Dmel026563.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Danaus melanippus
Gene Symbol
-
Assembly
GCA_010014825.1
Location
JAAAKD010000756.1:15685611-15692454[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 49 0.67 1.2e+02 5.1 4.5 1 23 48 71 48 71 0.96
2 49 8 1.5e+03 1.7 0.1 2 23 99 121 98 121 0.92
3 49 0.00031 0.057 15.6 0.7 2 23 172 194 171 194 0.95
4 49 0.11 20 7.5 1.1 2 23 200 222 199 222 0.91
5 49 0.0018 0.34 13.1 1.8 1 23 227 250 227 250 0.95
6 49 0.0025 0.46 12.7 7.9 1 23 254 277 254 277 0.97
7 49 0.11 20 7.6 0.1 2 23 284 305 283 305 0.96
8 49 0.073 13 8.1 0.9 2 23 344 365 343 365 0.95
9 49 0.005 0.92 11.8 0.1 2 23 393 415 392 415 0.95
10 49 0.0019 0.34 13.1 1.5 2 23 465 487 464 487 0.94
11 49 8.3 1.5e+03 1.6 4.3 1 23 491 514 491 514 0.96
12 49 0.1 19 7.6 1.2 3 23 517 538 516 538 0.96
13 49 0.0028 0.51 12.6 3.7 1 23 615 638 615 638 0.93
14 49 0.00087 0.16 14.2 0.4 1 23 710 733 710 733 0.92
15 49 5.2e-05 0.0096 18.0 2.1 3 23 740 760 739 761 0.94
16 49 0.0013 0.24 13.6 3.2 1 23 767 790 767 790 0.95
17 49 0.0034 0.62 12.3 0.3 3 23 797 818 795 818 0.95
18 49 0.012 2.1 10.6 4.9 1 23 822 845 822 845 0.97
19 49 0.029 5.4 9.3 0.9 2 23 852 873 851 873 0.96
20 49 0.17 32 6.9 1.1 1 23 879 901 879 901 0.94
21 49 0.7 1.3e+02 5.0 0.3 1 21 937 957 937 958 0.94
22 49 3.8 7e+02 2.7 0.5 3 23 984 1005 982 1005 0.92
23 49 1.8 3.2e+02 3.7 0.2 2 23 1026 1048 1025 1048 0.94
24 49 0.084 15 7.9 3.5 1 19 1071 1089 1071 1092 0.95
25 49 0.004 0.74 12.1 2.1 1 23 1181 1204 1181 1204 0.94
26 49 0.33 60 6.1 0.0 2 23 1232 1254 1231 1254 0.95
27 49 0.0025 0.45 12.7 0.6 1 23 1276 1299 1276 1299 0.93
28 49 0.00014 0.025 16.7 0.8 3 23 1306 1327 1305 1327 0.96
29 49 0.00025 0.046 15.9 1.3 1 23 1332 1355 1332 1355 0.95
30 49 0.012 2.2 10.6 0.2 2 23 1361 1383 1360 1383 0.90
31 49 0.0079 1.5 11.1 6.7 1 23 1387 1410 1387 1410 0.97
32 49 1 1.9e+02 4.5 1.8 2 23 1417 1438 1416 1438 0.95
33 49 0.11 21 7.5 0.6 1 20 1444 1463 1444 1465 0.87
34 49 0.00068 0.13 14.5 1.7 1 23 1509 1531 1509 1531 0.96
35 49 2 3.7e+02 3.6 0.0 3 23 1560 1581 1558 1581 0.89
36 49 0.00017 0.031 16.4 1.5 2 23 1602 1624 1601 1624 0.95
37 49 0.00022 0.039 16.1 0.4 1 23 1629 1652 1629 1652 0.96
38 49 0.15 28 7.1 1.1 1 23 1657 1680 1657 1681 0.93
39 49 0.0041 0.74 12.0 0.5 2 23 1683 1705 1683 1705 0.96
