Dple004057.1
Basic Information
- Insect
- Danaus plexippus
- Gene Symbol
- -
- Assembly
- GCA_018135715.1
- Location
- JAEQBL010000033.1:493350-500171[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 45 1.7 1.2e+02 3.8 0.1 2 23 8 30 7 30 0.93 2 45 0.04 2.8 8.9 0.6 1 21 52 72 52 73 0.95 3 45 0.4 28 5.7 4.2 1 23 116 139 116 139 0.96 4 45 0.47 33 5.5 0.1 2 23 167 189 166 189 0.95 5 45 0.00039 0.027 15.2 0.5 2 23 240 262 239 262 0.95 6 45 0.1 7.2 7.6 1.1 2 23 268 290 267 290 0.91 7 45 0.068 4.7 8.1 0.9 2 23 328 349 327 349 0.95 8 45 0.061 4.2 8.3 0.1 2 23 377 399 376 399 0.90 9 45 0.00039 0.027 15.2 1.9 3 23 450 471 448 471 0.95 10 45 0.13 9.1 7.3 1.1 3 23 501 522 500 522 0.96 11 45 0.0036 0.25 12.2 3.2 1 23 599 622 599 622 0.93 12 45 5.3 3.7e+02 2.2 1.4 2 23 650 672 649 672 0.93 13 45 0.001 0.069 13.9 0.7 1 23 694 717 694 717 0.92 14 45 4.9e-05 0.0034 18.0 2.1 3 23 724 744 723 745 0.94 15 45 0.0012 0.084 13.7 3.2 1 23 751 774 751 774 0.95 16 45 0.00068 0.047 14.5 0.3 1 23 779 802 779 802 0.95 17 45 0.011 0.76 10.7 4.9 1 23 806 829 806 829 0.97 18 45 0.11 7.6 7.5 1.0 2 23 836 857 835 857 0.96 19 45 0.23 16 6.5 0.3 1 21 902 922 902 923 0.94 20 45 1.4 98 4.0 0.5 2 23 991 1013 990 1013 0.95 21 45 0.028 2 9.3 3.0 1 19 1036 1054 1036 1057 0.95 22 45 0.013 0.93 10.4 2.8 1 23 1147 1170 1147 1170 0.94 23 45 0.58 40 5.2 0.0 2 23 1198 1220 1197 1220 0.95 24 45 0.032 2.2 9.2 0.6 1 23 1242 1265 1242 1265 0.95 25 45 0.00013 0.0089 16.7 0.8 3 23 1272 1293 1271 1293 0.96 26 45 0.0003 0.021 15.6 2.3 1 23 1298 1321 1298 1321 0.95 27 45 0.0034 0.24 12.2 0.2 2 23 1327 1349 1326 1349 0.93 28 45 0.0074 0.52 11.2 6.7 1 23 1353 1376 1353 1376 0.97 29 45 1 71 4.4 1.2 2 23 1383 1404 1382 1404 0.94 30 45 0.00081 0.056 14.2 2.3 1 23 1446 1468 1446 1468 0.96 31 45 0.69 48 5.0 0.0 2 23 1496 1518 1495 1518 0.90 32 45 0.00016 0.011 16.4 1.5 2 23 1539 1561 1538 1561 0.95 33 45 0.0011 0.08 13.7 0.8 1 23 1566 1589 1566 1589 0.96 34 45 0.0048 0.33 11.8 0.2 1 23 1594 1617 1594 1617 0.97 35 45 0.00011 0.0077 16.9 0.4 2 23 1620 1642 1620 1642 0.97 36 45 6.4 4.4e+02 2.0 1.8 3 22 1651 1670 1650 1670 0.95 37 45 0.02 1.4 9.8 0.5 1 23 1722 1745 1722 1745 0.93 38 45 