Basic Information

Insect: Danaus plexippus
Gene Symbol: -
Assembly: GCA_018135715.1
Location: JAEQBL010000005.1:1502601-1517870[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.005 0.35 11.7 0.1 2 23 129 151 128 151 0.96

2 19 8.6 6e+02 1.5 0.7 1 23 198 221 198 221 0.83

3 19 0.0084 0.59 11.0 0.3 2 23 384 406 383 406 0.96

4 19 8.8 6.2e+02 1.5 2.6 1 21 414 434 414 435 0.94

5 19 0.016 1.1 10.1 1.4 2 23 445 466 444 466 0.93

6 19 0.88 61 4.6 0.4 1 23 482 505 482 505 0.85

7 19 0.026 1.8 9.5 1.0 1 23 514 537 514 537 0.93

8 19 0.44 30 5.6 1.1 6 23 585 603 579 603 0.95

9 19 0.12 8.3 7.4 1.6 2 23 622 644 621 644 0.91

10 19 2.2 1.5e+02 3.4 2.1 1 23 649 672 649 672 0.93

11 19 3.2e-05 0.0022 18.6 1.9 1 23 678 700 678 700 0.97

12 19 2.2e-05 0.0015 19.1 1.2 1 23 707 729 707 729 0.98

13 19 8.2e-05 0.0057 17.3 2.3 1 23 734 756 734 756 0.96

14 19 0.00083 0.058 14.2 3.7 1 23 762 784 762 784 0.99

15 19 1.4e-06 9.8e-05 22.9 1.2 1 23 790 812 790 812 0.98

16 19 0.00068 0.047 14.4 2.3 2 23 819 840 819 840 0.97

17 19 0.00053 0.037 14.8 0.3 2 23 848 870 847 870 0.97

18 19 0.0017 0.12 13.2 1.0 1 23 875 897 875 897 0.98

19 19 0.0031 0.22 12.4 3.3 1 23 903 926 903 926 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.005	0.35	11.7	0.1	2	23	129	151	128	151	0.96
2	19	8.6	6e+02	1.5	0.7	1	23	198	221	198	221	0.83
3	19	0.0084	0.59	11.0	0.3	2	23	384	406	383	406	0.96
4	19	8.8	6.2e+02	1.5	2.6	1	21	414	434	414	435	0.94
5	19	0.016	1.1	10.1	1.4	2	23	445	466	444	466	0.93
6	19	0.88	61	4.6	0.4	1	23	482	505	482	505	0.85
7	19	0.026	1.8	9.5	1.0	1	23	514	537	514	537	0.93
8	19	0.44	30	5.6	1.1	6	23	585	603	579	603	0.95
9	19	0.12	8.3	7.4	1.6	2	23	622	644	621	644	0.91
10	19	2.2	1.5e+02	3.4	2.1	1	23	649	672	649	672	0.93
11	19	3.2e-05	0.0022	18.6	1.9	1	23	678	700	678	700	0.97
12	19	2.2e-05	0.0015	19.1	1.2	1	23	707	729	707	729	0.98
13	19	8.2e-05	0.0057	17.3	2.3	1	23	734	756	734	756	0.96
14	19	0.00083	0.058	14.2	3.7	1	23	762	784	762	784	0.99
15	19	1.4e-06	9.8e-05	22.9	1.2	1	23	790	812	790	812	0.98
16	19	0.00068	0.047	14.4	2.3	2	23	819	840	819	840	0.97
17	19	0.00053	0.037	14.8	0.3	2	23	848	870	847	870	0.97
18	19	0.0017	0.12	13.2	1.0	1	23	875	897	875	897	0.98
19	19	0.0031	0.22	12.4	3.3	1	23	903	926	903	926	0.98

