Basic Information

Insect: Dascillus cervinus
Gene Symbol: -
Assembly: GCA_949768715.1
Location: OX458320.1:26425593-26429798[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 24 3.6e-05 0.0023 19.4 0.2 2 23 122 143 121 143 0.97

2 24 2.5e-07 1.7e-05 26.1 1.0 1 23 168 190 168 190 0.98

3 24 1.9e-07 1.2e-05 26.5 0.7 1 23 196 218 196 218 0.98

4 24 8.1e-05 0.0053 18.2 4.1 1 23 224 246 224 246 0.98

5 24 3.3e-06 0.00022 22.6 2.0 1 23 252 274 252 274 0.98

6 24 0.00042 0.027 16.0 4.5 1 23 280 302 280 302 0.98

7 24 5.8e-06 0.00038 21.8 2.8 1 23 308 330 308 330 0.98

8 24 1.5e-07 9.8e-06 26.8 1.7 1 23 336 358 336 358 0.98

9 24 0.00065 0.043 15.4 2.1 1 23 364 386 364 386 0.98

10 24 0.00054 0.036 15.6 1.2 1 23 392 414 392 414 0.97

11 24 0.00016 0.011 17.3 1.5 1 23 420 442 420 442 0.98

12 24 3.1e-08 2.1e-06 29.0 1.6 1 23 448 470 448 470 0.98

13 24 0.00079 0.052 15.1 1.2 1 23 476 498 476 498 0.97

14 24 6.5e-06 0.00043 21.7 2.3 1 23 504 526 504 526 0.98

15 24 3.2e-05 0.0021 19.5 1.2 1 23 532 554 532 554 0.98

16 24 0.00023 0.016 16.8 1.2 1 23 560 581 560 581 0.98

17 24 1e-06 6.7e-05 24.2 0.2 1 23 587 609 587 609 0.98

18 24 2e-05 0.0013 20.1 1.7 1 23 615 637 615 637 0.98

19 24 2.3e-05 0.0015 19.9 4.2 2 23 644 665 643 665 0.95

20 24 6.6e-05 0.0044 18.5 1.9 1 23 671 693 671 693 0.97

21 24 0.0058 0.38 12.4 0.8 1 23 699 721 699 721 0.98

22 24 2.1e-05 0.0014 20.1 2.1 1 23 727 749 727 749 0.98

23 24 8e-05 0.0053 18.2 2.7 1 23 755 777 755 777 0.98

24 24 9.4e-06 0.00062 21.2 1.1 1 23 783 805 783 805 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	24	3.6e-05	0.0023	19.4	0.2	2	23	122	143	121	143	0.97
2	24	2.5e-07	1.7e-05	26.1	1.0	1	23	168	190	168	190	0.98
3	24	1.9e-07	1.2e-05	26.5	0.7	1	23	196	218	196	218	0.98
4	24	8.1e-05	0.0053	18.2	4.1	1	23	224	246	224	246	0.98
5	24	3.3e-06	0.00022	22.6	2.0	1	23	252	274	252	274	0.98
6	24	0.00042	0.027	16.0	4.5	1	23	280	302	280	302	0.98
7	24	5.8e-06	0.00038	21.8	2.8	1	23	308	330	308	330	0.98
8	24	1.5e-07	9.8e-06	26.8	1.7	1	23	336	358	336	358	0.98
9	24	0.00065	0.043	15.4	2.1	1	23	364	386	364	386	0.98
10	24	0.00054	0.036	15.6	1.2	1	23	392	414	392	414	0.97
11	24	0.00016	0.011	17.3	1.5	1	23	420	442	420	442	0.98
12	24	3.1e-08	2.1e-06	29.0	1.6	1	23	448	470	448	470	0.98
13	24	0.00079	0.052	15.1	1.2	1	23	476	498	476	498	0.97
14	24	6.5e-06	0.00043	21.7	2.3	1	23	504	526	504	526	0.98
15	24	3.2e-05	0.0021	19.5	1.2	1	23	532	554	532	554	0.98
16	24	0.00023	0.016	16.8	1.2	1	23	560	581	560	581	0.98
17	24	1e-06	6.7e-05	24.2	0.2	1	23	587	609	587	609	0.98
18	24	2e-05	0.0013	20.1	1.7	1	23	615	637	615	637	0.98
19	24	2.3e-05	0.0015	19.9	4.2	2	23	644	665	643	665	0.95
20	24	6.6e-05	0.0044	18.5	1.9	1	23	671	693	671	693	0.97
21	24	0.0058	0.38	12.4	0.8	1	23	699	721	699	721	0.98
22	24	2.1e-05	0.0014	20.1	2.1	1	23	727	749	727	749	0.98
23	24	8e-05	0.0053	18.2	2.7	1	23	755	777	755	777	0.98
24	24	9.4e-06	0.00062	21.2	1.1	1	23	783	805	783	805	0.98

