Basic Information

Insect: Danaus plexippus
Gene Symbol: stc
Assembly: GCA_018135715.1
Location: CM030913.1:4447240-4455377[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 3 2.2e+04 -4.3 1.6 15 19 478 482 477 482 0.81

2 14 0.098 7.3e+02 0.6 1.7 2 10 510 518 510 518 0.92

3 14 5.5e-05 0.4 11.0 18.1 4 19 526 541 524 541 0.93

4 14 4e-05 0.29 11.5 13.6 1 18 577 594 577 595 0.97

5 14 1.4 1e+04 -3.1 0.3 8 11 600 603 599 603 0.86

6 14 7.7e-05 0.57 10.6 12.5 1 19 635 653 635 653 0.99

7 14 0.00014 1.1 9.7 12.2 1 19 694 716 694 716 0.88

8 14 3 2.2e+04 -4.7 1.7 6 10 746 750 746 750 0.95

9 14 0.33 2.5e+03 -1.1 11.2 1 12 756 767 756 767 0.93

10 14 0.076 5.6e+02 1.0 0.4 4 10 771 777 770 778 0.93

11 14 5.5e-06 0.04 14.2 14.0 3 19 785 801 783 801 0.92

12 14 0.055 4.1e+02 1.4 17.2 1 18 840 856 840 857 0.81

13 14 8.1e-09 6e-05 23.3 9.2 1 18 893 912 893 917 0.88

14 14 0.04 2.9e+02 1.9 12.4 1 19 923 946 923 946 0.85

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	3	2.2e+04	-4.3	1.6	15	19	478	482	477	482	0.81
2	14	0.098	7.3e+02	0.6	1.7	2	10	510	518	510	518	0.92
3	14	5.5e-05	0.4	11.0	18.1	4	19	526	541	524	541	0.93
4	14	4e-05	0.29	11.5	13.6	1	18	577	594	577	595	0.97
5	14	1.4	1e+04	-3.1	0.3	8	11	600	603	599	603	0.86
6	14	7.7e-05	0.57	10.6	12.5	1	19	635	653	635	653	0.99
7	14	0.00014	1.1	9.7	12.2	1	19	694	716	694	716	0.88
8	14	3	2.2e+04	-4.7	1.7	6	10	746	750	746	750	0.95
9	14	0.33	2.5e+03	-1.1	11.2	1	12	756	767	756	767	0.93
10	14	0.076	5.6e+02	1.0	0.4	4	10	771	777	770	778	0.93
11	14	5.5e-06	0.04	14.2	14.0	3	19	785	801	783	801	0.92
12	14	0.055	4.1e+02	1.4	17.2	1	18	840	856	840	857	0.81
13	14	8.1e-09	6e-05	23.3	9.2	1	18	893	912	893	917	0.88
14	14	0.04	2.9e+02	1.9	12.4	1	19	923	946	923	946	0.85

