Dcer013113.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Dascillus cervinus
Gene Symbol
-
Assembly
GCA_949768715.1
Location
OX458319.1:1756410-1760285[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 0.0016 0.11 14.1 0.5 2 23 189 211 189 211 0.96
2 20 2.7 1.8e+02 4.0 0.4 1 20 332 351 332 353 0.89
3 20 0.5 33 6.3 0.3 1 23 382 405 382 405 0.96
4 20 0.46 30 6.4 2.7 1 19 438 456 438 461 0.89
5 20 0.036 2.4 9.9 5.2 2 23 522 543 521 543 0.97
6 20 0.063 4.1 9.1 2.8 2 23 551 573 550 573 0.91
7 20 0.052 3.4 9.4 0.1 1 23 586 608 586 608 0.97
8 20 0.011 0.72 11.5 0.8 2 23 612 633 611 633 0.97
9 20 3.8e-05 0.0025 19.3 0.3 2 23 656 677 655 677 0.95
10 20 0.0047 0.31 12.7 4.4 1 23 700 722 700 723 0.95
11 20 0.22 14 7.4 0.2 2 23 735 756 735 756 0.96
12 20 4.8e-06 0.00031 22.1 4.1 1 23 794 816 794 816 0.98
13 20 0.34 23 6.8 2.0 3 23 832 852 830 852 0.96
14 20 0.00047 0.031 15.8 1.5 1 23 875 897 875 897 0.98
15 20 0.00011 0.0074 17.8 0.6 1 23 910 933 910 933 0.96
16 20 0.00036 0.023 16.2 0.6 1 23 948 970 948 970 0.95
17 20 0.93 62 5.4 0.0 3 23 1006 1027 1004 1027 0.93
18 20 0.0036 0.24 13.0 1.8 2 23 1038 1059 1038 1059 0.97
19 20 0.0047 0.31 12.7 2.0 1 23 1074 1096 1074 1096 0.98
20 20 0.00066 0.043 15.4 0.3 1 23 1118 1141 1118 1141 0.94

Sequence Information

Coding Sequence
ATGGCAGACCGGAGTTATGGAAATTACAGCTCTTGCTGTCGATTATGTTTATCGGAGAAACTGGTCTCATTGAAGTCGATTTTCGACGCCTCCCTCGATAGCAGAGTCCTAGGACAGAAGATATTCACCTTCCTTGGGATCGAGATAAACCAATCCGATAAGTTATCCACAATGATTTGCACCCAATGTCTTGGTAAAATTAATGGATGGTtctactttaaaaaaacatgttcCGACAATCAAACCAAGCTGCTGTCATGGCTTCATTCCTGGGAGTCTTGCAATGACAATAATACGAGCATCCAAATTAAAGATGAAATCATTGATGCCGAGGATGAGCGAGACATGGAGGTTATCAGTGATGATGAGACAcGCCAAGTTAAGGTTGAAAATGAGGAACCAATGGATATGCACTACGAAGATCTTCCTCCTCCCTTAACACCTCATCCTCCTCAACATTTCGATCCGCTTTCGGATGGCGATGACGACGCTTCCAGAACCAATCTCTTGATTCCTTACAAGGAGATTCCTGAAGAAGACACTGGTTCGCAAAATGATTCTCGAGTTTGTAAGATTTGCGATAAGTTGTTCAGCAGAGTTGCGAACAGGAAGAAGCACGAAAGGGTGGTGCATggattaaaatcaaaatcaaatcTCGATTTGGATGATTCTGTTAACGATGATGACAGTTCACAACAATCGGTAGAATCTCGTGGAAGCGCCAGCCAGGACTCCATGGCTTTAATGGCTCTCCATGAAGTTGATTCtcgaaaaattgaatttgctGCGACACTCAGACTTCAACAGAGAACGCCGACCCAAAACACAACCGAAAGCTCGTCATTAACCAAATCAGAATTGTGTTACATAGAAAAATGCAAGTTGGTTTCCAAAATGTTGAATACGATGATCTGCACTTGCCACGCAATGGAGCACGTAACTGTCAAGACCCTCTTTAGACATTTGCGCGACCAGGGAATGTATATCCCAATTTTTACTTGCTTCATATGTTTAATTACATATACAGACCGATCCACAAGTGCAAGACATCGAGTTAAATGTACCAGATTGCAAAGTGATAAGATTTTGGAGGTTACCAAGTTTCAGAAGCAGTCCCCTTTAAAAATTAGGTCATATCAGAGATTCAAGTGCGTAACTTGCAAAAGCATATTTACATTCATGGACGATTTTGGTGAACACATGATTGTGGAACATTGCCAAGGTTCAGCACCATTCCGATGCTCCTGTCCTCAACAATTTGATAAAGTGGATGAATTCAAAGAACATCTCCAAACTGTTTGCTTGGTACAtcatttttgtgatatttgttttgaagtttttccAACCCTTCAAGCCTTCAGACGTCACTGCGAAGTCAACCACGATAATTGCGAGAATGTTACCATATTTAACGTCCAGCAGAATGAAAAGGGCAAATTCATCGCCAGCAATCGCATGCTTGAAGCCAATGGTTCAAATTATTCAACAAGATCGACAGCTGTTTTAAATCGTTCTTCAACTTCTTTGAACAGTTCAGAGGCTCCTTATTATGCTCAGCCGACACGTTGCACCATTTGCAAGAAGCTGTATTCATCGTATCATAATATGTTGAGGCATTTCAAAACCCACGATCCTTCCCAAAAGGCGTTGAGATGTGAGCATTGTCACGAAAAATTCCGACTTGTTACTCAGTTAAAAGAGCATTTAACTGATATACATGGAATTCAGGACACCAATGATTCGAGCAACTACAAGTTTTCTTGCCCTGATTGTGGAGATTTGTTTGAGACGTTGGAACAATGGACGGAGCACAAAGAAACTCATCCTAAGAAAAAGTGTTCCGAGTGTGAGAGAGAATTCACCTTGCAAACTGAATTGGATCAGCACAGGAGTGTGCATTTAAACCTGAAGGTTTACAGAGACACAAAAACTCAAGACTACAAAAGTGCCGTTATTGGCATGTTGATGTGTGAGATCTGCGACAAGGCTTTTGATTCGAGGAGTGAATTAAGGCAGCACAAATTACTTCATGAAAAAATGCCGATTTTAATTCCTCAAGAAGACAGCGACGACGAAGGGGACAAGAAATACAGCAAGTATCACTGTACCATCTGCAATAAAGATTATGCCAGATACAGTGGACTCTGGAATCACAATAAAAAGCATCATCCGGGAAAACACACTTCCAAACAATTCCAAGAGGAATGTAAATATTGTGATCGAATTCTGTATTCTTCAAGTGCCGCTGCCATGCACAAGCAAATGCATGAACGCTTGACCCAACAAGAATTGATGTCCagaataagaaaaaattccCCAAGATTCAAACGAACAATGGTGGCCGATGGAACAGACGATGATGATGATTCCGAATCTTACCACACTTGTGACAAGTGTTTCAAAGTTTTTGCAAGCAGAAGCAACCTCAGAAGCCACATGAAATCGCACGGAATCATGTTGGGTCTGAGCAGAACACGgggaaataaaatattctgtaACGTTTGCCACCAAGTGTGCAACGGTTTCGAAGAGCTGGAGGAACACAAAAGGGAACATTTGACTGAAGACATGCCAGAACTTCCTAATCAAGTCGTCGAGGTTGAAGATGATAAGATGCAGGTTTTCACTTGCGACCTGTGcactaaaatattcaattcgaGGATCGCTTTGAAGAAACATAAAGAACGTCACGAGCAGGAACAAAACTTTGTGCTGAACAAGACGGTGTTCTATTGCAAATATTGCAAGGTATCGTTTAGTAACGAAAAGGGTTTAGCCATCCACATGAAAGAAGAGCACCAAGTTTTGCCGAAATTAAAGGCTAAAACGGAACAAACCAAGTTCTACTGTTCAATTTGCAAGAAGGTGTTTAATACCATGGGATCGCTTTCAACTCATCAAGGTTGGCACAAGAGAACTTCAAAAACGTCTAAACATATGAAATTGCAGGAGAAATTGTACCAAAAAATGCAAGATAAAGCCAACAAATCTGAGCATGGAGTGCAAAATTTCGGTTGTTACTCTTGTTCGGCTTCATTTCCGACCGACACTGCTTTGCAGATTCACATTTTGGAAGTTCATAGGAATATTAATGCAACGGTTTTACCGGCACGTTGTAATACCTGCCACATAGAATTTGAATCGCAGATAAGCTACGAACGGCACATGCAGCTGCACTTCATGTCTGATAAGCAGCAGAAGGATTCTGGACTGAAGATTTTCCGATGTCAATATTGTGATaggatttttgaaaaactttgtGCCCTTTCGATGCACGTGAAGGTTCACACCAGACAACGCCAGGAGGTAAGAACTGCAACCGTAGCGCCTCCCAGCAaacctaataaattttattcatgtTCAATTTGTAACGTAATGTTTCCCAACGCTAAAGAGTTGAGAACACATGTATTTTCTCAACATCccttttaa
Protein Sequence
MADRSYGNYSSCCRLCLSEKLVSLKSIFDASLDSRVLGQKIFTFLGIEINQSDKLSTMICTQCLGKINGWFYFKKTCSDNQTKLLSWLHSWESCNDNNTSIQIKDEIIDAEDERDMEVISDDETRQVKVENEEPMDMHYEDLPPPLTPHPPQHFDPLSDGDDDASRTNLLIPYKEIPEEDTGSQNDSRVCKICDKLFSRVANRKKHERVVHGLKSKSNLDLDDSVNDDDSSQQSVESRGSASQDSMALMALHEVDSRKIEFAATLRLQQRTPTQNTTESSSLTKSELCYIEKCKLVSKMLNTMICTCHAMEHVTVKTLFRHLRDQGMYIPIFTCFICLITYTDRSTSARHRVKCTRLQSDKILEVTKFQKQSPLKIRSYQRFKCVTCKSIFTFMDDFGEHMIVEHCQGSAPFRCSCPQQFDKVDEFKEHLQTVCLVHHFCDICFEVFPTLQAFRRHCEVNHDNCENVTIFNVQQNEKGKFIASNRMLEANGSNYSTRSTAVLNRSSTSLNSSEAPYYAQPTRCTICKKLYSSYHNMLRHFKTHDPSQKALRCEHCHEKFRLVTQLKEHLTDIHGIQDTNDSSNYKFSCPDCGDLFETLEQWTEHKETHPKKKCSECEREFTLQTELDQHRSVHLNLKVYRDTKTQDYKSAVIGMLMCEICDKAFDSRSELRQHKLLHEKMPILIPQEDSDDEGDKKYSKYHCTICNKDYARYSGLWNHNKKHHPGKHTSKQFQEECKYCDRILYSSSAAAMHKQMHERLTQQELMSRIRKNSPRFKRTMVADGTDDDDDSESYHTCDKCFKVFASRSNLRSHMKSHGIMLGLSRTRGNKIFCNVCHQVCNGFEELEEHKREHLTEDMPELPNQVVEVEDDKMQVFTCDLCTKIFNSRIALKKHKERHEQEQNFVLNKTVFYCKYCKVSFSNEKGLAIHMKEEHQVLPKLKAKTEQTKFYCSICKKVFNTMGSLSTHQGWHKRTSKTSKHMKLQEKLYQKMQDKANKSEHGVQNFGCYSCSASFPTDTALQIHILEVHRNINATVLPARCNTCHIEFESQISYERHMQLHFMSDKQQKDSGLKIFRCQYCDRIFEKLCALSMHVKVHTRQRQEVRTATVAPPSKPNKFYSCSICNVMFPNAKELRTHVFSQHPF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00422990;
90% Identity
-
80% Identity
-