0.036 2.5 9.0 0.8 2 23 1773 1795 1772 1795 0.94 39 45 0.067 4.6 8.2 0.0 2 23 1817 1839 1816 1839 0.95 40 45 3e-05 0.0021 18.7 0.3 3 23 1846 1867 1845 1867 0.94 41 45 0.018 1.2 10.0 3.7 2 23 1872 1894 1871 1894 0.93 42 45 0.00076 0.053 14.3 3.2 1 23 1899 1922 1899 1922 0.97 43 45 0.00066 0.046 14.5 5.3 1 23 1926 1949 1926 1949 0.97 44 45 0.00048 0.034 14.9 0.6 2 23 1956 1977 1955 1977 0.97 45 45 0.00011 0.0076 16.9 1.1 1 23 1983 2005 1983 2005 0.97
Sequence Information
- Coding Sequence
- ATGTATAGAATTATAGATTTGAAATGTTTTGAATGTGATATAGATTTGATCAATGTGTATGAATTCGTACGCCACGTAGACAGATTACATAGCTATACCGTATTGAACATTGACGATGAATATGATACGGTGAAAGTGAATAAAAAGTTTAGTTTCCAATGTCCCGAATGTTTAAAGACGCTGACATCCAAATTAGGCTTTAGAATGCACTTGAAGAAATGCGGAATAGATAGAAAAACTGAATCCTCTAAGTTTAGAGGCACCAAAACTTTCAGAGTACGCCAGAATGTCGCGTGCATTCTGAAAATGTCGTCCGCATTACCCTTTAAGTTTTTCAAGAATACATTCCGTTGTTTCTATTGTTCTAAAGATTGTTCCGATTTTGATGTCTTGAGAGAGCACACATTGAAATATCATGGACAATTTGATCAAGAATGCGCGGCTATGAAGAAGATTAAAGGCAAAGATCTCATAGTTAAAATTGAAATAACGAATCTCACTTGTAAGATATGTTACGAGCAATTCATGGGCTTGATAGATTTAATAGACCATATAGTAACAAAACACGGAGCAAATTATGATAGTAGTGTTGAATGCGTCCAAATATTTAAAATAAGCAAAGACAATATACCCTGTCCGATATGTCCAGATAGTTATTTCGGTTACTTCAAAAAACTACTGGAGCACATGAACGAACATCATAGCAATAATAATATTGTATGTGTATATTGTGGTGTAACGTTTAGGGGACACTCGAACTATAGGGCCCATATATCACGGTATCATAGACGCAAGGCCTGCACGTGTCCCGAGTGTAAAAAAGATTTTTGGAACTTGGAGAAATTGGCGCGTCACAAAGCCAACGTCCATGATGAAAAAGGACCTCCAAAAACTCTAAGTCCTAACGCTTTGAGGCGCCAGAATCTACTGATCTTGTTTAACAATACGACAGTTATTCCATTTAAATGTCGCGGTAAATGCAGATGCTTCTATTGTGGCGAAGAAATTCCCGTTTACGACGATTTAAAGAAGCACACTAAAGCTCACGGTCCCTGTACGGAACTAGATCGTGCTATAAAATTGATTAAAACAGACGAGGCTGAGGTCAAAGTGGACGTGTCTGATGTGACTTGTGAAGTTTGCAATAAACGTTATTCGAACGTAGATGAAATTGTTACGCATTTAATTGACGAACATAAACTTTCATACAACAGAGATGTTAAACTGTTAATTTCCACGTATAGACTTAAAGATTTACGGTGTCTCCTTTGTGAGAATCAAAAATTCAAGGTTATTAGTAAACTGGTTGCTCACGTAAATAATGATCATCCAAATCAGAATGTAAACTGTGACGTGTGTAACCAGACCTTTAATAAGAAAGGGCATTTAGATGCACACATGAGATTTAAGCATAAAAGTAGCTATAAGTGTTTGAAATGCTGTTCAAATTTCAATTCTTACGGAGCACTTCAAGAGCATAAATTGAAATCACACGCAATTTGCAATATCTGTTTCGTGCAGTTTTCCAGCCAAAAGCGGAGATTGAAACATATGAAAGTGGAGCACGCCAACGAGGCTTTGAAATGTGGGTTTTGTCTCAAGTCGATGAGAACGAGGCTAGGATTTCTGAGACACGCAGCTAAATGTACAGTTAAAAGTGTCAATAAGTCGGAACAGAGAACTTTCATAATAGATGACGATCAAAAGAAACCTTCAGTTGTACTTATTAGGAATAATATAGCTTGCATCCTCAACATGTCGACAGCGATACCGTTTAAATATTTCATGAGCAGATTTAGATGTTTTTACTGTACTAAAAATTTTTCTGATTGCCAAGAACTTCGGGAACACACGGTTGTTGAACATCCCATTTGTGATGTTAATTTTAAGTGTATGAGACTCAGGAATAGACAAGAAGGTTTTATAAAAATAGACATATCACTTCTATCTTGCAAGATGTGTTATGAAAATTTTTCATGTTTTGATACGTTACTTGATCATCTTATTTCCGAGCACAAAGCTTCCTACGATAAAACCATTGACAGCAATATACAGCCATTCAAATTAGTAAAGAATAACTATCCCTGTCCAATGTGCAATGAAATTTATACACATTTTAGTACATTGCTAAAACACATAGGCCAGACCCACACTGATAATAAAAATATATGTATGCATTGCGGAAAATCTTTTCGTAATTTGCCAAATTTAAGGGTACACATTGCTAATCATCATAGGACCACTGGCAGCTACAAGTGTAACAGATGTCATCTAGAGTTTTCTTCCAATAAATATTTACAAACTCATCTTGGACGTATTCACGGCGCAAAAGTTTTCGATTGTCCCGAATGTAATGATAAGTTTTCGTCGAATTATGCTATGCAAAGGCACATGATCAACATCCACAGTTCCGGACATAAGTGCCCCTACTGCGGGAAATTATTTACTTCCAACTGTTTCATGATAGATCACGTGAAAAGAACTCATTTAAAAGAAAAGAATGTCGAGTGTCGAGTCTGTTCTGAGAGGTTTTTTGACACGCAACGCTTAAAAACTCATATGGTAAAGCACAACGGGGAGAGGAATTTTCACTGTGATGTTTGCGATAAATGTACAGCAACAGAGAGGTATGGCATAATCGAGGCAAATCTACGATTATTGTTTCAAAATACTTCCGTGATTCCTTTCGATTGGATCGGTAAATACGCTTGCTTCTATTGCGGTGAGAAAATGGAAGACTACGATGAACTAAAACAGCATACGAAAAATTACTGCACAGATAATAAACGTAACGTTTTATTGGAAGGCGATGGAGGCATAAAAATTGATATATCAAATATAATTTGTGACATTTGTAACATGTCATGGAATAGTATTTATTTGATTTTGAAACATTTAAGTAATTGCCACAATGTTGTTTATAATGCGACTGACTGCTTACCACTGGTGCCATACAAGCTGAAAGATTTGAGCTGTTTCTTTTGTGAGCTGAAGTTTGATTTCATAAATTCTTTGATATCTCACGTTAACAGAGATCACTCCAACCAGGTTATAACCGTTTATTGTGATGGGAATTTAAACAAAAAGTCCAAATCACCTGCTGATTATAGCTGTAAAATATGCTGTAAAAGTTTTCGAAAAATTTCGCAGCTAACAAAACATAATCTTTCTTGCGAAACGAGCACTGAAAAGCGTCGGAACGCATCGGATTCTCTATTATTAGATAAAACATTAAGCAGAGATAACTTTTGTATAGATTCGGTTCTTAATGAAAAAAATGATGATTCAATTTCAAATGTAAAGAAAATTGTATCTAATAAGCAAGAATCCATTACCGCTCAAAACTGCAAGAAGCCAAACGTTAAGATAATAAGGAATAACATAGCTTGTATTCTGAACACATCAACAGCAGTACCATTTAAATATTTCATGAGCAGATTTAGGTGTTTTTATTGTTCAAAAGATTTTGATGACTGCGAGGAACTGAAAGTACATTCCAGTTCCGAGCATCCGCTTTGTACTACCGAAATAAAATCCATGAAGCTGAGGAATAGGCTTGACGGTGGTATTAAAGTTGATATATCGTTCTTGTCATGTAAGATATGTACAGTAGAAATAGATGATTTAGATTCGTTGGTAGAGCATATGATAAGTGAACATAAATTATGTTACGACAAAAGCATACCAAACAACTTACAAGCCTACAAACTAGTCAAAGACAATTTTCCTTGTCCGTTTTGTGATGAGTTGTTTAGATATTTTCGGACTTTGCTAAATCATGTGGCAAAACGTCATTCCGACAATAAGAACATATGTGTCCACTGCGGCTTGTCTTTCCGGAATTTGCCGAATTTACGAGCTCATATCTCAAGAAGACATAGGGTTGCCAACTTTAAATGTTTCAAATGCGATTTGACCTTTACGTCAAACAACTACTTAAAAACCCATTTAGGTAGAGTTCATGACAATAAAGTTGTAGAGTGCCCTGAGTGCACTCAAAGATTTACTTCAGTATATGAAATGCAAAGACATAAAATTAATGCTCACGGCTCGGGACATAAATGCATGCATTGTAACAAACTTTTTACAAGAAACTCATTCATGGTCAATCACATAAGACGCACACATCTAAAAGAAAAGAATGTGGAGTGCACTGTGTGTTGCGAGCGATTCTTTGACGCTCAGCGCTTGAAGGTGCACATGGTGAAACATTACGGCGAAAGAAACTACCACTATCAAGGGCCGTACGACCACTGTACCTCTGAGCGGAGGAGGAAAAACTTGCAAATGTTGTTCAACAACACGACAATATTACCATTCAAATGGCGCGGGAGATATCTATGTTTCTATTGCGGCCAGAATTATAGCAATTATACTGATTTAAAGAACCACACAAAATCACACGGATTATGTAACACTACAGATTACGCACTTAAAATTATAAAAGGAAACAATATAGAAATAAAAATTGACGTATCGGAAATAGTCTGCGAGGTATGCTACGAGCCGTTTTCAAATTTGAACGATATTTTAGATCATTTGATCGGAAAACATGAAATGGATTATGACAGAAACGTCGATATACCGTTCCGAGAATACAGACTGAGCGATTGCAAATGTCAAATGTGTGGCAAACAATTCAGTTACTTTGGATATCTTATTAATCATATAAATATAGTTCATTCAGTAAATACTTTTGCATGCGACAATTGTGGCTCTACATTTTACAAAAAGAGAGATCTGGCGTTGCATATAAGACAATTCCATCGCGAAGGTGGCTATCCTTGCGAGGATTGTTCAGAGGTGTTCGAAACAAACGTACTGCGTAGGAAACATTCAAATACAGTTCATTACAGAAAATGTAAGACGTGCGGAGCTAGGTTTCCATCGTACGTGTTGTTGCAGAAACATATGAAAGTTGATCACCCGAACGACGAAACCCAAAAACTGTGTATGTACTGTTCGAAAGAGTGTCAATCATCACAGGGTATTAGACAGCACATGAAGAAATGTAAATCGAAAAAGGAATTGATTACAGCCTCGATATTCCCGTACGAAAATCCACTACAGCCGAACAAAAAACAAAATGTTATGCAAATAAGAAAAAATATACAATGCGTTCTTAATATGTCAACGGCGATCCCATTTAAATTTTTTGCAAAGTTTTCATGCTTTTACTGTTCCAAATATTTCGTCGAATTCGATGAACTTAAGGTCCACGTCCTTGCGGATCATCCGGTTTGTGATCTAAAAGAGAAATGTATTAAAAATTGTAAAGGTGAAAGAATTACTGTCAAAATTGATATATCAACTTTATCTTGTAAGATTTGTTACCAATCAATATCGGATTTAGACGATCTGATACATCACCTAACGTCCAAACATTTAGCACTATATGATAAATCAATAAAATGCTTTGAGCCGTTTAGAATTATAAAAGACAATATTCCATGCCCGATCTGTCCGAACGTTTTTCGCTATTTCGGCATTCTTTTGAGGCACATTAACTCCGAACATAGCAATAATAACAGAATATGCGATTTTTGTGGTCGCAGTTTCAAAAACGTGTCAAATCTCAAAGTTCATATTACTTATGCACACACCGGTGACTGCGAGTGCGATGTCTGTGGAATGAAGTTCAAAAATCAATGGTGCTTAGGACGGCATAAAGCCAAATCACACGACGCGAAAGATTACAAATGTCCAAAATGTCCAGAGAGATTCCAATCTCAGTATCACAAACAGAAACATCTCATTAAGGTACACGATATCGGGCACAAGTGCACGTATTGCGAGAGGATGTTTACACGGAATTCGTTCATGAAGGATCACGTGAGGCGGACGCATTTGAAAGAGAAAAACGTCCAATGCTCTGTTTGTAATGAGAAGTTCTTTGACAATTACCTTCTAAGAATGCACATGGTCAAACATAAAGGCGAGAGAAAATTTAGTTGCGAGGTTTGTGGCAAGACTTTCTTGAGGAGAAGTAATTTGAGCTCCCATAAGGAGATGCACAAAAAATACGGACATGTATAG
