Basic Information

Insect: Danaus chrysippus
Gene Symbol: stc
Assembly: GCA_004959915.1
Location: RPCZ01000008.1:3437903-3449896[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2 2.1e+04 -4.3 1.6 15 19 478 482 477 482 0.81

2 14 0.065 6.7e+02 0.6 1.7 2 10 510 518 510 518 0.92

3 14 3.6e-05 0.37 11.0 18.1 4 19 526 541 524 541 0.93

4 14 2.1e-05 0.22 11.8 13.7 1 19 577 595 577 595 0.98

5 14 0.93 9.6e+03 -3.0 0.3 8 11 600 603 599 603 0.86

6 14 5.1e-05 0.53 10.6 12.5 1 19 635 653 635 653 0.99

7 14 9.4e-05 0.98 9.7 12.8 1 19 689 711 689 711 0.88

8 14 2 2.1e+04 -4.7 1.7 6 10 741 745 741 745 0.95

9 14 0.22 2.3e+03 -1.1 11.2 1 12 751 762 751 762 0.93

10 14 0.033 3.4e+02 1.6 0.3 3 10 765 772 764 773 0.92

11 14 3.6e-06 0.037 14.2 14.0 3 19 780 796 778 796 0.92

12 14 0.036 3.8e+02 1.4 17.2 1 18 835 851 835 852 0.81

13 14 7.9e-09 8.2e-05 22.7 9.6 1 18 888 907 888 912 0.87

14 14 0.018 1.9e+02 2.4 13.2 1 19 918 941 918 941 0.85

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2	2.1e+04	-4.3	1.6	15	19	478	482	477	482	0.81
2	14	0.065	6.7e+02	0.6	1.7	2	10	510	518	510	518	0.92
3	14	3.6e-05	0.37	11.0	18.1	4	19	526	541	524	541	0.93
4	14	2.1e-05	0.22	11.8	13.7	1	19	577	595	577	595	0.98
5	14	0.93	9.6e+03	-3.0	0.3	8	11	600	603	599	603	0.86
6	14	5.1e-05	0.53	10.6	12.5	1	19	635	653	635	653	0.99
7	14	9.4e-05	0.98	9.7	12.8	1	19	689	711	689	711	0.88
8	14	2	2.1e+04	-4.7	1.7	6	10	741	745	741	745	0.95
9	14	0.22	2.3e+03	-1.1	11.2	1	12	751	762	751	762	0.93
10	14	0.033	3.4e+02	1.6	0.3	3	10	765	772	764	773	0.92
11	14	3.6e-06	0.037	14.2	14.0	3	19	780	796	778	796	0.92
12	14	0.036	3.8e+02	1.4	17.2	1	18	835	851	835	852	0.81
13	14	7.9e-09	8.2e-05	22.7	9.6	1	18	888	907	888	912	0.87
14	14	0.018	1.9e+02	2.4	13.2	1	19	918	941	918	941	0.85