Sequence Information

Coding Sequence: ATGTCTCAGTGGAATAATTCTTACTCCTACAATAATCAGTACCACACACCTAATAATTGGAATGGGGACTATAACAACCAATATCAGGCATACTATCCAAACGCTCAATATAATGCGAACCAATATGTAAGCTTCGATGAATTTTTATCCCAAATGCACATTTCCAACCCTCAAACAAACCCATATAATACTCAATATCCAAACTATCCCAATAGTCAGTATGCACAGTTACCTAATTATCAAAATGATTCACCCAACCAAAACTCTCAAGCTGTGTATAATTATGAAACTAGTTCAAGCAATTATAATTACAACAATGAAACATACCAGGGGAATACAGAAGAACAGATTCAGCAAACATCAATAGATCAACAATTACCAAGAGAAGTTGTGAAATCCAAACTCATGCCCACTGCCACTGAGTTTGTCCCTAAGCAATCTAGCACTAGTAATAAAGAACAACATTCAAGCAATACAAATAGAAATGCAGGTGATAGTAACAATTCCAAGCCATCAGGTTCAACAAACTGGAGAGAAAGACCGCAGAACTCAAAGAATTCTTTTACTTCAGAATCTAGCAACTTTTACCAAAAAAATGTGAAACCTCAAGAATTAAATAACCGCCATAACAAATATGATTCAAAATACCGCAATCAAGATAATCAAAATACCAATGGTGAAAGTAGTGGCCAAAATTCTGCAAACCCTGTGCACAAAGATCGTCCAAGTGATGCTAATAATCGCAAAGGCAAATCTAAGAGCAGACCCTTTGAAAACAACCAAAATTTGGAACCTAGTTTCCGCAACCAATATAATCAAGGCTACAATAACCAGTCAAAACCTAAAAACCGTACTTACAATGGCTGTAATCATGAATCTAACCACAACGAAGATATAAACGATATCAGTTCAGCATCCGAATTACCTGAAAATTCTAACAGTGACGAAGGGGGCCAATCAAAAAGTAATTCTAAGTTTAAAAGCAAAGACTCTGACCCAAGTCGGACTTTTTATAACAGTGGAATGCCAAAAGAAAGCCAAGATGTAAGAAATGGTAGAAGTGAAGGGTCAGGAAGGAATCGTAGGTGGATAGGAAGTCAAAGGTTAAAAGGTGCGGAAAGAGATATTTATGATGATGAACAGTATGCAAAGTCTTATTTCCATGCCAAAGAAGAAAGAAATAGGGATAATCTATCAAGTCCGGCCAAAGGGAAGAGTAAAAACTTGTCTAACCCGGGAGCTAACATAGATATGACACAACGTGAGCGCTTAAGCGACCAACTAGACAGGGGCACCCTTGAGTGTCTTGTATGCTGCGAGAGAGTTAAACAAACTGATCCAGTATGGTATTGCGGTAACTGTTATCATGTATTGCATCTTCGTTGCATAAGGAAATGGGCTATAAGTAGCATGATTGAAACGAAATGGCGATGTCCAGCATGCCAAAATGTGAATCAAGACATACCAACCGAGTATAGATGTATGTGTGGTGCGGTCAGGAATCCAGAATACCAGAGGGGATCGAGTGGTGCTCATACATGTGGCAAGTCCTGTAAGAGAATGAGGCTCTGCCCTCATCCATGCACACTATTGTGCCACCCTGGACCATGCCCTCCGTGCCAGGCCACTATAAGCAAGCAATGCGGCTGTGGGGCGGAGACGCGTTCAGTTCTATGTAGTAGTAAATTACCGCAAGTCTGTGGAAGAGTGTGTAATAAAAAATTAGAATGCGGGGTTCATTCATGCACTAAACAGTGCCATGAAGAACAGTGCGACCCCTGCGAGGAAATTGTCACACAAGTGTGTCACTGCCCCGCGGCCAAGTCTCGCTCCGTGGCGTGCACGTCACACACGGACCGCACCAGCTGGTCCTGCGGCGAGCAGTGCGGGCGTGTGTTGTCATGCGGAGCGCACGTGTGTCGCGCGACCTGCCACGCCCCGCCCTGCCCTGCGTGTCCCCTCACACCCGACAACGTGCCGGCCTGTCCGTGTGGCAAGACTAGGATCAATAAAGATCAGCGCAAGACTTGCGTGGACCCCATACCGCTCTGTGGCAACATTTGTGCTAAGCCTCTACCGTGCGGGCCGGCGGGCGACAAGCATATATGTAAAGAGAGCTGTCACGAAGGTGGTTGCCGCGTCTGTCCCGACACAACTCTGCTGCAGTGCCGTTGCGGTCACTCGAGCCAAGAGGTGCCGTGTGCTGATCTGCCGCAGATGATCAACAACGTATTGTGTCAGAGAAAATGTAACAAGAAGTTGTCATGCGGCCGTCACCGCTGTCATACCCGGTGCTGTGACTCTGCCACTCATCGCTGCGCCGTCGTCTGCGGCCGTTCTCTCTCATGTCAGCTCCACAGATGTGAGGAGTTCTGTCACACTGGACACTGCGCGCCCTGTCCGAGAGTCAGTTTCGACGAGCTCCATTGTGAGTGTGGCGCGGAGGTGCTGATGCCGCCGGTCCGCTGCGGCACCAAACCACCCGCCTGCAGCGCCCCCTGCCGCAGGAGCAGACCCTGCGGTCACCCGCCGCACCACTCGTGCCACTCCGGCGATTGCCCGCCATGCGTCGTGCTTACAACTAAAATGTGTTACGGAAAACATGAAGAACGGAAAACAATACCGTGTTCTCAAGAAGAATTCTCCTGCGGCCTGCCGTGCGGGAAACCTCTTCCTTGCGGTAAACACACTTGTATCAAAATATGTCACAAGGGATCTTGTGATATAAGCACATGTAGTCAACCCTGCACATCCAAACGGCCGAGTTGTGGTCACCCGTGTGCTGCGAGGTGTCACTCTAGCGGCGGGGGCTCCTGTCCCAGTGCGGCGCCCTGTCGCCGGCCAGTACGAGCCACCTGCCAGTGTGGACGAAAACAAACAGAGCGATCTTGCTGCGATAACGCCAGGGACTATGCCAAGATGATGAGTACCCTAGCGGCAACGAAAATGCAAGAGGGTGGCACTGTGGATATATCAGATGTTCAACGACCCGGATCAATGCTCAAAACATTGGAGTGTGACGAGGAGTGCTTCGTAGAGGCTCGGAGCCGTCGCCTGGCTTTGGCACTTCAGCTGCGAAATCCTGACGTATCGGCCAAGCTCGCGCCTCGATATAGCGATCATCTACGAACAACGGCCGCCAGGGAACCAACCTTCGCACAACAAATACACGACAAGCTGACGGAACTCGTCCAATTAGCCAAAAAGTCCAAACAGAAGACGAGAGCACATTCATTCCCATCTATGAACCGCCAAAAGCGTCAGTTCATCCACGAGCTGTGCGAACATTTCGGATGCGAAAGTGTTGCGTATGACGCTGAACCTAACAGAAACGTCGTTGCTACAGCCGACAAGGAAAAGTCTTGGCTGCCGGCTATGAGTGTACTGGAGGTGTTATCCCGAGAGGCTGGTAAGAGACGTGTACCCGGGCCGGTACTACGAGCGCCCGCCGCCGCCCTACCACCAACAAAGGAAATACCATCCACCACCTCAAAGTCCTCATCGGGTGGCTGGGCAACGCTGACATCTACTAACGCGTGGGCGGCCCGCAGTCAGCCCAAGAAGGAAGAAACCAAAATTGACTATTTCGATAACCCTCCAGAGTAA
Protein Sequence: MSQWNNSYSYNNQYHTPNNWNGDYNNQYQAYYPNAQYNANQYVSFDEFLSQMHISNPQTNPYNTQYPNYPNSQYAQLPNYQNDSPNQNSQAVYNYETSSSNYNYNNETYQGNTEEQIQQTSIDQQLPREVVKSKLMPTATEFVPKQSSTSNKEQHSSNTNRNAGDSNNSKPSGSTNWRERPQNSKNSFTSESSNFYQKNVKPQELNNRHNKYDSKYRNQDNQNTNGESSGQNSANPVHKDRPSDANNRKGKSKSRPFENNQNLEPSFRNQYNQGYNNQSKPKNRTYNGCNHESNHNEDINDISSASELPENSNSDEGGQSKSNSKFKSKDSDPSRTFYNSGMPKESQDVRNGRSEGSGRNRRWIGSQRLKGAERDIYDDEQYAKSYFHAKEERNRDNLSSPAKGKSKNLSNPGANIDMTQRERLSDQLDRGTLECLVCCERVKQTDPVWYCGNCYHVLHLRCIRKWAISSMIETKWRCPACQNVNQDIPTEYRCMCGAVRNPEYQRGSSGAHTCGKSCKRMRLCPHPCTLLCHPGPCPPCQATISKQCGCGAETRSVLCSSKLPQVCGRVCNKKLECGVHSCTKQCHEEQCDPCEEIVTQVCHCPAAKSRSVACTSHTDRTSWSCGEQCGRVLSCGAHVCRATCHAPPCPACPLTPDNVPACPCGKTRINKDQRKTCVDPIPLCGNICAKPLPCGPAGDKHICKESCHEGGCRVCPDTTLLQCRCGHSSQEVPCADLPQMINNVLCQRKCNKKLSCGRHRCHTRCCDSATHRCAVVCGRSLSCQLHRCEEFCHTGHCAPCPRVSFDELHCECGAEVLMPPVRCGTKPPACSAPCRRSRPCGHPPHHSCHSGDCPPCVVLTTKMCYGKHEERKTIPCSQEEFSCGLPCGKPLPCGKHTCIKICHKGSCDISTCSQPCTSKRPSCGHPCAARCHSSGGGSCPSAAPCRRPVRATCQCGRKQTERSCCDNARDYAKMMSTLAATKMQEGGTVDISDVQRPGSMLKTLECDEECFVEARSRRLALALQLRNPDVSAKLAPRYSDHLRTTAAREPTFAQQIHDKLTELVQLAKKSKQKTRAHSFPSMNRQKRQFIHELCEHFGCESVAYDAEPNRNVVATADKEKSWLPAMSVLEVLSREAGKRRVPGPVLRAPAAALPPTKEIPSTTSKSSSGGWATLTSTNAWAARSQPKKEETKIDYFDNPPE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00419474;
90% Identity: iTF_00419474;
80% Identity: -