Sequence Information

Coding Sequence: ATGTCATCCGATGAATCAGATGATGAATCCCTAGCATTCTTAGCGGCCTCAAAAAGAATTAAGGTGGAAGAAGATGAATTGTTAAATAAAGGAAATGAAGAACCTTCCACAAAAAAGGTTAAAGCCACAAAGAAAACTGATCGTAAACTTAACGTTGGCGCTCCAAATGTTATAGAAAGACCTGCGGATGTATGGCTGTACCTTAAAGATTTGAAACCCTCAGGCCCTTACAGCTGCTTACTGTGTGATGATTGGTTTATTAATCGATCTAAAATGATTTTGCATTACGCAGTAAATCACAAAAAAGATTTTTGTGGTATATGCAGATACTTCGTACCAAATAGACAGGCCTGGTATGCACATGAGAAATTTCATTCACCCTGGCCATGTTCACAATGTGTAGAAACTTTTACCTCGGAGCTAATGTTGAGAGAACATCTTAATACTGCACATAATCTGGTCCACTGTAGATTGTGCCACTTCAGAGTGTCTGCTGATTTCAATTACAACTCACATTTATTTGAAAAGCACAATGTCACTAATGTATCTTCCAAAAATGAGGATGTCTTATGGAAAGTAGAAGGTGGTACGTTTCAATGTTTACTCTGCTCTAAATCAGAAAATACACTATCAACTTTCTTTGGACACTTTATGGGTATTCATCATTTAACTTTAAAGTGCCTCACATCAGTTATAGCCGGCAGAGACACACCTTTCACAGTGAAAGGGGCTGATGTTAGTGAAAAATTTATTAATGAGCAACTCAAAAGCCATGTTCGATTAGGTTATGTAGACTGGGAAACAAAAGATGATAAAACAATGAATGAATTCAAAAAAGAAAAGGATTTGGAAAATAGTTTGACCAAAGTAGAACAAAGTGCATCTGTGAGAGAAATAAAAGAAGAAGTAATTAGTGATGAAGAAGAATTAGTTGAGAAAGAAAATGAGGTTAATCAGAAAGATGAGCCTTCAAGCAGTTATTATAAATGGGCTGAGGATTTTGACATTACATACATGGAAATTATAATAGTCCATAAATCATATTATGACTATGTCGACACGTCCCTCAGGGATATCAATTCAAATTTAATGCCAGAGAAATCGTATTTGAATTACGAAAGAATGAAAGCAGAAATATATATGGATGTTGAATGCGGATTTTGTAAAACGAACTTTGACACAGCACAGTCTTTTGTTGAACATATGAATAAAATTCACAGTGTTAAATCAGTACCCTTATATTCTTGTAGAGTGTGTTGCGAGACGTTTGATAATTATTTAGATTTATGTACACATGTTAACGAGGAGCTGGCAGACTTTGAGGATCTTTGGATTTGTCAGTTTTGTGACAAGGAGTTTGATAACCGTGAAGAGACGAGACATCATCTGACCGAGCATTGGACTGCTTTGGACTATGATAACTGTTTTAGTCCGCATTTAGGTTTTAAATGCAAATACTGTCCGACATTATTCTGGAACGAACCGGACAGAGAGACTCATCAAATTAGAGTGCATTTAGATAAATACAAACATCAGTTCTACAAGTGCGAAAAATGTGATATGGAATTCGGCGATAAGGTCTGGTATGTATACCATCATTTAGAAAACCATCAAAACCCAAATGCAGTAACTAACTATATCCTAAAGTGTAACATCTGTTGTTCGGTGATGGCAACCATTGAGGAGATGAGGAATCACTTTGCAAGAAACCATCTCGAGTTCAAGAAAGTCTACTGTAACATAGATCCTTGCTGTTATAAGCCATTGAATCACCAGAGGTCTCTAAAAATACATATTAAGATGGCGCACAGGATAACAGATTTACCCAAAACTCCGAGAGTGCCAAAAGCTAAAAAGAAGGTGTCATGCAACATGTGCAATCGTAAGTTCAACAACGCTCGTGCTTGCAGCACACACATGGCACAGGTGCATGGACCTGGGAAGTTCAAATGCAAACTGTGCCGCGAGGTGCTGCAGACTGCTGATGAAAGGAAGCTCCACTACCTCCTGTGCCACCCTGGTCGGCATCCATTCGAGTGTACTGAGTGCGGAAAATCATTTCAATACAAATCATCACTGTACATGCACAAACAGGAACACATGCCGAATAAACAGAGCTACACCTGCAGTTACTGCAGTAAGGTTTTCGCGAAGAAGGATTCGTATCGTGAACACGTCCAGATACACGAAGGTCCTCGCCACGCGTGCTCGTACTGTCCGATGAGGTTCGTCCAACGTTCCAACATGTTGAGGCACGAACGACGGCACACAGGCGAGAGACCTTACAGGTGTCCTCATTGCACGAGGACCTTCGCTGATAAAGGGGCCTGCACTTCACATGCTAGGACACATTCGAAAGACTCGTCCTATGCCTGCGTGTACTGCGGTCAGACGTTCGTACAGAAGTCGAAACTCACGTACCATATCAGGAAACACACGGGAGAAAATTTGGAGTCGTGTTCCGTCTGTTCGAAGCTGTTCACCAGCGCGTGCTCGCTGCGGGAACACATGAAAATACACGTGGAGAAGAAGAAGATCGTCAAGTGTCCTCTATGCGACAAGGGCTATCAGGACGAGCGTTACATGCTGCGTCACCTCCGCACGCTACATTCCCGTTCACAGTTCTCATGTCCGTTGTGCCACAAGCTTCTCTCCAGCGCTGCAGGTCTCCGTCACCACGTCATAACGCACAGCTGCGTCAACACTTTCCAGTGTAAATCCTGCACAAAATCCTACGCAGTGAAAAGGACCATGTTGAAGCATTTAAGGAAGCGGCACGGCTTAACGGGCAACGAGTTAAATATAAAGGATTACTACACTAGATTAGAACCACGCGAGTGTCAATTGGATCTAGACGAGACAACGATGACCAGTATATTCGGACCTCCCAAGAAGAAATCGACGGACATATTGTTCGGTGATTTCGTAACTTTGGCTAAGAAAATCAATGGACCAGAAGAAAAGAAACGAGATGGAGATAGTAGTAGCGATGAGCCGGTTACAAGGATTAAGCAAGAGGTCCAGAACCAAACTGAAATAGAAATAGAACCAACAGATTTCGTCAGTGTTAAGATTGAAAGTGTGGACGCTGGTTATACAGAGTGA
Protein Sequence: MSSDESDDESLAFLAASKRIKVEEDELLNKGNEEPSTKKVKATKKTDRKLNVGAPNVIERPADVWLYLKDLKPSGPYSCLLCDDWFINRSKMILHYAVNHKKDFCGICRYFVPNRQAWYAHEKFHSPWPCSQCVETFTSELMLREHLNTAHNLVHCRLCHFRVSADFNYNSHLFEKHNVTNVSSKNEDVLWKVEGGTFQCLLCSKSENTLSTFFGHFMGIHHLTLKCLTSVIAGRDTPFTVKGADVSEKFINEQLKSHVRLGYVDWETKDDKTMNEFKKEKDLENSLTKVEQSASVREIKEEVISDEEELVEKENEVNQKDEPSSSYYKWAEDFDITYMEIIIVHKSYYDYVDTSLRDINSNLMPEKSYLNYERMKAEIYMDVECGFCKTNFDTAQSFVEHMNKIHSVKSVPLYSCRVCCETFDNYLDLCTHVNEELADFEDLWICQFCDKEFDNREETRHHLTEHWTALDYDNCFSPHLGFKCKYCPTLFWNEPDRETHQIRVHLDKYKHQFYKCEKCDMEFGDKVWYVYHHLENHQNPNAVTNYILKCNICCSVMATIEEMRNHFARNHLEFKKVYCNIDPCCYKPLNHQRSLKIHIKMAHRITDLPKTPRVPKAKKKVSCNMCNRKFNNARACSTHMAQVHGPGKFKCKLCREVLQTADERKLHYLLCHPGRHPFECTECGKSFQYKSSLYMHKQEHMPNKQSYTCSYCSKVFAKKDSYREHVQIHEGPRHACSYCPMRFVQRSNMLRHERRHTGERPYRCPHCTRTFADKGACTSHARTHSKDSSYACVYCGQTFVQKSKLTYHIRKHTGENLESCSVCSKLFTSACSLREHMKIHVEKKKIVKCPLCDKGYQDERYMLRHLRTLHSRSQFSCPLCHKLLSSAAGLRHHVITHSCVNTFQCKSCTKSYAVKRTMLKHLRKRHGLTGNELNIKDYYTRLEPRECQLDLDETTMTSIFGPPKKKSTDILFGDFVTLAKKINGPEEKKRDGDSSSDEPVTRIKQEVQNQTEIEIEPTDFVSVKIESVDAGYTE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00419272; iTF_00420778; iTF_00419968;
90% Identity: iTF_00419272;
80% Identity: -