40 49 2.8 5.2e+02 3.1 2.3 3 22 1714 1733 1713 1733 0.95
41 49 0.01 1.9 10.8 0.8 1 23 1785 1808 1785 1808 0.96
42 49 0.066 12 8.2 0.2 2 23 1836 1858 1835 1858 0.94
43 49 0.071 13 8.1 0.0 2 23 1880 1902 1879 1902 0.95
44 49 3.2e-05 0.0059 18.6 0.3 3 23 1909 1930 1908 1930 0.94
45 49 0.019 3.5 9.9 3.7 2 23 1935 1957 1934 1957 0.93
46 49 0.00081 0.15 14.3 3.2 1 23 1962 1985 1962 1985 0.97
47 49 0.00071 0.13 14.4 5.3 1 23 1989 2012 1989 2012 0.97
48 49 0.00052 0.094 14.9 0.6 2 23 2019 2040 2018 2040 0.97
49 49 0.00012 0.021 16.9 1.1 1 23 2046 2068 2046 2068 0.97

Sequence Information

Coding Sequence
ATGCATTTGACGAAATGCGGAATTGATAGAAAAACAGAATCATCAAAGTTTAAAGGCACCAAAACGTTCAGAGTACGACAGAATGTTGCGTGCATTTTGAAAATGTCTTCTGCGTTACCCTTCAAGTTTTTCAAGAATACATTCCGTTGTTTCTATTGTTCAAAAGATTGTTCAGATTTTGATGTCCTTAGAGAGCACACATCTAAATATCATGAACAATTTGATCAAGAGTGCGCTGCTATGAAGAAAATTAAAGGCAGAGATCTCattgttaaaattgaaataacaaatcTCACTTGTAAGATATGTTACGAGAAACTCATGGGCTTGATAGATTTAATAGACCATATAGTAACAAAACACGGAGCGAATTACGATAATAGTGTTGAATGCCttcaaatctttaaaataagcaAAGAGAATATACCCTGTCCGATATGCCCGGATAGTTATTTTGGTTACTTCAAAAAACTACTGGAGCACATGAACGAACACCATAGCAATAATAACATTGTGTGTGTATATTGTGGTCTTACGTTTAGGGGACACTCGAACTATAGGGCTCATATATCACGGTATCACAGACGAAAAGCATGCACGTGTCCCGAGTGTAAAAAGGATTTTTGGAACTTGGAGAAATTGGCGCGTCACAAAGCTAACGTCCATGGTACTAAGAACTTCAAATGCGTccaatgtaatgaaaaatttatcacCCAACACCTGATGCGACGACATTTAGTATCGGCTCACGGTTCGGGGCATAAGTGCTCGCATTGTGGCAAATTATTTACTCTAAATTCACATATGAGGAATCACGTACGAAGGTCGCACCTAAAGGAGAAAAACGTGGAATGTCCAGTTTGTAAGGACAGGTTTTTTGATATCGCTCTGCTAAAAGTGCACATGGTAAAACATGTCGATGAAAAAGGACCTCCAAAAACTCTAAGTCCTAATGCGTTGAGGCGCCAGAATCTACTGATCTTGTTTAACAATACGACAGTTATTCCATTTAAATGTCGCGGTAAATGCAGATGCTTTTATTGTGGCGAAGAGATCCCTGTTTACGACGATTTAAAGAAGCACACCAAAGCTCATGGTCCTTGTACGGAACTAGATCGTgctataaaattgattaaaacagACGAAGCCGAGGTCAAAGTGGATGTATCGGATGTGACTTGTGAAATTTGCAATAAACGTTATTCGAATCTAGATGAAATTGTCACGCATTTGATCGTCAAACATAAACTTTCATACAACAGAGATGTCAAACTGTTAATTTCCACGTATAGACTGAAAGACTTACGGTGTCTCCTTTGTGAGAATCAAAAGTTTAAGGTTATTAGCAAATTGGTTGCTCACGTAAataatgatcatttaaatcaGAATGTAAGCTGTGACGTATGTAACCAGACCTTTAATAAGAAGGGGCATTTGGATGCACACGTGAGATTTAAGCACAAAAGTAGCTATAAGTGTTTGAAATGCTGTTCAAATTTCAATTCTTACTCAGCACTTCAAGAGCATAAATTGAAATCACACGCAATTTGCAATATCTGTTTCGTGCAGTTTTCCACCCAGAAGCGGAGATTAAAACATATGAAAGTTGAGCACGCCAATGAGGCTCTGAAATGTGGGTTTTGTCTCAAGTCGATGAGAACGAGGCTAGGATTTCTGAGACACGCAGCTAAATGtacagttaaaaatatcaataaatcgGAACAGAGAACCTTCATAATAGATGACGACGTAAAGAAACCTTCAGTTGTCCTTATTAGGAATAATATAGCATGTATCCTGAATATGTCGACAGCGATAccgtttaaatatttcatgagcAGATTTAGATGTTTTTACTGTACTAAAAATTTTTCTGATTGCAAAGATCTTAGAGAACACACGGTCGTCGAACATCCCATTTGTGATGttaactttaaatgtatgaGACTCAGGAACAGACAAGAAGGTTCTATAAAAATTGACATATCACTCCTATCTTGCAAGAtgtgttttgaaaatttttcatgttttgATACCTTACTTGATCATCTTGTTTCCGAACACAAAGCGTCCTACGACAAAACCATTGACAGCAATATACAGCCGTTCAAATTAGTAAAGAATAACTATCCCTGTCCAATGTGCAATGaaatttatacacattttaGTACATTGTTAAAACACATAGGCCAAATACACACTGATAACAAGAATATATGCATGCATTGCGGAAAATCATTTCGTAATTTGCCTAATTTAAGAGTACACATTGCTAATCATCATAGGACCACTGGCAGCTACAAGTGTAATAGATGTCATCTAGAATTTtcttccaataaatatttacaaactcaTCTTGGACGAATTCACGGCGTAAAAGTTTTCGGTTGTCCTGAATGTAATGATAAGTTTTCGTCGAATTATGCCATGCAAAGACACATGATCAACATGCACAGTTCCGGGCATAAGTGCCCCTATTGTGGGAAATTATTTACTTCCAACTGTTTCATGATAGATCACGTGAAAAGAactcatttaaaagaaaagaatgtCGAATGCCAAATCTGTTCTGAGAGGTTTTTTGACACGCAACGCTTAAAAACTCATATGGTGAAGCACAACGGGGAGAGGAATTTTCACTGTGATGTTTGCGGTAAACAGTTCCTTTGGAAAAAGAATCTGAGGGGTCACATGGCTTTACACAGTAAAAATAAATTTACAACAGCAGAGAGGTATGGTATAATGGAGGAAACTCTCCGATTATTGTCTCGAAATACTTCCGTGGTTCCTTTCAATTGGATCGGTAAATACGCTTGCTTCTATTGCGGCGAGAAAATGGAAGGCTACGACGACCTAAAAAAGCATACGAAAAACTACTGCACAGATTGTAATCATCACAATTCAGTAGAAGTTTACGGAAGGATAAAAgttgatatatcaaatataatttgtgacaTTTGTAACAAGCCATGGAATAGTATTTATTTGATTCTGAAACATTTAAGGAATTGCCATAACGTAGTTTATGACACGGCTGACACCTTACCACTAGTGCCATACAGGCTGAAAGATTTGAGCTGTTACTTTTGTGATTTGAAATTTGATCTCATAAATTCTTTGATATCTCACGTTGATACAGATCACCCCAACCAGGTTATAACCGTGAATTGCGAtgggaatttaaataaaaagtccaAAACACTTGCCGATTATAGGTGCAAAGTATGCTGTAAAAGTTTTCGAAATTTTCCGCAGCTAACAAAACACAATCTTTCTTGTAAAACGAGCACTGAAAACCGTCGGAACGAATCAGATACTCTATTGTTGGATGAAACTTTAAGCagagataaattttgtatagatTCCGGTCTTTATGGGAAAAATGATGACTCAATTTCAACTGTAAAGAAAATACCTGACATGTATGAAACTATAACCGCTCAACACTACAAGAAGCCAAACGTTAAGATAATAAGGAACAACATAGCTTGTATTCTCAATACATCAACAGCGgtaccatttaaatatttcatgagcAGATTTAGGTGTTTCTATTGTCCAAAAGATTTCGATGACTGCGAAGAACTGAAAGTACATTCCAGTTCCGAGCATCCGTTTTGTACTAccgaaataaaatcaatgaagcTGAGGAATAGGCATGACGGTGGTATTAAAGTGGATATCTCATTATTGTCATGTAAGATATGTACAGTAAAAATAGATGATTTAGATTCGTTGGTAGAGCATATGATTagtgaacataaaatatattacgacaGAAGCATACCGAACAACTTACAAGCTTATAAACTAGTCAAAGACAATTTCCCTTGTCCGTTTTGTGATGAATCGTTTAGATATTTTCGGACTTTACTAAATCATGTTGTAAAACTTCATTCagacaataaaaacatatgcgTCCATTGCGGCCTGTCTTTCCGGAATTTGCCGAATTTACGAGCCCATATCTCAAGAAGACATAGGGTTGCCAACTTTAAATGTCTCAAGTGCGATTTGACCTTTACGTCCAATAACTACTTACAAACCCATTTGGGTAGAGTTCATGGCAATAAAGTTGTAGAGTGCACTGAATGCACTGAAAGATTTACGTCCGTATATGAAATGCAAAGACATAAAATTGATGCTCACGGCTCGGGACATAAGTGCATGCATTGTAACAAACTCTTTACAAGAAACTCGTTCATGGTTAATCACATAAGACGCACACATCTAAAAGAAAAGAATGTGGAGTGCACTGTGTGTTGTGAGCGATTCTTTGACTCTCAGCGCTTGAAGGTGCACATGGTGAAACATTACGGCGAAAGAAACTACCATTGTGATATCTGCGGGAAAAAGTTCCTATGGAAGAAAAATTTAAGAGGACACATGTCAGAAGATTCAAGCAAGAGCAATTTGTTCACAGATCAAGGACCGTACGACCACTGTACCTCTGAGCGGAGGAGGAAAAACTTGCAAATGTTGTTCAACAACACGACAATATTACCATTCAAATGGCGTGGGAGATATCTCTGTTTCTATTGCGGCCAGAATTACAGCAATTATCCTGATTTAAAGAAACATACAAAATCACACGGCTTATGTAACACGACAGATTATGCgctcaaaattataaaagggaacaatatagaaataaaaattgacgTGTCAGAAGTGATCTGCGAATTATGCTACGAGCCATTTTCAAATTTGAACGAGATTTTAGATCATTTGATCGGAAAACATGAAATGGAGTACGATAGAAATGTTGATATACCATTCCGAGAATACAGACTGAGTGATTGCAAATGTCAAATGTGTGGGAAACAGTTCAGTTACTTCGGATAtcttataaatcatataaatatagtcCATTCAGTAAATACTTTTGCGTGCGACAATTGTGGtgcaacatttaataaaaagagagaTCTGGCGTTGCATATACGACAGTTCCATCGTGAAGGTGGCTATTCTTGCGACGATTGTTCAGAGGTGTTCGATACAGACGTACTGcgtaaaaaacattcaaattcaGTTCATCATAGGAAATGTAAGACATGCGAAGCCAGGTTTCCATCATACGTGCTGTTACAGAAACATATAAAGCTTGATCATCCGAATGACGGAACCCATAAACTGTGCATGTACTGTTCGAAAGAGTGTCAATCATCTCAGGGTATGAAACAGCATATGAAAAAATGTAAGTTGAAAAAGGAAGTGCTTACAGCTACGATATTTCCGTACGAAAATTCTCTACAGccgaacaaaaaacaaaatgtcatgcaaataagaaaaaatatacaatgcgTTCTTAACATGTCAACAGCGataccttttaaattttttgccaAATTTTCTTGCTTTTATTGTTCCAAATATTTTGTCGAATTTGATGAACTTAAGGTTCACGTCCTATCGGATCATCCGGTTTGTGATTTAAaagagaaatgtattaaaaattgtaaaggtGAAAGAATTACTGTCAAAATTGATATATCAACATTATCGTGTAAGGTCTGTTACCAGTCAATATCAGATTTAGACGATCTAATACAGCATCTAACGTCCAAACATTTAGCGCTATACGACAAATCAATAAAATGCTTTGAGccttttagaattataaaagaCAACATACCATGCCCAATCTGTCCAAACGTTTTTCGTTATTTCGGCATTCTTTTGAGGCACATAAATTCCGAACATAgcaataataacagaatatgtGATTTTTGTGGTCGCAGTTTCAAAAACGTATCAAATCTCAAAGTTCATATTACTTATGCACACACCGGTGACTGTGAGTGCGATGTTTGTGGAATGAAGTTCAAAAATCAATGGTGTTTAGGACGGCATAAAGCTAAGTCACACGACGCGAAAGATTACAAATGTCCGAAATGTCCGGAGAGATTCCAATCTCAGTACCACAAACAGAAACACCTCATCAAAGTACACGACATCGGTCACAAGTGTACGTATTGCGAGAGAATGTTTACACGGAATTCGTTCATGAAGGATCATGTGAGGCGGACGCATTTGAAAGAGAAGAACGTCCAATGCTCCGTTTGCAATGAGAAGTTCTTTGACAATTACCTTCTAAGAATGCATATGGTCAAACACAAAGGCGAGAGAAAATTTAGTTGCGAGGTTTGCGGCAAGACTTTCTTGAGGAGAAGTAATTTGAGCTCCCATAAGGAGATGCACAAGAAATACGGACATGTATag