- Protein Sequence
- MYRIIDLKCFECDIDLINVYEFVRHVDRLHSYTVLNIDDEYDTVKVNKKFSFQCPECLKTLTSKLGFRMHLKKCGIDRKTESSKFRGTKTFRVRQNVACILKMSSALPFKFFKNTFRCFYCSKDCSDFDVLREHTLKYHGQFDQECAAMKKIKGKDLIVKIEITNLTCKICYEQFMGLIDLIDHIVTKHGANYDSSVECVQIFKISKDNIPCPICPDSYFGYFKKLLEHMNEHHSNNNIVCVYCGVTFRGHSNYRAHISRYHRRKACTCPECKKDFWNLEKLARHKANVHDEKGPPKTLSPNALRRQNLLILFNNTTVIPFKCRGKCRCFYCGEEIPVYDDLKKHTKAHGPCTELDRAIKLIKTDEAEVKVDVSDVTCEVCNKRYSNVDEIVTHLIDEHKLSYNRDVKLLISTYRLKDLRCLLCENQKFKVISKLVAHVNNDHPNQNVNCDVCNQTFNKKGHLDAHMRFKHKSSYKCLKCCSNFNSYGALQEHKLKSHAICNICFVQFSSQKRRLKHMKVEHANEALKCGFCLKSMRTRLGFLRHAAKCTVKSVNKSEQRTFIIDDDQKKPSVVLIRNNIACILNMSTAIPFKYFMSRFRCFYCTKNFSDCQELREHTVVEHPICDVNFKCMRLRNRQEGFIKIDISLLSCKMCYENFSCFDTLLDHLISEHKASYDKTIDSNIQPFKLVKNNYPCPMCNEIYTHFSTLLKHIGQTHTDNKNICMHCGKSFRNLPNLRVHIANHHRTTGSYKCNRCHLEFSSNKYLQTHLGRIHGAKVFDCPECNDKFSSNYAMQRHMINIHSSGHKCPYCGKLFTSNCFMIDHVKRTHLKEKNVECRVCSERFFDTQRLKTHMVKHNGERNFHCDVCDKCTATERYGIIEANLRLLFQNTSVIPFDWIGKYACFYCGEKMEDYDELKQHTKNYCTDNKRNVLLEGDGGIKIDISNIICDICNMSWNSIYLILKHLSNCHNVVYNATDCLPLVPYKLKDLSCFFCELKFDFINSLISHVNRDHSNQVITVYCDGNLNKKSKSPADYSCKICCKSFRKISQLTKHNLSCETSTEKRRNASDSLLLDKTLSRDNFCIDSVLNEKNDDSISNVKKIVSNKQESITAQNCKKPNVKIIRNNIACILNTSTAVPFKYFMSRFRCFYCSKDFDDCEELKVHSSSEHPLCTTEIKSMKLRNRLDGGIKVDISFLSCKICTVEIDDLDSLVEHMISEHKLCYDKSIPNNLQAYKLVKDNFPCPFCDELFRYFRTLLNHVAKRHSDNKNICVHCGLSFRNLPNLRAHISRRHRVANFKCFKCDLTFTSNNYLKTHLGRVHDNKVVECPECTQRFTSVYEMQRHKINAHGSGHKCMHCNKLFTRNSFMVNHIRRTHLKEKNVECTVCCERFFDAQRLKVHMVKHYGERNYHYQGPYDHCTSERRRKNLQMLFNNTTILPFKWRGRYLCFYCGQNYSNYTDLKNHTKSHGLCNTTDYALKIIKGNNIEIKIDVSEIVCEVCYEPFSNLNDILDHLIGKHEMDYDRNVDIPFREYRLSDCKCQMCGKQFSYFGYLINHINIVHSVNTFACDNCGSTFYKKRDLALHIRQFHREGGYPCEDCSEVFETNVLRRKHSNTVHYRKCKTCGARFPSYVLLQKHMKVDHPNDETQKLCMYCSKECQSSQGIRQHMKKCKSKKELITASIFPYENPLQPNKKQNVMQIRKNIQCVLNMSTAIPFKFFAKFSCFYCSKYFVEFDELKVHVLADHPVCDLKEKCIKNCKGERITVKIDISTLSCKICYQSISDLDDLIHHLTSKHLALYDKSIKCFEPFRIIKDNIPCPICPNVFRYFGILLRHINSEHSNNNRICDFCGRSFKNVSNLKVHITYAHTGDCECDVCGMKFKNQWCLGRHKAKSHDAKDYKCPKCPERFQSQYHKQKHLIKVHDIGHKCTYCERMFTRNSFMKDHVRRTHLKEKNVQCSVCNEKFFDNYLLRMHMVKHKGERKFSCEVCGKTFLRRSNLSSHKEMHKKYGHV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00420706;
- 90% Identity
- -
- 80% Identity
- -