Basic Information

Gene Symbol
rbr-2
Assembly
GCA_018135715.1
Location
CM030930.1:910550-922213[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.3e-16 3.7e-13 50.0 0.0 6 88 1014 1093 1010 1094 0.91
2 2 0.98 2.7e+03 -0.9 0.0 28 84 1336 1392 1309 1398 0.71

Sequence Information

Coding Sequence
ATGAAGACAAAAGTCCAAGCTCAACGCAAGTTCGCTCAAGGTGCCTATGTGCCGCCTGCACTCAACGTCTCTGGCGGAGGAATAGATAGAAGGACTGAGATATCACCTATAAAAGAAAAAAGTGTCTTCCATAATAAAACATCAGCGAGGTCGCTGTTGGATATCGTAGCGTTTAAAAATTTACACAAACACGCCCAACCTATAGTATTGTTGGAACGGCTAGAAAACAGTCATCCTTTGTGCTCAAAGGATCGATCAAATCCAATAGCCTTGGCCAAACCATCAGGCGTTACGATAAACAAAACAAGCCATGAACCGATCCCACCAGTATCCAACGCAACACATAGCTCGCCCATGTCACGTGACAGAACCAGGAACGCTAGGATCATTACGCCCAGGCTACCCATGCACTTGAGATCGAGGGTAGTCACATACGGCGAGAGAAAGAAAGTCTTGGTCTCCAAGAAGAAGAACTTTGAGAATCGCGAGAAGAATATTGTTAAAATACGGAATTCACGTGAATTGAGAAAGAAGAAACGACCCGACAATTATTCTGACGACTTCTCCATTGACGACGACAAGCCTCTAATGTTCTTCAGACAAAAGTCGTTGAGCTTAAAGAAAGATGCATCTATGAAGCAAAGAAAGATCAATAATAAACGCCCAAAGTCAGTTAAAAACTCCGAGCCAAAACCTAGAAATAAGACTAAAATTGTACGACCTGGCCTAAATCTGCAAGGTAAAGATGCAGTGAAACGTAGTTCGTCGTGTTTAGATCAAAGCGCAGTACAAGGACCAGCGTCGTGCAGAACGAATATAGACCCCATACCAGGGCTACCGTCCTCCAATAAAAATATTAGCCCTATCCTGGAAGCAGCGCCTTCCACTAAAGACGTAATCCCTGTCCCAGAAACTTCGCCGACCACTACAAAAACTAACCCCGTTTCTGGTCTGCCAACACGCAACACCAATACAAATACTACACCACTGTCATCACAAGCTGTCATCACAAGCAACAACAAAGAGGAGGGACAAAATCTTGGACCATCATTTCCAAATAAAAACGTGGACTTTGTTCCTGGAACGGTAACACCAAATGTAAATGCGAATCTTATTAATGTGCTTTCGACGTCCAATTTGATAGTGGACGCGAATGTTAGACCAGCATTCGCTGGTATGAACATGGACACGAGCGGCGGTCAAGTACCAGACAAAATAGACGTGAACCCTTACTCCTGGCCCGCCTCCCATATGAATATGGAAACTATTCCTGTGCAAACATTCCCTAATGGAAATATGGGACCCATTCCGGTAACGTCCCCACCCGGTATCAATGTGAACCCCATTACGGGACCACAGTCACAGATATACGTGGTGAATGTACCGGGTTCATCGTCAAATATATATGTGGTCCCCGTCCCGGGTGCATCAACCTTTGCATATGCGACCCCCGTCCCAGCACCGACATCGACGAATTTATACGTGGACAGTATCCCCGGGCCATCGTCACTGAACATATACAAAGATCCTTTACCAGGGCCGTCATGCACGGGCGTGTATGCCGTCGCTACTTCAGCTCCGTCCACAAATATTTGTTCAGACAATGACCGAGGCCCTTCGTCATCAAATATTTATACGGGCAATGTCTCTGAGCCGTCAGCATCAATGCCATGCGCAACGTCTGGTTCATTGCCATCATGCCTAAATACTCACCCAGCCCTAGCATCAGGTTGTTCATCTCCGAACGCATCCACAGCCTCCACTGCCAGTTCACCATCCTCAAATCAAGTGCCGACAGCTTCTTCGTCAGAAATTTATTCGCATCCCGTCCCAGGAACTTCAAGTTCCAGTGTATGTTCAGACCCCATCCCGAATACATCCTCAATCGGACGTAACAAAAGAACCACAGCAAAGCAGAGACGGAAGTCGTCTACGAAGTCAGCATCATCATTAACAAGGATTTCAGAACAACCAATGGCGCTGAGAGCACCGTTTTATGGAATAAAGATGATCGAGACCTGGTTGTCATCAGATTTTAGGGTGGTCACTGCACCACCACCACCGCCACCGCCTAAGAAGAAGTCCAACGACCCATCAGAAGCCAGAGGGGTAACTATGTCCCCAGAACCTGAAATTGACGAGACTGAGCAATGTATCGGGGCAAAATTTTCAACTATAAAGGACATCATAAACTACGGCCCGAGCTATTTCGATTGCCTGTGTCTGCAATGTGACCATTGCAATTATATTTATAAAATGTTGAATAAGTATAAACAGGATTCCAGTGCAGCCAGACATGTAGAGGTCGGGATGAGGAAGCGGAAACACGAGGAATCCTTGACCGTGGAGCGTCAAGAAGCGTCGGATTCCATGGTCATCGAGGTTTCAGACAGTGAGGATATAAATACGATCGACCTTACCGGTGACACCGATGACCTCATGCAAGATAGTGAAGCTTCAAACTGCTCTCCAAAGCCAGCTAACAGTAGCAACCCGCAGCCAGAGAATGGCAGCCAGCAGAATGAAGCGCAACGCGATTCACCAGGTGAAAGGTTGCAGAATCAATTAGCAAGGAATCTAGCGCAGCGGATACAAACACAACAGAGCCAAAGACGAATTCAACAGAGGCAGAGACAGCGTGTCGGCCGACAGGCGGGTTCCTCGTTACGTGGCCGACAGAGAATTGTACCGAGGGCGGTCCAGCGGCCATTGAGGCGGGTAGTTGTTAATAAAGTTGTGAACAGGAGATCGCTAACGAGGTACTCATACCAGACGAGCAAGCACTCTGATAACGTGTCCAGGATACTGCGAGACAAGATCATCACCGCTCCCGTGTTCTATCCGACTCTAGAGGAATTTTCGGATCCCATGGCCTATCTCGAGAAGATTATGAAATTTACGAAGAAATACGGTATCTTCAAACTAGTGGCGCCAGACGAATATGAACCCACTTGTACTATATCCGAGAACTTTAAATTCAGTACATCCCATCAATACATAGCTCGGTTCTTCAATCGCTGGGGTCCCGCTGCTAGGGAACTATGTACCATGAGGGCTTATTTAGCTACACAGAACGTTCATTTCAAACGAGGGCCTTTGCTAGGTGGTCTAGAGGTCGATCTGCCCAAAGTGTTCCATATCGTCCAAAGACTGGGCGGCTTAAAGACTGTCATGGACAAAAAGAAATGGCATCGCATCGCCGAAGAATTGAACCTTAGAAATTTACGTAACCCAGAGAAGAAGTTTGATAATTTATTCCTAAAGTACTTGTTGCCATACAACAGTCTGACTAAAAGAGAACGGCAGGACATGATGATGAAGGTGGAACAGAGGTGGATCAAGAAGAACAATAGACTGATGAAGCGTGTCGTGAACCCGCTGTACCGGCAGAAACGTATGCTGGGAGAGATTGAGTCGTCCGACGAGGAAGCCGAGGACGAGGACTATCTCACAGAGGCGCTCAATCTCGCCGAAGACTGTAGTCAACTAGGACGGAAGATGGGTCTCGAGGCCTTCAAGAAGATTGCCGGAACCGCATTCAATATGTACTTCCCGGATGAGAAGGCTCAGCCCACTGTAGCTGAGATCGAGGAGAAGTATTGGAACATTGTGCTGCTGGGCACCCAGCATGTGTCGGTTAACACGGCATTCATAGAGAGCGGCGTAGAAGGAAACATATCACCCAAAAGCAAGACGAGTGATGCTATCACCACCAGCCCCTGGTATTTGAAGAATCTGAGTACCGACAAGAGTAATGTCCTACGCTTGCTCGGCTCGTTGGCTGGTATGACAGTGCCGTCGCTCCACGTGGGGATGGTGTTTTCAACCAGTTGCTGGCACCGCGACCCCCATGGGTTACCATGGATGGATTACTTGCACCAAGGGACAGAGAAGATATGGTACGGAGTACCCAGCCACGAAGGGCAGAACTTCCGTTGCGCTCTGGAAACTCTCTGCCCTACTCTGTGCCAGAACAAAACTTTGTGGCTACCCTCCGAGATCGCAATGACACCGCTCAACCTCCTGTTAGACCGCAACATCAAACTGACACGCTGCGTACAGCGGCCGGGCGAATTCGTGTTCGTCAACCCCCAGGCGTATTCTAGTTCGGTGTCCACTGACTTCACTGTTTCGGAGAGCGTTTACTTCGCTACCGAGTCCTATTTCGAAAACGTCAATCAGGCCTTCCAGGAGTTGAAGGAGAGCTGCGAGCCGTCGTCGTTTTCGCTGGAACAGCTGCTGATATCCGCGGCCAAGGATCCGCATCTATCACCGAACGTTCTGGAACACGTCAACAAACATCTCAACGACATAGTGTCCGAAGAGCTCTCCTTCAGGAGGGCGCTCACCGACCTCAAAGTACCGTTGCTGCTGAATAAAAACCGTCCAACAATATGGAGTGCTCGTGATGACGATGAATGCCAAGTCTGCAGGACGGCGTTGTATTTGTCGCGTGTAACGGGACTTTTTAAGAACGCCTCCGTGTGTCTGCAACACGCTCTGAGACTGATCAACTTGAAAAAAGGGGCCGAGCTGAAGGCGTTGATAGCGACCCTCGCGATGGAAGTGACGATAAGCAATCAAGAGCTACACGACATCGTCGTTAAACTGCAGAGGAGACTGTCGCAGAGAGCGAAGTGA
Protein Sequence
MKTKVQAQRKFAQGAYVPPALNVSGGGIDRRTEISPIKEKSVFHNKTSARSLLDIVAFKNLHKHAQPIVLLERLENSHPLCSKDRSNPIALAKPSGVTINKTSHEPIPPVSNATHSSPMSRDRTRNARIITPRLPMHLRSRVVTYGERKKVLVSKKKNFENREKNIVKIRNSRELRKKKRPDNYSDDFSIDDDKPLMFFRQKSLSLKKDASMKQRKINNKRPKSVKNSEPKPRNKTKIVRPGLNLQGKDAVKRSSSCLDQSAVQGPASCRTNIDPIPGLPSSNKNISPILEAAPSTKDVIPVPETSPTTTKTNPVSGLPTRNTNTNTTPLSSQAVITSNNKEEGQNLGPSFPNKNVDFVPGTVTPNVNANLINVLSTSNLIVDANVRPAFAGMNMDTSGGQVPDKIDVNPYSWPASHMNMETIPVQTFPNGNMGPIPVTSPPGINVNPITGPQSQIYVVNVPGSSSNIYVVPVPGASTFAYATPVPAPTSTNLYVDSIPGPSSLNIYKDPLPGPSCTGVYAVATSAPSTNICSDNDRGPSSSNIYTGNVSEPSASMPCATSGSLPSCLNTHPALASGCSSPNASTASTASSPSSNQVPTASSSEIYSHPVPGTSSSSVCSDPIPNTSSIGRNKRTTAKQRRKSSTKSASSLTRISEQPMALRAPFYGIKMIETWLSSDFRVVTAPPPPPPPKKKSNDPSEARGVTMSPEPEIDETEQCIGAKFSTIKDIINYGPSYFDCLCLQCDHCNYIYKMLNKYKQDSSAARHVEVGMRKRKHEESLTVERQEASDSMVIEVSDSEDINTIDLTGDTDDLMQDSEASNCSPKPANSSNPQPENGSQQNEAQRDSPGERLQNQLARNLAQRIQTQQSQRRIQQRQRQRVGRQAGSSLRGRQRIVPRAVQRPLRRVVVNKVVNRRSLTRYSYQTSKHSDNVSRILRDKIITAPVFYPTLEEFSDPMAYLEKIMKFTKKYGIFKLVAPDEYEPTCTISENFKFSTSHQYIARFFNRWGPAARELCTMRAYLATQNVHFKRGPLLGGLEVDLPKVFHIVQRLGGLKTVMDKKKWHRIAEELNLRNLRNPEKKFDNLFLKYLLPYNSLTKRERQDMMMKVEQRWIKKNNRLMKRVVNPLYRQKRMLGEIESSDEEAEDEDYLTEALNLAEDCSQLGRKMGLEAFKKIAGTAFNMYFPDEKAQPTVAEIEEKYWNIVLLGTQHVSVNTAFIESGVEGNISPKSKTSDAITTSPWYLKNLSTDKSNVLRLLGSLAGMTVPSLHVGMVFSTSCWHRDPHGLPWMDYLHQGTEKIWYGVPSHEGQNFRCALETLCPTLCQNKTLWLPSEIAMTPLNLLLDRNIKLTRCVQRPGEFVFVNPQAYSSSVSTDFTVSESVYFATESYFENVNQAFQELKESCEPSSFSLEQLLISAAKDPHLSPNVLEHVNKHLNDIVSEELSFRRALTDLKVPLLLNKNRPTIWSARDDDECQVCRTALYLSRVTGLFKNASVCLQHALRLINLKKGAELKALIATLAMEVTISNQELHDIVVKLQRRLSQRAK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00420330; iTF_00419571;
90% Identity
-
80% Identity
-