Basic Information

Insect: Dascillus cervinus
Gene Symbol: -
Assembly: GCA_949768715.1
Location: OX458320.1:26430537-26434037[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 2.4e-05 0.0016 19.9 0.6 2 23 139 160 138 160 0.97

2 20 5.8e-06 0.00038 21.8 3.8 1 23 174 196 174 196 0.98

3 20 1.6e-06 0.0001 23.6 0.7 1 23 202 224 202 224 0.98

4 20 1.4e-06 9.1e-05 23.8 0.9 1 23 230 252 230 252 0.98

5 20 1e-06 6.7e-05 24.2 0.5 1 23 258 280 258 280 0.98

6 20 5.2e-06 0.00035 22.0 1.3 1 23 286 308 286 308 0.98

7 20 9.1e-05 0.006 18.1 1.4 1 23 314 336 314 336 0.97

8 20 7e-07 4.6e-05 24.7 0.5 3 23 344 364 343 364 0.96

9 20 1.2e-06 7.9e-05 24.0 1.0 1 23 370 392 370 392 0.98

10 20 1.8e-05 0.0012 20.3 2.0 1 23 398 420 398 420 0.98

11 20 0.00011 0.0074 17.8 3.3 1 23 426 448 426 448 0.98

12 20 5.1e-05 0.0034 18.9 1.1 1 23 454 475 454 475 0.98

13 20 8.7e-07 5.7e-05 24.4 0.4 1 23 481 503 481 503 0.99

14 20 6e-06 0.0004 21.8 0.8 1 23 509 531 509 531 0.98

15 20 1.6e-05 0.0011 20.4 4.7 2 23 538 559 537 559 0.96

16 20 0.00014 0.0091 17.5 3.5 1 23 565 587 565 587 0.98

17 20 7.2e-05 0.0048 18.4 0.1 1 23 593 615 593 615 0.98

18 20 1.6e-05 0.0011 20.4 2.4 1 23 621 643 621 643 0.98

19 20 0.00029 0.019 16.5 0.8 1 23 649 671 649 671 0.98

20 20 3.9e-05 0.0026 19.2 4.2 1 23 677 699 677 699 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	2.4e-05	0.0016	19.9	0.6	2	23	139	160	138	160	0.97
2	20	5.8e-06	0.00038	21.8	3.8	1	23	174	196	174	196	0.98
3	20	1.6e-06	0.0001	23.6	0.7	1	23	202	224	202	224	0.98
4	20	1.4e-06	9.1e-05	23.8	0.9	1	23	230	252	230	252	0.98
5	20	1e-06	6.7e-05	24.2	0.5	1	23	258	280	258	280	0.98
6	20	5.2e-06	0.00035	22.0	1.3	1	23	286	308	286	308	0.98
7	20	9.1e-05	0.006	18.1	1.4	1	23	314	336	314	336	0.97
8	20	7e-07	4.6e-05	24.7	0.5	3	23	344	364	343	364	0.96
9	20	1.2e-06	7.9e-05	24.0	1.0	1	23	370	392	370	392	0.98
10	20	1.8e-05	0.0012	20.3	2.0	1	23	398	420	398	420	0.98
11	20	0.00011	0.0074	17.8	3.3	1	23	426	448	426	448	0.98
12	20	5.1e-05	0.0034	18.9	1.1	1	23	454	475	454	475	0.98
13	20	8.7e-07	5.7e-05	24.4	0.4	1	23	481	503	481	503	0.99
14	20	6e-06	0.0004	21.8	0.8	1	23	509	531	509	531	0.98
15	20	1.6e-05	0.0011	20.4	4.7	2	23	538	559	537	559	0.96
16	20	0.00014	0.0091	17.5	3.5	1	23	565	587	565	587	0.98
17	20	7.2e-05	0.0048	18.4	0.1	1	23	593	615	593	615	0.98
18	20	1.6e-05	0.0011	20.4	2.4	1	23	621	643	621	643	0.98
19	20	0.00029	0.019	16.5	0.8	1	23	649	671	649	671	0.98
20	20	3.9e-05	0.0026	19.2	4.2	1	23	677	699	677	699	0.98

