Basic Information

Gene Symbol
ZBTB40
Assembly
GCA_949768715.1
Location
OX458319.1:15121259-15125000[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 0.0016 0.1 14.2 0.5 2 23 159 181 159 181 0.96
2 20 2.6 1.7e+02 4.1 0.4 1 20 303 322 303 324 0.89
3 20 0.48 32 6.3 0.3 1 23 353 376 353 376 0.96
4 20 0.43 29 6.5 3.7 1 19 409 427 409 432 0.90
5 20 0.084 5.5 8.7 4.3 2 23 493 514 492 514 0.97
6 20 0.069 4.6 9.0 1.9 2 23 522 544 521 544 0.91
7 20 0.029 1.9 10.2 0.0 1 23 557 579 557 579 0.97
8 20 0.022 1.5 10.6 2.7 2 23 583 604 582 604 0.97
9 20 6.8e-05 0.0045 18.5 0.5 2 23 627 648 626 648 0.95
10 20 0.0048 0.31 12.7 4.3 1 23 671 693 671 694 0.95
11 20 0.96 63 5.4 0.2 2 23 702 723 702 723 0.94
12 20 8.3e-06 0.00055 21.3 3.4 1 23 759 781 759 781 0.98
13 20 0.25 16 7.3 2.8 3 23 797 817 795 817 0.96
14 20 0.0022 0.15 13.7 1.3 1 23 840 862 840 862 0.98
15 20 0.00012 0.0079 17.7 1.1 1 23 875 898 875 898 0.95
16 20 0.00041 0.027 16.0 0.4 1 23 913 935 913 935 0.95
17 20 0.41 27 6.6 0.1 3 23 971 992 969 992 0.94
18 20 0.029 1.9 10.2 2.0 2 23 1003 1024 1003 1024 0.97
19 20 0.0045 0.3 12.7 2.0 1 23 1039 1061 1039 1061 0.98
20 20 0.00064 0.042 15.4 0.3 1 23 1083 1106 1083 1106 0.94

Sequence Information

Coding Sequence
ATGAATAAAACACTGATAAAATCCAATAAACCTTGGAGAAAACCGTTCATAAAAATTAACCAATCCAATAAGTTATCTACAATGATTTGTACCCAATGTCTTGGTAAAATTAATGGATGGtgctactttaaaaaaacatgttcCGACAATCAAACCAAGCTGATGTCATGGCTTCATTCCTGGGAAACTTACAATGATAATAATACGAGCATTCAAATTAAAGATGAAATCATTGAAGCCGACGTTGAGAGAGACATGAAGGTTATCAGTGATGATGAGACActtcaagttaaaattgaaaatgaagaaCCAATGGATATGCACTACGAAGATCCTCCTCCTCCCTTAACACCTCATCTTCCACAAAATTTCGATCTGCTTGCAGATGATGATGTTGACGCATCCAAAACCAATCTCTTGATTTCTTTTAAAGAGATTCCTGAAGAAGACACTGGTTCGCAAAATGATTCTcgagtttgtaaaatttgcgATAAGTTGTTCAGCAGAGTTGCGAACAGGAAGAAGCACGAAAGGGTGGTGCATggattaaaatcaaaatcaaatcTCGTCGATTTGGAGGATTCTGTTGATAATGATGAAAGTTCACAACAATCTGTAGTATCTCGCGGAAGCGCCAACCATGACTCCATGGCTTTAATGGTTTTCCACGAAGTTGATTCCCGAGAAATTGAATTTGCTACAACACTCAGACTTCAACAGAGAACACCAACCCAAAACACAACAGAAAGCGTATCATTAACCAAATCAGAATTGTGTTACATAGAAAAATGCAAGTTGGTTTCCAAAATGTTAAATACGATGATCTGCACTTGCCACTCTATGGGGCACGCAACTGTCAAGACCCTCTTTAAACACTTGCGTGACCAGGGGATGTATATCCCAATTTTTACTTGTTTCATATGTTTAATTACCTATACAGACCGATCCACAAGTGCCAGACATCGAGTTAAATGCACGAGATTGCATAGTGATAAGGTTTTGGAGGTTACCAAGTTTCAGAAGCAGTCCGCCTTAAGAATTAGGTCATATCAAAGATTCAAGTGCGTAACTTGCAAGAGCATATTTACATTCATGGATGATTTTGGTGAACACATGATTGTGGAACATTGCCAAGGTTCAGGACCATTCAATTGTTCCTGTCCTCAACAATTTGATAAAGTTGATGAATTCAAGGAGCATCTCCAAACTGCTTGCTTGGTACAtcatttttgtgatatttgttttgaaattttttcaactCTTCAAGACTTCAGACGTCACTGTGAGGTCAACCACGATAATTGTACGGGTGTTACCATATTTAACGTACAGCAGAATAAAAAGGGCAAATTAACCGCCAGCAACCGAATGCTTGCAGCCAATGGTTCAAATTATTCAACAAGTTCATCAGCTGCTGTAAATCGTTCTTCAACTTCTTTGAACAATTCAGAAGCTCCTTATTTTGCTCAGCCGACACGTTGCACCGTTTGCAAGAAGCTGTATTCATCGTATCATAATATGTTGCGACACTTCAAAATCCATGATCCTTCCCAAAAGGCTTGGAGATGTGAGCATTGTCACGAAAATTTCCGACTTGTTACTCAGTTAACTGAACATTTAACTGATGTACATGGAATTCAGGACAGTAATGATTCGAGCAACTACAAGTTTTCTTGTCCTGATTGTGGAGAATTGTTTGAGGCTTTGGAACAATGGACGGAGCACAAAGAAACTCACCCTAAGAAAAAGTGTTCTGAATGTGAGAGAGAATTCACCTTGCAAACTGAATTAGATCACCACAGGAGTATGCATTTAAATCTGAAGGTTCACAAATGCACAAAAACTCACGACTACAAAAGTGCCGTTATTGGCATGTTGATGTGTGAGATCTGTGACAAGACTTTTGATTCGACGAGTGAATTAAGGCAGCACAAATTACTTCATGAAAAAATGCCGATTTTAATTCCTGTAGAAAACAGCGATGACGAGGGGGGCAAGAGATACAGCAAGTATCATTGTTCCATCTGCAATAAAGATTACGCCAGATACAGTGGACTCTGGAATCACAATAAAAAGCACCATCCGGGAAAACAATTCCAAGAGGAATGTAAATATTGTGATCGAATTCTATATTCTTCAAATGCCGCTGCCATGCACAAGCAAATGCACGAGCGCTTAACCCAAGAAGAATTGGTGTCcacaataagaaaaaattccCCAAGATGCAAACGAACAATGGTGGCTGGTGGAACAGATGATGATTCTGAATCTTACCACACTTGTGACAAATGTTTCAAAGTTTTTGCAAGCAAAAGCAACCTCAGAGGTCACATGAAATCGCACGGAATCATATTGGGTTTGAGCAGAACACAAGGAAATAAAATGAACTGCAACGTTTGCCACCAAGTATGCAATGGTTTCGAAGACCTTGAGCAACACAAAAGGGAACATTTGACTGAAGACATGCCAGAACTTCCTAATCAAGTCGTCGAAATTGAAGATGATAAGATGCAGGTTTTCACTTGTGACTTGTGCACTACAATATTCAATTCGAGGATCGCTTTGAAGAAACATAAGGAACGTCACGACCAAGAACAAAACTTTGTGCTGAGCAAGACGGTGTTctattgcaaattttgcaaGGTATCATTTAGTAATGAAGAGAGTTTAACAGTCCACATGAAAGATGAGCACCAagttttgtcaaaattaaagACTAAAACGGAGCCAAACAAGTTCTACTGTTCAATTTGTAAGAAGGTGTTTAATACCATGGGATCGCTTTCAATTCATCAAGGTTGGCACAAGAGAATTTCAAAAACGTCTAAACACATGAAATTGAAGAAGAAATTGTGTCAAAAAATGCACGATAAAGTTAACAAATCTGAGAATGGAGTGCAAAGTTTCGGTTGTTACTTTTGTTCAGCTTCATTTCCGACCGACACTGCTTTACAGATTCACATTTTGGAAGttcacaaaaatatgaatGCAACAGTTTTACCGGCACGGTGTAATACCTGCCACATAGAATTTGAATCACAGATAAGCTACGAACGGCACACGCAGCTGCACTTCATGTCTGATAAGCAGCAGAAGGATTCTGAACTGAAGATTTTCCGATGTCAATATTGTGatagaatttttgaaaaactttgtGCCCTTTCGATGCACGTGAAGGTTCACACCAGACAACGCCAGGAGGTAAGAACTGCAACCGTAGCACCTCCCAgcaaacttaataaattttattcatgtTCAATTTGTAACGTAATGTTTCCCAACGCTAAAGAGTTGAGAACACATGTATTTTCTCAACATcccttttaa
Protein Sequence
MNKTLIKSNKPWRKPFIKINQSNKLSTMICTQCLGKINGWCYFKKTCSDNQTKLMSWLHSWETYNDNNTSIQIKDEIIEADVERDMKVISDDETLQVKIENEEPMDMHYEDPPPPLTPHLPQNFDLLADDDVDASKTNLLISFKEIPEEDTGSQNDSRVCKICDKLFSRVANRKKHERVVHGLKSKSNLVDLEDSVDNDESSQQSVVSRGSANHDSMALMVFHEVDSREIEFATTLRLQQRTPTQNTTESVSLTKSELCYIEKCKLVSKMLNTMICTCHSMGHATVKTLFKHLRDQGMYIPIFTCFICLITYTDRSTSARHRVKCTRLHSDKVLEVTKFQKQSALRIRSYQRFKCVTCKSIFTFMDDFGEHMIVEHCQGSGPFNCSCPQQFDKVDEFKEHLQTACLVHHFCDICFEIFSTLQDFRRHCEVNHDNCTGVTIFNVQQNKKGKLTASNRMLAANGSNYSTSSSAAVNRSSTSLNNSEAPYFAQPTRCTVCKKLYSSYHNMLRHFKIHDPSQKAWRCEHCHENFRLVTQLTEHLTDVHGIQDSNDSSNYKFSCPDCGELFEALEQWTEHKETHPKKKCSECEREFTLQTELDHHRSMHLNLKVHKCTKTHDYKSAVIGMLMCEICDKTFDSTSELRQHKLLHEKMPILIPVENSDDEGGKRYSKYHCSICNKDYARYSGLWNHNKKHHPGKQFQEECKYCDRILYSSNAAAMHKQMHERLTQEELVSTIRKNSPRCKRTMVAGGTDDDSESYHTCDKCFKVFASKSNLRGHMKSHGIILGLSRTQGNKMNCNVCHQVCNGFEDLEQHKREHLTEDMPELPNQVVEIEDDKMQVFTCDLCTTIFNSRIALKKHKERHDQEQNFVLSKTVFYCKFCKVSFSNEESLTVHMKDEHQVLSKLKTKTEPNKFYCSICKKVFNTMGSLSIHQGWHKRISKTSKHMKLKKKLCQKMHDKVNKSENGVQSFGCYFCSASFPTDTALQIHILEVHKNMNATVLPARCNTCHIEFESQISYERHTQLHFMSDKQQKDSELKIFRCQYCDRIFEKLCALSMHVKVHTRQRQEVRTATVAPPSKLNKFYSCSICNVMFPNAKELRTHVFSQHPF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00422988;
90% Identity
-
80% Identity
-