Dcer021749.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Dascillus cervinus
Gene Symbol
-
Assembly
GCA_949768715.1
Location
OX458320.1:26783018-26790471[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 3.8e-07 2.5e-05 25.6 1.8 1 23 114 137 114 137 0.97
2 16 4.9e-07 3.2e-05 25.2 1.3 1 23 143 165 143 165 0.98
3 16 0.0032 0.21 13.2 5.7 1 23 206 229 206 229 0.97
4 16 1.7e-07 1.1e-05 26.7 1.1 1 23 235 257 235 257 0.99
5 16 5.4e-06 0.00036 21.9 2.6 1 23 298 321 298 321 0.97
6 16 1.7e-07 1.1e-05 26.7 1.1 1 23 327 349 327 349 0.99
7 16 5.4e-06 0.00036 21.9 2.6 1 23 390 413 390 413 0.97
8 16 1.7e-07 1.1e-05 26.7 1.1 1 23 419 441 419 441 0.99
9 16 5.4e-06 0.00036 21.9 2.6 1 23 482 505 482 505 0.97
10 16 1.7e-07 1.1e-05 26.7 1.1 1 23 511 533 511 533 0.99
11 16 5.4e-06 0.00036 21.9 2.6 1 23 574 597 574 597 0.97
12 16 1.7e-07 1.1e-05 26.7 1.1 1 23 603 625 603 625 0.99
13 16 5.4e-06 0.00036 21.9 2.6 1 23 666 689 666 689 0.97
14 16 0.00068 0.045 15.3 1.2 1 23 810 833 810 833 0.96
15 16 1.4e-06 9.2e-05 23.8 3.3 2 23 959 981 958 981 0.96
16 16 0.00058 0.038 15.5 1.5 1 23 987 1009 987 1009 0.99

Sequence Information

Coding Sequence
ATGAGTAATTGGGATCGAATTAAACTGGAAGTAGAGGAATTCATCATCAAAGATGAGCCTGTTGATACGGTGGACGAATTGGAGGAAGAAGGTCATGAAACTGGTGAAGATGATGAAACAACTAATATTATCTCCGATTCGCATTGTTTTGATGAAAGTCagTTTAAGAAAGTAGAATTTGAGATTTTTGATACAACCAACATAAAAACTGAAGAATTTGATCAAAGTGAACAACAGGAATTTCAAGCAGAGTGCAGTTTATCTTACGGGTGGAAAATCGACCAGCAGTTCAAAGACGAGGACAGCAGTAGCTTACAGGAACAGGGAAGTGGAACTGAATTTCAATGTAAAATATGTCTGAAAGTCTTTACCAGAAAGCAAAATCTCAAACGACACATTAATTCAGTTCACGAAGGGAAGAAAGAATTCAAGTGCACAGTATGTGGAAGAGGTTTTGTTAGAAAGGACAAACTGAAACGACACTTGAAAATTCACGTTGAAAGTGAACAGCAGGAATTTCAAGCAGCATGCAGTTCTTCTTATGGGCAGGAAATCGACCAGCAGCCCAAAGCCGAGGACCGCAGTAACTTACTGGAACAGGGAAGTGGAACTCAATTTCACTGTAAACAATGTCTGAAAGTCTTTGCCCAGAAACAATGTCTCAAGCAACATATTAAGTCAGTTCATGAAGGGAAGAAAGAATTTAAGTGCACAGTATGTGGAAGAGGTTTTGTGAGGAACGACAAACTGAAACGACACATGAAAATTCATGTTGAAAGTGAACATCAGAAATTTCAAGCGGCGTGCCGTTCCTCTCACAGGAAGGAAATCGACCAGCAGCCCAAAACCGAGGACAGCAATAACTTACAGGAACAGGGAAGTGGAAATCAATTTCAATGTAAACAATGTCTGAAAGTCTTTACCAGAAAACAAACTCTCAAACGACACATTAATTCAGTTCACGAAGGGAAGAAAGAATTTAAGTGCACAGTATGTGGAAGAGGTTTTGTGAGGAACGACAAACTGAAACGACACATGAAAATTCATGTTGAAAGTGAACATCAGAAATTTCAAGCGGCGTGCCGTTCCTCTCACAGGAAGGAAATCGACCAGCAGCCCAAAACCGAGGACAGCAATAACTTACAGGAACAGGGAAGTGGAAATCAATTTCAATGTAAACAATGTCTGAAAGTCTTTACCAGAAAACAAACTCTCAAACGACACATTAATTCAGTTCACGAAGGGAAGAAAGAATTTAAGTGCACAGTATGTGGAAGAGGTTTTGTGAGGAACGACAAACTGAAACGACACATGAAAATTCATGTTGAAAGTGAACATCAGAAATTTCAAGCGGCGTGCCGTTCCTCTCACAGGAAGGAAATCGACCAGCAGCCCAAAACCGAGGACAGCAATAACTTACAGGAACAGGGAAGTGGAAATCAATTTCAATGTAAACAATGTCTGAAAGTCTTTACCAGAAAACAAACTCTCAAACGACACATTAATTCAGTTCACGAAGGGAAGAAAGAATTTAAGTGCACAGTATGTGGAAGAGGTTTTGTGAGGAACGACAAACTGAAACGACACATGAAAATTCATGTTGAAAGTGAACATCAGAAATTTCAAGCGGCGTGCCGTTCCTCTCACAGGAAGGAAATCGACCAGCAGCCCAAAACCGAGGACAGCAATAACTTACAGGAACAGGGAAGTGGAAATCAATTTCAATGTAAACAATGTCTGAAAGTCTTTACCAGAAAACAAACTCTCAAACGACACATTAATTCAGTTCACGAAGGGAAGAAAGAATTTAAGTGCACAGTATGTGGAAGAGGTTTTGTGAGGAACGACAAACTGAAACGACACATGAAAATTCATGTTGAAAGTGAACATCAGAAATTTCAAGCGGCGTGCCGTTCCTCTCACAGGAAGGAAATCGACCAGCAGCCCAAAACCGAGGACAGCAATAACTTACAGGAACAGGGAAGTGGAAATCAATTTCAATGTAAACAATGTCTGAAAGTCTTTACCAGAAAACAAACTCTCAAACGACACATTAATTCAGTTCACGAAGGGAAGAAACAATTCAAtgaaatgactaattgggaccgaatTAAACTGGAAGTTGAGGAATTCATCATCAAAGATGAGCCAGTTGATACGTTGGAGAAATTGGAGGAAGAAGAAAGTCATGAAACTAGTGAAGAAGATAAAACAATTAACTCCGATTCTCATTGTTTTGACGAATGTCagGTGGAGGGATTAGAAGTTGAAATTCTTGATACAACCAACATCAAAACTGAAGAAGTTGACGAAAGTGAACAACAGGAATTTCAAGCAGCGTCCAGTTCTTCTTATGAACAGGAAATCGACCAGCAGCCCAAAGATGAGGACAGCAGTAGCTTACAGGAACAGGGAGGTGGTCCTCACTTTCAATGTAAACAATGTCTGAAAGTTTTCGCCAAGGAACCATATCTCAAACGACATACTAAATTAGTTCACGAAGGAAAGACACAATTCAAGTGCACAGAAGATTTAAGATGGATCAAAATTAAACTGGAACCAGAAGAGCTGATCATCAAAGATGAGCCTGATGATACGGTGGAAGAATTGATGGCCCAAGAAAATCATGAATCTGTCGAAGAAGATAAAACACTTAATTTTAGCTCCGATTCTCATTGTTTCGTGAGTAGTCAGaTCAAAATGGAAGGATCGGAAGATGTGATTACTGATGAAATCAAGATCAAAACTGAAGAAATTGATGGAGATGAACATAAGGAACTTCAGGAAGCGTGCAGTTCAACCGGTGATTGGAAGATCGACCAACAACCAAAATATAAAGACAAGAGCAGCTTACGGACAGAGGGAAGTGGAATTCAATGTGAACACTGTACGAAAGCATTTTCCACGAAAGATCATCTCAACCGACATATTAATTCAGTTCACGAAGGGAAGAAACAATTCAAGTGCACAGTATGTGGAAGAGGTTTTATGTGGAAGGATGACCTGAAACATCACGTGAATACTCATAGAGGATCCAAGTGCACAATCAAAGTCGACTCGGTCATAAACAGCCCAGAAGAACTGACCACCATGATCACGTGTTACGTCAACCTATGCAGACTGCCTAAAAGTGTGCTCAAACACTTGGGCAACGACGACCCCAAAGCTCTCAATCCATAA
Protein Sequence
MSNWDRIKLEVEEFIIKDEPVDTVDELEEEGHETGEDDETTNIISDSHCFDESQFKKVEFEIFDTTNIKTEEFDQSEQQEFQAECSLSYGWKIDQQFKDEDSSSLQEQGSGTEFQCKICLKVFTRKQNLKRHINSVHEGKKEFKCTVCGRGFVRKDKLKRHLKIHVESEQQEFQAACSSSYGQEIDQQPKAEDRSNLLEQGSGTQFHCKQCLKVFAQKQCLKQHIKSVHEGKKEFKCTVCGRGFVRNDKLKRHMKIHVESEHQKFQAACRSSHRKEIDQQPKTEDSNNLQEQGSGNQFQCKQCLKVFTRKQTLKRHINSVHEGKKEFKCTVCGRGFVRNDKLKRHMKIHVESEHQKFQAACRSSHRKEIDQQPKTEDSNNLQEQGSGNQFQCKQCLKVFTRKQTLKRHINSVHEGKKEFKCTVCGRGFVRNDKLKRHMKIHVESEHQKFQAACRSSHRKEIDQQPKTEDSNNLQEQGSGNQFQCKQCLKVFTRKQTLKRHINSVHEGKKEFKCTVCGRGFVRNDKLKRHMKIHVESEHQKFQAACRSSHRKEIDQQPKTEDSNNLQEQGSGNQFQCKQCLKVFTRKQTLKRHINSVHEGKKEFKCTVCGRGFVRNDKLKRHMKIHVESEHQKFQAACRSSHRKEIDQQPKTEDSNNLQEQGSGNQFQCKQCLKVFTRKQTLKRHINSVHEGKKQFNEMTNWDRIKLEVEEFIIKDEPVDTLEKLEEEESHETSEEDKTINSDSHCFDECQVEGLEVEILDTTNIKTEEVDESEQQEFQAASSSSYEQEIDQQPKDEDSSSLQEQGGGPHFQCKQCLKVFAKEPYLKRHTKLVHEGKTQFKCTEDLRWIKIKLEPEELIIKDEPDDTVEELMAQENHESVEEDKTLNFSSDSHCFVSSQIKMEGSEDVITDEIKIKTEEIDGDEHKELQEACSSTGDWKIDQQPKYKDKSSLRTEGSGIQCEHCTKAFSTKDHLNRHINSVHEGKKQFKCTVCGRGFMWKDDLKHHVNTHRGSKCTIKVDSVINSPEELTTMITCYVNLCRLPKSVLKHLGNDDPKALNP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00422831;
90% Identity
iTF_00422831;
80% Identity
iTF_00422831;