHVRTKHPNSAAFPQCHICYKRFESAKSCKIHLKLLHSFNMNTFPCHLCSVSFSSNEALSIHLETKHLAEDQIYKCEQCNLVFKGQEKFDSHNDVCHVNLVPTIKQKVLPRCILCMKDFSTRKTLKRHIKKFHEEFDVDELANFGSRRRTFTVDCEECNKNFNDDFYLSVYNKLKHFRDSEVFKCGTCFESYNSLEFSIQRYKVTNADTSKSKMILSELCTTEMSEEEHDFSNFGALHDMLPESTTGDLHIKLEPVDDSEIEIKTEPPSP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00447464;
- 90% Identity
- iTF_00072251;
- 80% Identity
- iTF_00425671;