Sequence Information

Coding Sequence: ATGTCTCAGTGGAATAATTCTTACTCGTACAATAATCAGTACCACACACCTAATAATTGGAATGGGGACTATAATAACCAATATCAGGCATACTATCCAAACGCTCAATATAATGCCAACCAATACGTAAGCTTCGACGAATTTTTATCCCAAATGCACATTTCCAACCCTCAAACAAATCCATATAATACTCAGTATCAAAACTATCCTAATAGTCAGTATGCACAGTTACctaattatcaaaatgattCACCCAACCAAAACTCTCAACCTGtgtataattatgaaactagttcaaacaattataattacaataatgaaaCATACCAGGGGAATACAGAAGAACAGGTTCAGCAGACATCAGTAGATCAACAATTACCTAGAGAAGTTGTGAAATCAAAACTCATGCCCACAGCCACTGAATTTGTCCCTAAGCAATCTAgcagtaataataaagaacaatattcaaacaatacaaatagAAATCCAAGTGAAAGTAACAATTCCAAGCCATCGGGTTCAACAAACTGGAGGGAAAGACCGCAGAACTCAAAGAATTCTTTTAATTCAGAATCTAGCAACTTTTACCAAAAAAACATTAGACCTCAAGAAGTAAATAACCGCCATAACAAATATGATTCAAAAAACCGCAATCAAGAAAATCAAAATACCAATGGTGAAAGTAGCAGCCAAAATTCTGCAAACACTGTGCATAAAGATCGTCAAAATGATGCTAACAATCGCAAGGGCAAGTCTAAAAGCAGACCTTTTGAAAACAACCAAAACTCAGAACCCAGTTTCCGCAACCATTATAACCAAGGCTACAACAACCAGTCAAAATCTAAAAATCGTACTTACAATGGTTGCAACCATGACTCTAACCACAACGAAGAAGTCAATGATATCAATTCAGCATCAGAATTACCTGAAAATTCTAACAGCGACGAAGGGGGCCAATCAAAAAGTAATTCTAAGTTTAAAAGCAAAGACTCTGACCCAAGTCGGACTTTTTATAACAGTGGGATGCCAAAAGAAAGCCAAGATGTCAGAAACGGTAGAAATGAAGGGTCGGGAAGGAATCGTAGATGGGTTGGAACTCAAAGGTTAAAAGGTGCCGAAAGAGATAGTTATGAGGATGAACAATATGCAAAGTCTTATTTTCATGGCAAAGAAGAAAGAAATAGGGATAATATATCAAGTCCGGCCAAAGGAAAGAGTAAAAACTTGGCTAACCCGGGAGCTAACATAGATATGACACAACGTGAGCGTTTAAGTGATCAACTCGACAGAGGCACTCTTGAATGTCTTGTATGTTGTGAGAGAGTTAAACAAACTGATCCAGTATGGTATTGCGGTAACTGTTATCATGTGTTGCACCTTCGCTGTATAAGGAAGTGGGCTATAAGTAGTATGATTGAAACGAAATGGCGATGTCCAGCATGTCAGAATGTGAATCAAGACATACCAACCGAGTACAGATGTATGTGCGGGGCCGTCAGGAATCCTGAATATCAGAGGGGTTCGAGTGGGGCTCATACATGCGGCAAGTCCTGTAAGAGAATGAGACTTTGCCCTCATCCATGCACACTATTGTGCCACCCTGGACCATGTCCCCCTTGCCAGGCTACTATTAGCAAGCAATGCGGCTGTGGGACAGAGACTCGTTCAGTTCTGTGTAGTAGTAAATTACCGCAAGTCTGTGGAAGagtgtgtaataaaaaattagaatGCGGGGTTCATTCATGCACTAAACAGTGCCATGAAGAACAATGCGACCCCTGCAAGGAAATTGTCACAcaagTGTGCCACTGCCCCGCGGCCAAGTCCCGCTCCGTAGCGTGCACGTCACACACGGACCGCGCCAACTGGTCTTGCGGCGAGCAGTGCGGACGCGTGTTGTCGTGCGGGGCGCACGTGTGTCGCGCGACCTGCCACGCCCCGCCCTGCCCCGCGTGTCCGCTCACACCGGACAACGTACCGGCCTGTCCGATCAATAAAGATCAACGCAAGACTTGCACAGACCCCATACCTCTCTGTGGTAACATTTGTGCTAAACCTTTACCATGCGGACCTGCGGGCGACAAGCATATATGTAAAGAAAGCTGCCACGAAGGTGGTTGCCGCACATGTCCCGACACAACGCTGCTGCAGTGCCGCTGCGGTCACTCCAGTCAAGAGGTGCCGTGTGCTGATCTGCCGCAGATGATCAACAACGTGTTGTGTCAGAGGAAATGTAACAAGAAGCTGTCGTGCGGCCGTCACCGTTGCCACACCCGGTGCTGCGACTCGTCCTCTCACCGCTGCGCCGTGGTCTGCGGCCGGTCACTCTCGTGTCAGCTGCACAGGTGTGAGGAGTTCTGTCACACCGGACACTGCGCGCCCTGTCCGAGAGTCAGTTTCGACGAGCTCCGTTGTGAGTGTGGCGCGGAGGTGTTGTTGCCGCCGGTCCGCTGCGGCACCAAGCCCCCCGCCTGCAGCGCCCCCTGCCGCAGGAGCCGACCCTGCGGTCACCCGCCACACCACTCCTGCCACTCCGGTGATTGCCCGCCATGCGTCGTGCTCACTACTAAAATGTGTTACGGGAAACATGAAgAACGGAAAACAATACCGTGTTCTCAAGAAGAATTCTCCTGCGGCCTGCCGTGCGGGAAACCTCTTCCTTGCGGTAAACACActtgtatcaaaatatgtcACAAGGGATCTTGTGATATAAGCACATGTACTCAGCCGTGTACATCCAAACGTCCTAGTTGTGGTCACCCGTGTGCCGCCAAGTGTCACTCTAGCGGCGGGGGCTCCTGTCCCAGTACGGCGCCCTGTCGCCGACCTGTCCGAGCGACCTGCCAGTGTGGGAGAAAACAGACGGAGCGGGCCTGCTGTGATAACGCCAGGGACTATGCCAAgaTGATGAGTACTCTAGCAGCAACGAAAATGCAAGAAGGTGGCACTGTGGATATATCAGAAGTTCAACGACCTGCATCAATGCTTAAAACATTGGAGTGTGATGAGGAATGCTTCGTAGAGGCTCGGAGCCGTCGCCTCGCTCTGGCGCTTCAGCTGCGTAATCCTGATGTATCAGCCAAGCTCGCGCCCCGATACAGTGATCATCTACGAACAACGGCCGCTAGAGAACCGAGCTTCGCACAACAAATACATGACAAGCTGACCGAACTTGTACAACTAGCTAAAAAgtCCAAGCAGAAGACGAGAGCTCATTCATTCCCGTCCATGAACCGCCAGAAGCGCCAGTTCATTCACGAGCTGTGCGAACATTTCGGATGCGAGAGTGTTGCGTATGACGCTGAACCTAACAGAAACGTCGTTGCTACAGCCGACAAGGAAAAGTCTTGGCTGCCCGCTATGAGTGTACTAGAGGTGTTATCTCGCGAGGCTGGTAAGAGACGTGTTCCGGGGCCGGTACTGCGAGCGCCCGCCGCCCCCCTACCACACACTAAGGAACCACCTTCCACTACCACAAAgTCTTCATCGAGTGGCTGGGCAACACTCACATCAACTAACGCGTGGGCTGCCCGCAGTCAACCCAAGAAGGAAGAAACCAAAATCGACTATTTCGATAACCCTCCAGAATAA
Protein Sequence: MSQWNNSYSYNNQYHTPNNWNGDYNNQYQAYYPNAQYNANQYVSFDEFLSQMHISNPQTNPYNTQYQNYPNSQYAQLPNYQNDSPNQNSQPVYNYETSSNNYNYNNETYQGNTEEQVQQTSVDQQLPREVVKSKLMPTATEFVPKQSSSNNKEQYSNNTNRNPSESNNSKPSGSTNWRERPQNSKNSFNSESSNFYQKNIRPQEVNNRHNKYDSKNRNQENQNTNGESSSQNSANTVHKDRQNDANNRKGKSKSRPFENNQNSEPSFRNHYNQGYNNQSKSKNRTYNGCNHDSNHNEEVNDINSASELPENSNSDEGGQSKSNSKFKSKDSDPSRTFYNSGMPKESQDVRNGRNEGSGRNRRWVGTQRLKGAERDSYEDEQYAKSYFHGKEERNRDNISSPAKGKSKNLANPGANIDMTQRERLSDQLDRGTLECLVCCERVKQTDPVWYCGNCYHVLHLRCIRKWAISSMIETKWRCPACQNVNQDIPTEYRCMCGAVRNPEYQRGSSGAHTCGKSCKRMRLCPHPCTLLCHPGPCPPCQATISKQCGCGTETRSVLCSSKLPQVCGRVCNKKLECGVHSCTKQCHEEQCDPCKEIVTQVCHCPAAKSRSVACTSHTDRANWSCGEQCGRVLSCGAHVCRATCHAPPCPACPLTPDNVPACPINKDQRKTCTDPIPLCGNICAKPLPCGPAGDKHICKESCHEGGCRTCPDTTLLQCRCGHSSQEVPCADLPQMINNVLCQRKCNKKLSCGRHRCHTRCCDSSSHRCAVVCGRSLSCQLHRCEEFCHTGHCAPCPRVSFDELRCECGAEVLLPPVRCGTKPPACSAPCRRSRPCGHPPHHSCHSGDCPPCVVLTTKMCYGKHEERKTIPCSQEEFSCGLPCGKPLPCGKHTCIKICHKGSCDISTCTQPCTSKRPSCGHPCAAKCHSSGGGSCPSTAPCRRPVRATCQCGRKQTERACCDNARDYAKMMSTLAATKMQEGGTVDISEVQRPASMLKTLECDEECFVEARSRRLALALQLRNPDVSAKLAPRYSDHLRTTAAREPSFAQQIHDKLTELVQLAKKSKQKTRAHSFPSMNRQKRQFIHELCEHFGCESVAYDAEPNRNVVATADKEKSWLPAMSVLEVLSREAGKRRVPGPVLRAPAAPLPHTKEPPSTTTKSSSSGWATLTSTNAWAARSQPKKEETKIDYFDNPPE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00421871;
90% Identity: iTF_00421871;
80% Identity: -