Basic Information

Insect: Dastarcus helophoroides
Gene Symbol: -
Assembly: GCA_028583605.1
Location: CM053328.1:5106880-5125649[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 8.6e-05 0.011 17.1 2.4 1 23 386 408 386 408 0.97

2 18 6.9e-05 0.0093 17.3 2.5 1 20 414 433 414 436 0.94

3 18 3e-06 0.0004 21.6 2.0 1 23 442 464 442 464 0.98

4 18 7.9e-06 0.0011 20.3 4.4 1 21 470 490 470 492 0.95

5 18 2.6e-05 0.0035 18.7 4.6 1 23 498 520 498 520 0.99

6 18 2.5e-05 0.0033 18.8 5.3 1 23 526 548 526 548 0.97

7 18 2.5e-05 0.0034 18.7 7.0 1 23 554 576 554 576 0.97

8 18 9.6e-08 1.3e-05 26.3 2.7 1 23 582 604 582 604 0.98

9 18 7.1e-05 0.0095 17.3 6.7 1 23 610 632 610 632 0.97

10 18 8e-06 0.0011 20.3 5.6 1 23 638 660 638 660 0.97

11 18 4.6e-07 6.1e-05 24.2 2.8 1 23 666 688 666 688 0.98

12 18 6.4e-06 0.00085 20.6 7.8 1 23 694 716 694 716 0.98

13 18 6.2e-05 0.0083 17.5 8.1 1 23 722 744 722 744 0.98

14 18 1.7e-05 0.0022 19.3 7.7 1 23 750 772 750 772 0.98

15 18 1.1e-05 0.0014 19.9 7.1 1 23 778 800 778 800 0.97

16 18 0.00011 0.015 16.7 0.4 1 23 806 828 806 828 0.97

17 18 0.086 12 7.6 5.0 1 23 838 860 838 860 0.98

18 18 1.1e-06 0.00015 23.0 0.8 1 23 866 888 866 888 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	8.6e-05	0.011	17.1	2.4	1	23	386	408	386	408	0.97
2	18	6.9e-05	0.0093	17.3	2.5	1	20	414	433	414	436	0.94
3	18	3e-06	0.0004	21.6	2.0	1	23	442	464	442	464	0.98
4	18	7.9e-06	0.0011	20.3	4.4	1	21	470	490	470	492	0.95
5	18	2.6e-05	0.0035	18.7	4.6	1	23	498	520	498	520	0.99
6	18	2.5e-05	0.0033	18.8	5.3	1	23	526	548	526	548	0.97
7	18	2.5e-05	0.0034	18.7	7.0	1	23	554	576	554	576	0.97
8	18	9.6e-08	1.3e-05	26.3	2.7	1	23	582	604	582	604	0.98
9	18	7.1e-05	0.0095	17.3	6.7	1	23	610	632	610	632	0.97
10	18	8e-06	0.0011	20.3	5.6	1	23	638	660	638	660	0.97
11	18	4.6e-07	6.1e-05	24.2	2.8	1	23	666	688	666	688	0.98
12	18	6.4e-06	0.00085	20.6	7.8	1	23	694	716	694	716	0.98
13	18	6.2e-05	0.0083	17.5	8.1	1	23	722	744	722	744	0.98
14	18	1.7e-05	0.0022	19.3	7.7	1	23	750	772	750	772	0.98
15	18	1.1e-05	0.0014	19.9	7.1	1	23	778	800	778	800	0.97
16	18	0.00011	0.015	16.7	0.4	1	23	806	828	806	828	0.97
17	18	0.086	12	7.6	5.0	1	23	838	860	838	860	0.98
18	18	1.1e-06	0.00015	23.0	0.8	1	23	866	888	866	888	0.96