Sequence Information

Coding Sequence: ATGAAGGGGCTGGATATCCTTTGGAACGGACTGGATGAGCTGGAGGCACCAACGAGGTTGGATGAACTGGAGTTAAAGATGGAGCCTTACGATTCAGTTAAACTCAAAATTGAAGAACTGGTTGTAAAAGATGAATACGCAACAGCTGTCGAAGAAGACGATTTCGAATCCAACCCCAAATTTCCTGCAGTTTGCACTGATGATTTTACCGTTGCAAAGGTCAAAGCCGAACCCTCACAAAATTCGAACGAATTCAGTTATGAACTGCAAACTAACCTAAAAGAAGAAGGTTGGAATGAAGAACCTATCAACCAACCCTCCTTTTCCAACTGCAACcaagaagaaattaaaatagaaaacTGTGAACTAAATTTCGATTCACCACTTACATCGTTCCTGGAAGTAACCAAACAAGAATGCGGTGAGTGCGGAAACTGTTTCTCTGATAATTACCAACTTGAAGAGCACTTGCTAACCCACACGTTTGAGTGCCCCAAAACAGTTGCAGGCGATGGACCATTTAAATGCAACCAATGCAACAAAGTTTGCTCGCTAAAAAGCAACCTAAAACAGCACATGTTGGTTCACACGAAAGAGAAACCCTTCAAATGCGATTTGTGCAGTAAAGCGTTCAATCAAAGCGGGAATCTTAAAATGCACATGTCAGTGCACACGGGccagaaaccttttaaatgcaatTTGTGCAATAAAGCCTTCACTCAAAAGGGCAGTCTCAAATTGCACTTGCTTGTCCATAAAGGGGAGCAACCCTTCAAATGCGGCGAGTGTGACAAGGGTTTTACGACAAAGGGAAATCTAAAGCTGCACACGTTGATTCATTCCGACGAGAAACCCTTCAAATGCCAACTGTGTAATAAAGCTTTTGTCCACAACAGTGCCCTCAAAAACCACGTTTTAGTCCACGAGGGCACGAAGCCTTTCAAGTGCCATTTATGCGATAAAACTTTCACCCTCATTCGGAGTCTCAATGTGCACATATTAGCCCATACAGGCGAGAAACCTAATATGTGCAATGTGTGCAATAAAGGTTTCACAGACGCGAGCAATCTCAACCGACATATGTTCATACATTCGGGcgagagacctttcaaatgtgGACAGTGTGACAAGGCCTTTATAACAAAGCGCAATCTAAAAGAACACATGTATATTCATAATGGGGAGAGAACCTTTCAGTGCAATGTGtgcaataaaagtttcaaacaaACTCGCAGCCTCAATGAACACAAATTGATCCACAAGGATGAAAAAACGTTCAAATGCCATTTGTGTGATCAAGGCTTCAATCATAACAACAGCCTCAGAATTCACTTGTTGGTCCATAAAGGCGAGAAACCTTTTAAGTGCAATGTGTGCAACAAGGCTTTTACTCAAAATGTGCTCAAACGGCACATGTTGGTTCACAGTGGAGAGAAGCCTTTTAAATGTGAAGTTTGCAACAAAGCCTTCACCGGAAAAGGCAACCTAGGTAAACACATGTTGACCCACACGGGCGAAAAACCCTACAAATGCAATGTGTGTGACAAGACTTTTCAACAAAACCGCAGTCTCAGTGTGCACTTGTTGGTTCATAAGGGCGAGAAACCTTGCATATGCCACGTGTGCGGGAAAACGTTCACGCACGCCATCTACCTCAAAACGCACATGTTAGTTCATCAAGCggaaaaaatcttcaaatgtGACCAGTGTGATAGGGGTTTTACTCGAAGGCACGTCTTCAGAAGACACCTGTTGGTCCATGAAGGAGAGAAAACCTTCCAATGTGCCATGTGTGATAAAGCGTTTGTGCTCGACAGCCAACTCAAGAGACATGTGTTGGTTCACAGTGATGAGAGACCGTTTAAGTGCCACTTGTGTGATAAGGCGTTTAGAGAAACTCGTACTCTGAAAGCGCACATGTCTGTTCATACCGGCGAGAAACCCTATACATGCAATGTGTGCAATAACATTTTCACGGCAAAACGCAGTCTCAGATTGCACATGTTGTCCCATAAGGACAAGAAACCTTTTAAGTGCCACTTGTGTGATAAAGGTTACACGCAAAAGAAGAGACTCAAAACTCACATGTTGGTTCATAAGGATGAAGAATCgtttgagtgcaaagatgaGCCGATTTTATAA
Protein Sequence: MKGLDILWNGLDELEAPTRLDELELKMEPYDSVKLKIEELVVKDEYATAVEEDDFESNPKFPAVCTDDFTVAKVKAEPSQNSNEFSYELQTNLKEEGWNEEPINQPSFSNCNQEEIKIENCELNFDSPLTSFLEVTKQECGECGNCFSDNYQLEEHLLTHTFECPKTVAGDGPFKCNQCNKVCSLKSNLKQHMLVHTKEKPFKCDLCSKAFNQSGNLKMHMSVHTGQKPFKCNLCNKAFTQKGSLKLHLLVHKGEQPFKCGECDKGFTTKGNLKLHTLIHSDEKPFKCQLCNKAFVHNSALKNHVLVHEGTKPFKCHLCDKTFTLIRSLNVHILAHTGEKPNMCNVCNKGFTDASNLNRHMFIHSGERPFKCGQCDKAFITKRNLKEHMYIHNGERTFQCNVCNKSFKQTRSLNEHKLIHKDEKTFKCHLCDQGFNHNNSLRIHLLVHKGEKPFKCNVCNKAFTQNVLKRHMLVHSGEKPFKCEVCNKAFTGKGNLGKHMLTHTGEKPYKCNVCDKTFQQNRSLSVHLLVHKGEKPCICHVCGKTFTHAIYLKTHMLVHQAEKIFKCDQCDRGFTRRHVFRRHLLVHEGEKTFQCAMCDKAFVLDSQLKRHVLVHSDERPFKCHLCDKAFRETRTLKAHMSVHTGEKPYTCNVCNNIFTAKRSLRLHMLSHKDKKPFKCHLCDKGYTQKKRLKTHMLVHKDEESFECKDEPIL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00423408;
90% Identity: iTF_00423408;
80% Identity: iTF_00423408;