Sequence Information

Coding Sequence: ATGGATAATTGTGATTCAGTTCAATTCAAACCTGAAGGGGAAGCTGTCATTATAAAAGATGAATTTGATACTGCtgaaaattttgttgcaatttttgaaGAGGATCTTGCCATTAAAGCACAggTCAAAACTGAACCATCTCAATACAATGATGAATTCAATAATCTTTCCGATGACACAGTTACACCAACAATAAGCAATTATGAATTCCAGGCGAATTTAAAACAAGAAGATTGGAGGGAAGATTACATCGGCCAACATCCTTTCACTACGACCTCAAACCAAgacgaaattaaaatcgaaaagTGCGAACTAAACTTCGACTTAATTTCACCAGACGAGTTTCTCAAAGTAGCAAAGCTCGAGTGTGGCGAATGTGGAAGCTGTTTCGCCGACAATGACCAACTTGAAGAACATCTACGAATCCACACTCTTGACAGGCCAAAACGCAACCGAAAAACAAAGGTCAAAACAGATATGGTTGCTTATGAAGGCAGGCCCTTTAAATGCGACGTTTGCAATAAAGCCTTCACTCAAAGTGGCAATCTCAAAACGCACATGTTCGTTCATAAGGCagaaaaaaacttcaaatgcAATGAGTGCAATAAAGCTTTCGCGCAAAAGGCCAACCTTAAATATCACATGTTGGTACATAAAGGAGAGACTCCGTTTAAATGCACCGAGTGCAATAAAGGTTTCACGGCCAAGTGCAATCTCAACTTGCACATGTTCACTCACACCGGTGAGAAACCTTTCAAGTGCCAACTGTGCAATAAATCTTTCGTCCATAACGGCGCCCTCAAAAGCCACATGTCAGTTCACGAGCGCAAGATGGCCTTCAAGTGCCACTTATGTGATAAAAGGTTCACCTTTAATAGCAGTCTCAAATTCCACATTTTGGTTCATAAAGGCGAgaaaccctttaaatgcaaCGAGTGCAATAAAGCTTTTATTCATAAGCGCAATCTCAACTATCATCTGTTGGTTCATAAAGGAGAGACACCGTTTAAATGCCATGAGTGCGGTAAGGGTTTTATAACGAAGAGCAACTTGAAAGTGCACGTTTTGAGTCATACCGGCGATAAACCCTTTAAGTGCCAACTGTGCGACAAACAATTTATCCATAAAATCGCTTTCAGCAATCACTTGTTGGTGCATGAGGGCAAAAAGCCTTTCGCGTGCCACTTGTGTGACAAAACTTTCACCATCGGCAAGAGCCTGCAGACGCACTTATTGGTTCACGAGGGCAATAAGCCCTTCAAGTGCCACTTGTGTGATAAAGCATTTTTCCTCAGTAAGAGTCTCGAAATCCACTTATTGGTTCATAAAGGAGAAAATCCCTTTAAATGCAACGTGTGCAAGCGAGCTTTCACAAACAGCAGCAATCTCAGGCGACACATGTTGGTGCATAAGGGCGAAAAACCCTTCCAATGCAATGTGTGTGCTAAGAGTTTTTTAACAAAGCGCAATCTCAAAGAACACTTGTACATTCATAACGACGAAGGGACCTTTAAGTGCGATGTGTGCAATAAAACCTTCAAACAAAAGCGCAGCCTCAACGAGCACAAGTTGATCCACAATGACGAAAAGGCCTTCAAATGCGACTTGTGCGATCAAGCGTTCAACCACAGCAACAGTCTCAAAATACACTTGTTGGTCCACAAAGGGGAGAAACCGTTTAAGTGTCAAGTGTGCAATAAAGGGTTCACTCAAAACGTGCTCAAAAGGCACATGTTGGTCCACAGTGGAGAGAGGCCCTTTAAATGCGACGTTTGCGGCAAAGGCTTCACCGGGAAGGGCAATCTCGACAAACACATGTTGATCCACACGGGCGAAAAGCCCCACAAGTGCACCGTATGCGACAAAGCGTTTCAACAGAAGCGCAGCCTGACCGTGCATTTGCTGGTCCACAAGGGCGAGAAACCCTGCATATGCCACGTGTGCGGAAAAGCGTTCACGCACGCCATCCACCTCAAAGCGCACATGGTGGTTCACGACGGCGAGAAAACCTTTAAATGCGACCAGTGTGATAAAGGTTTTACCCGAAAGCACATCTTGAAGGCGCACATGTTGGGACACGAAGGCGAGAAAGCCTTCAAGTGCAACCTTTGTGATAAAGCGTTCCTTTTTGTGAACCGCCTCAATAGGCACATGTTAGTGCACAACGACGAGCGACCCTTCAAGTGCCACTTGTGCGAGAAAGCGTTCAGAGAAGCTCGCACCCTTAAAACGCACATGTTGGTTCATACCggcgaaaaaccgcacgaaTGCAATGTGTGTAATAACACCTTCACGGCAAAAAGCAGTCTATATAAACACATGTTGACACACAAGGAggagaaaccttttaaatgtcaattgtGTGATAAAGGTTACACACAAAAGAAGAGCCTTAAAATTCACATGGTGGTTCATAACGGCGAAGAATCGTTTAAATGCAAAGAGGAGCCCATGCTATAA
Protein Sequence: MDNCDSVQFKPEGEAVIIKDEFDTAENFVAIFEEDLAIKAQVKTEPSQYNDEFNNLSDDTVTPTISNYEFQANLKQEDWREDYIGQHPFTTTSNQDEIKIEKCELNFDLISPDEFLKVAKLECGECGSCFADNDQLEEHLRIHTLDRPKRNRKTKVKTDMVAYEGRPFKCDVCNKAFTQSGNLKTHMFVHKAEKNFKCNECNKAFAQKANLKYHMLVHKGETPFKCTECNKGFTAKCNLNLHMFTHTGEKPFKCQLCNKSFVHNGALKSHMSVHERKMAFKCHLCDKRFTFNSSLKFHILVHKGEKPFKCNECNKAFIHKRNLNYHLLVHKGETPFKCHECGKGFITKSNLKVHVLSHTGDKPFKCQLCDKQFIHKIAFSNHLLVHEGKKPFACHLCDKTFTIGKSLQTHLLVHEGNKPFKCHLCDKAFFLSKSLEIHLLVHKGENPFKCNVCKRAFTNSSNLRRHMLVHKGEKPFQCNVCAKSFLTKRNLKEHLYIHNDEGTFKCDVCNKTFKQKRSLNEHKLIHNDEKAFKCDLCDQAFNHSNSLKIHLLVHKGEKPFKCQVCNKGFTQNVLKRHMLVHSGERPFKCDVCGKGFTGKGNLDKHMLIHTGEKPHKCTVCDKAFQQKRSLTVHLLVHKGEKPCICHVCGKAFTHAIHLKAHMVVHDGEKTFKCDQCDKGFTRKHILKAHMLGHEGEKAFKCNLCDKAFLFVNRLNRHMLVHNDERPFKCHLCEKAFREARTLKTHMLVHTGEKPHECNVCNNTFTAKSSLYKHMLTHKEEKPFKCQLCDKGYTQKKSLKIHMVVHNGEESFKCKEEPML

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00423407;
90% Identity: iTF_00423407;
80% Identity: iTF_00423407;