Sequence Information

Coding Sequence: ATGAATTCAAGTGATAATAACCCTCTGACAGGGAATCCAAACAATTCGGAGGGAAACTCACAGAGATCCGTACCTTCATCTACAATACCTACAGACTTACGTGTTAACACAACAGCACTAAATACAGTCGCTTTAAGCAGTGTTGCAAAATACTGGGTACTCACAAATTTGCTATCAGCCCCAATACCTCAAGTTTCTGTTTATGGACTTCCCGGTAGAGGAGAGAATCAAGGAAAATTGACGCAGGAAGCCATGCTGTCTCAACATGCTGGTCTGCTTCCAGCAGACCCATTGCTCCTCCAACAACACTCTCAAATCCCAGTCAGCATAGCCACTTCTCCAAGGAGTAACGAACCTGACGATACCAGCGAGTGCCATGCATCTCGAAAATCATCACGGCCACAACTCATGCCCACATCACATTCTCAGAATCAACAGCAGCAGAACCATTCCCAGCAGCAGAATCATACTCAACAGCAGAATATGGTCCAAGTTCAAGTGCAGGATAATTTAGTGTCTGTTATAGAAGACAACAAGGATCATAAAGACATCATATCTGCTCAACTGGCTCAAGCTCAGCTGCATCTGAATGACAACCAGCATTTGAATCAGCAGGCCCTAACAGTGCAACAGTTGCAGCACATGCAAGTGCAGCAAGTGCTGGATAATGTTgtCCGCATGGAGAATTCCGTGGAAAACCAAAACCAGTCGAATAACGAACAAGTTAATCTCCCAGACAACATTCACCTAATAAAAGACGAAAAAATACTCCAAAATTGCAAACTCTTTCAAGGACAGTTCGGTTTGCAAGACCTAAAAAATAACCTGATGGACGTCCGAACCGCCGACGGTACTTTGGTGAAAATTTCCACGAACCTCCAAGAACAGGAGCTGACTAAAACTCTGGGGGTGGAAATGGTCCAAAATATGTATAAAGTGAACGTTGATGATCTCAACCAACTCTTAGCCTATCATGAAGTTTTCGGGAAATTACAAGCTGATGTACCGAACTCTAATAATCAGAATGTTATACAAAATACGCCAAACCCGGTCTTGCAACCCCAAAATTCTAATATTAGCTCCGTCAATAAGGTGGAGCAAGAGGCCGGTACTAGTACTTTGACGGAAAACGGACCCCCTATTATGACCGGAAATCACGTGTGCGATTTATGTGGGAAAATGTTTCAGTTCCGATATCAGTTAATCGTTCACAGGAGGTACCACACTGAAAGAAAACCCTTTACGTGCCAAGTCTGTGGGAAAGCATTTACGAATTCTCAAGAGTTGAGTCGCCATGGCAAGTGCCATTTGGGTGGTAGCATGTTTACCTGTTCTGTATGTTTCCACGTTTTTGCCAACGCCTCTTCATTGGAACGTCACATGAAGCGACATTCGACTGATAAACCCTATAATTGCACCATATGCGGTAAATCTTTTGCTAGGAAAGAACACCTTGAAAACCACACGAGGTGTCACACTGGCGAAACGCCATATAGATGTCAGTATTGTGCAAAGACTTTTACTCGTAAGGAACACATGGTTAATCATGTGAGGAAACATACGGGGGAAACTCCACATCGATGCGAAATTTGCAAGAAGTCGTTTACACGAAAGGAACATTTTATGAATCACGTGATGTGGCATACTGGTGAAACACCACATCACTGTACCGTTTGTGGCAAAAAGTACACCAGGAAGGAACACTTGGCTAACCATTTAAGATCTCATACCAACGATACTCCTTTCAGgTGCGAAATTTGCGGCAAATCCTTTACAAGAAAAGAACACTTCACGAATCACATAATGTGGCACACCGGCGAGACACCTCATCGATGTGACTTTTGTTCGAAAACGTTCACTCGCAAGGAACACTTACTCAACCACGTGCGACAACATACAGGCGAATCTCCTCATCGTTGCGGTTACTGCTCGAAATCGTTTACACGTAAAGAGCATTTAATCAACCATGTACGCCAGCATACTGGGGAAACCCCGTTCAGGTGTAGTTACTGTCCGAAAGCTTTCACGAGAAAGGATCATTTGGTCAATCACGTCAGACAACATACGGGGGAGTCCCCGCATAAATGTACGTATTGTACGAAGTCTTTTACTAGGAAGGAGCATCTGAATAATCACGTTAGACAACATACTGGAGAATCGCCGCATCGTTGCCATTTCTGCGCCAAATCATTCACTAGGAAAGAACATTTAACCAACCATGTTCGGATACATACGGGAGAATCTCCACATCGTTGCGAATTCTGTCAAAAGACATTCACCCGCAAGGAACATCTGACCAATCACTTGCGCCAACACACCGGGGAAACCCCTCACTGCTGCAACGTCTGCTCCAAACCGTTTACCAGGAAAGAACACCTCATAAATCACATGAGGTCCCACACGGGCGAACGTCCGTTTGCTTGCACGGAATGCGGCAAATCCTTCCCCCTTAAAGGAAACTTGCTGTTCCATTTAAGATCTCACAATAAAGGGGCGGCGGCGGAAAGACCTTTTAGATGCGATTTATGCGAGAAGGATTTCATGTGTAAAGGGCATTTGGTGTCCCACAGAAGATCTCATAGCGGTGAAAGACCACACGCTTGCCCCGATTGTGGGAAAACGTTCGTCGAAAGAGGTAATATGCTGCGGCATCTGCGTAAACACGCGGCGGAGAACGGCGATGCGCAGTCGCCCCCGCAGCAGATTCCCTCGCAGCCCCAACAAACGAGCAATGTGCCTCAAAATCAACCACAAACATCACCGGCTAACTTACAGATTCCGCAAGTGAGCCAGGCTCAATCTGCATCCACCAGTAGCGCCTCGAACATCGTTTCACCCAACCAACACATGCCCATGCACCCTCCGCCACCGCCGGCGAATTTGCCAGTGGTTGTGCCTACACCCAGTGGAAATGTTTTAGCTACGTACTAA
Protein Sequence: MNSSDNNPLTGNPNNSEGNSQRSVPSSTIPTDLRVNTTALNTVALSSVAKYWVLTNLLSAPIPQVSVYGLPGRGENQGKLTQEAMLSQHAGLLPADPLLLQQHSQIPVSIATSPRSNEPDDTSECHASRKSSRPQLMPTSHSQNQQQQNHSQQQNHTQQQNMVQVQVQDNLVSVIEDNKDHKDIISAQLAQAQLHLNDNQHLNQQALTVQQLQHMQVQQVLDNVVRMENSVENQNQSNNEQVNLPDNIHLIKDEKILQNCKLFQGQFGLQDLKNNLMDVRTADGTLVKISTNLQEQELTKTLGVEMVQNMYKVNVDDLNQLLAYHEVFGKLQADVPNSNNQNVIQNTPNPVLQPQNSNISSVNKVEQEAGTSTLTENGPPIMTGNHVCDLCGKMFQFRYQLIVHRRYHTERKPFTCQVCGKAFTNSQELSRHGKCHLGGSMFTCSVCFHVFANASSLERHMKRHSTDKPYNCTICGKSFARKEHLENHTRCHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVMWHTGETPHHCTVCGKKYTRKEHLANHLRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGYCSKSFTRKEHLINHVRQHTGETPFRCSYCPKAFTRKDHLVNHVRQHTGESPHKCTYCTKSFTRKEHLNNHVRQHTGESPHRCHFCAKSFTRKEHLTNHVRIHTGESPHRCEFCQKTFTRKEHLTNHLRQHTGETPHCCNVCSKPFTRKEHLINHMRSHTGERPFACTECGKSFPLKGNLLFHLRSHNKGAAAERPFRCDLCEKDFMCKGHLVSHRRSHSGERPHACPDCGKTFVERGNMLRHLRKHAAENGDAQSPPQQIPSQPQQTSNVPQNQPQTSPANLQIPQVSQAQSASTSSASNIVSPNQHMPMHPPPPPANLPVVVPTPSGNVLATY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00167784;
90% Identity: -
80% Identity: -