Protein Sequence
MHLTKCGIDRKTESSKFKGTKTFRVRQNVACILKMSSALPFKFFKNTFRCFYCSKDCSDFDVLREHTSKYHEQFDQECAAMKKIKGRDLIVKIEITNLTCKICYEKLMGLIDLIDHIVTKHGANYDNSVECLQIFKISKENIPCPICPDSYFGYFKKLLEHMNEHHSNNNIVCVYCGLTFRGHSNYRAHISRYHRRKACTCPECKKDFWNLEKLARHKANVHGTKNFKCVQCNEKFITQHLMRRHLVSAHGSGHKCSHCGKLFTLNSHMRNHVRRSHLKEKNVECPVCKDRFFDIALLKVHMVKHVDEKGPPKTLSPNALRRQNLLILFNNTTVIPFKCRGKCRCFYCGEEIPVYDDLKKHTKAHGPCTELDRAIKLIKTDEAEVKVDVSDVTCEICNKRYSNLDEIVTHLIVKHKLSYNRDVKLLISTYRLKDLRCLLCENQKFKVISKLVAHVNNDHLNQNVSCDVCNQTFNKKGHLDAHVRFKHKSSYKCLKCCSNFNSYSALQEHKLKSHAICNICFVQFSTQKRRLKHMKVEHANEALKCGFCLKSMRTRLGFLRHAAKCTVKNINKSEQRTFIIDDDVKKPSVVLIRNNIACILNMSTAIPFKYFMSRFRCFYCTKNFSDCKDLREHTVVEHPICDVNFKCMRLRNRQEGSIKIDISLLSCKMCFENFSCFDTLLDHLVSEHKASYDKTIDSNIQPFKLVKNNYPCPMCNEIYTHFSTLLKHIGQIHTDNKNICMHCGKSFRNLPNLRVHIANHHRTTGSYKCNRCHLEFSSNKYLQTHLGRIHGVKVFGCPECNDKFSSNYAMQRHMINMHSSGHKCPYCGKLFTSNCFMIDHVKRTHLKEKNVECQICSERFFDTQRLKTHMVKHNGERNFHCDVCGKQFLWKKNLRGHMALHSKNKFTTAERYGIMEETLRLLSRNTSVVPFNWIGKYACFYCGEKMEGYDDLKKHTKNYCTDCNHHNSVEVYGRIKVDISNIICDICNKPWNSIYLILKHLRNCHNVVYDTADTLPLVPYRLKDLSCYFCDLKFDLINSLISHVDTDHPNQVITVNCDGNLNKKSKTLADYRCKVCCKSFRNFPQLTKHNLSCKTSTENRRNESDTLLLDETLSRDKFCIDSGLYGKNDDSISTVKKIPDMYETITAQHYKKPNVKIIRNNIACILNTSTAVPFKYFMSRFRCFYCPKDFDDCEELKVHSSSEHPFCTTEIKSMKLRNRHDGGIKVDISLLSCKICTVKIDDLDSLVEHMISEHKIYYDRSIPNNLQAYKLVKDNFPCPFCDESFRYFRTLLNHVVKLHSDNKNICVHCGLSFRNLPNLRAHISRRHRVANFKCLKCDLTFTSNNYLQTHLGRVHGNKVVECTECTERFTSVYEMQRHKIDAHGSGHKCMHCNKLFTRNSFMVNHIRRTHLKEKNVECTVCCERFFDSQRLKVHMVKHYGERNYHCDICGKKFLWKKNLRGHMSEDSSKSNLFTDQGPYDHCTSERRRKNLQMLFNNTTILPFKWRGRYLCFYCGQNYSNYPDLKKHTKSHGLCNTTDYALKIIKGNNIEIKIDVSEVICELCYEPFSNLNEILDHLIGKHEMEYDRNVDIPFREYRLSDCKCQMCGKQFSYFGYLINHINIVHSVNTFACDNCGATFNKKRDLALHIRQFHREGGYSCDDCSEVFDTDVLRKKHSNSVHHRKCKTCEARFPSYVLLQKHIKLDHPNDGTHKLCMYCSKECQSSQGMKQHMKKCKLKKEVLTATIFPYENSLQPNKKQNVMQIRKNIQCVLNMSTAIPFKFFAKFSCFYCSKYFVEFDELKVHVLSDHPVCDLKEKCIKNCKGERITVKIDISTLSCKVCYQSISDLDDLIQHLTSKHLALYDKSIKCFEPFRIIKDNIPCPICPNVFRYFGILLRHINSEHSNNNRICDFCGRSFKNVSNLKVHITYAHTGDCECDVCGMKFKNQWCLGRHKAKSHDAKDYKCPKCPERFQSQYHKQKHLIKVHDIGHKCTYCERMFTRNSFMKDHVRRTHLKEKNVQCSVCNEKFFDNYLLRMHMVKHKGERKFSCEVCGKTFLRRSNLSSHKEMHKKYGHV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00421524;
90% Identity
-
80% Identity
-