Basic Information

Gene Symbol
rbr-2
Assembly
GCA_018231745.1
Location
DVQP01001646.1:17-8750[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.6e-16 4.8e-13 50.0 0.0 6 88 992 1071 988 1072 0.91
2 2 1.2 3.5e+03 -0.9 0.0 28 84 1314 1370 1287 1376 0.71

Sequence Information

Coding Sequence
ATGAAGACAAAAGTCCAAGCGCAGCGTAAGTTCGCTCAAGGCGCCTACGTGCCGCCCGCCCTCAACGTCTCCGGCGGAGGAATAGATCGAAGAACTGAGATATCAcctataaaagaaaaaagtgtCTTCCATAACAAAACATCAGCGAGGTCGCTGTTGGACATTGTAGCgttcaaaaatttacaCAAACATGCCCAACCTATCGTGCTGTTGGAGCGGCTTGAAAACAGTCATAATTTGTGTTCAAAGGACCGAGCTAATCCAATAGCCTTGGCCAAACCATCAGGCGTCacgataaacaaaacaaatcatGAGCTGATCCCACCGATGTCCAACGGAACACATGGCTCGCCTGTCTCACGAGACAGGACCAGGAACGCTAGGGTCATAACACCCAGACTGCCCATGCATCTGAGGTCGAGGGTAGTCACATACGGCGAAAGAAAGAAAGTCTTAGTCACCAAAAAGAAGAACTTCGAGAACCGCGAGaagaatattgtaaaaatacgGAATTCACGTGAATTGAGAAAGAAGAAACGACCCGACAATTATTCTGACGACTTCTCCATTGACGACGACAAGCCTTTAATGTTCTTCAGGCAAAAGTCATTGAGCTTAAAGAAAGATGCGTCTATTAAGCaaagaaaaatcaataacaaacGCCCAAAGTCAGttaaaaacTCCGAGCCAAAACCTAGAAATAAGACTAAATTTGTACGACCTGGTCTAAATCTGCAAGGTAAAGATGCAGTGAAACGTAGCCCGCCGTGTTTAGATCAAAGCGCGGGACAAGGACCAGCGTGCACTACCAATGTAAACCCTATGCCGGGGCTAGCGtcttccaataaaaatattagtcctATGCTAGAAGCGACGCCTTCCCATAAAGATGCTATCACCCTATCAGAAACTTCACCGGCTAGTACCAAAACTAACCCTGCTCCTGGTCTGCTATCACGCATACCATCACAAAATAAAGAGGAGGAACAAAATCTTGGACCAtcgttatcaaataaaaacgtgGACTTTGTTCCTGGGGCACCAACCCCAAGTGTGAATGCGAATCTTATTAAAGTGCTGTCAACGTCAAATTTGATAGTTGACGCGAATGGTAGACCAGCATTCGCTGGTATGAACTTTGACACGAGCACCGGTCAAGCGCCAGACAAAATAGACGTGAGCCCTTACCCGTGGCCCGCCTCCCACATGAACATGGAAACTATTCCTGTACAATTGTTCCCCAATGGAAACATGGGCCCCATCCCGGCTACATCCCCAGCCGGTATCAATGTGAACCCCATAGCGGGACCACAGTCACAGATATACCTGGTGAATGTACCGGGTTCGTCATCAAACATCCACGTGGTCCCCGTCCCCGGTGCATCGACTTTTGCGTATGCGACCCCCGTCCCAGCACCGACATCTACGAATATATACGTAGACAGTATCCCAGGGCCATCGTCATTGAACATATACAAAGATCCTGTACCGGGGCCGTCATGCACGGGCGTGTATGCTGTCACTACTTCAACCCCATCCGCAAATATTTGTTCAGACAAAGACCGAGGCCCTTCAtcctcaaatatttttacgggCAATGTCTCTCAGCCGTCATCCTCAATGCTATGCGCAACGTCTGGTTCATTGCCATCATGCCAAAACACGCGCCCAGCACTAGCATCAAGTTGTTCATCTCCGAACGCATCCACAGCCTCCGTTGCCAGTTCGCCGTCCTCAAATCAAGTGCCGGCAACTTCTTCGTCAGACATTTATTCGAATCCCGTCCCAGGAACTTCCGGTTCCAGTGTATGTTCAGATCCCATCCCGAGTACGTCCTCAAACGGACGTAATAGACGGACCATAGGAAAGCAGAGACGGAAGTCGTCTATGAAGTCCGGTTCATCATCGACAAAGAAACAACCAATCGCGCTAAAAGCACCATTCTATGGAATAAAAAGGATCGAGAACTGGTTGTCATCAGATTTTAGAGTGGTCACTGCCCCACCACCACCGCCACCACCTATGAAGAAATCCAACAACCCAACAGAGGCCAGAGAAGAAACGATGTCCCCAGAACCTGAAATTGACGACACGGAGCAATGTATCGGGGCGAAATTTTCAACTATAAAAGACATCATAAACTACGGGCCAAGCTATTTCGATTGCCTGTGTCTGCAATGTGACCAttgcaattatatttacaaaatgttgaACAAGTATAAACAAGAGTTCAGTACAAACAGGAATGTAGACGTCGGGATGAGGAAGCGGAAACACGAGGAATCCTTGGCTGTGGATCGAGAAGACACGTCAGATGCCATGGTGATCGAGGTTTCAGACAGTGAGGATATAAAGACTATCGACCTTACCGGTGACAACGATGATCTCATGCAAGACAATGAAGCGACCAACTGCTCGCCCAAACCTGCTAACAGCAGCAACCCGCAGCCAGAGAATGTCAGGCAGCAGAATGAGACACAGCGCGAGTCACAAGGTGAGAGGTCGCAGAATCATACAGCAAGGAATCTAGCGCAGCGGAACCAAAGGCGGCTTCAACAGAGGCAGAGGCAGCGGGTCGGCCGACAGGCGGGTTCCTCGCTACGTGGCCGGCAGAGAATTGTGCCTAAGGCAGCCCAGCGGCCATTGAGGCGGGTTGCTGTCAATAAGGTTGTAAACCGGAGGTCGCTAACGAGATACTCCTACCAGACGAGCAAGCGCTCTGATAACGTGTCCAGAATACTACGAGATAAGATCATCACCGCTCCCGTGTTCTATCCGACTCTAGAAGAATTTtcgGATCCCATGGCCTATTTAGAGAAGATAATGAAATTTACGAAGAAATACGGTATCTTCAAACTAGTGGCGCCAGACGAGTATGAACCTACGTGTACTATATCCGAGAACTTTAAATTCAGTACATCCCATCAATACATAGCTCGGTTCTTCAATCGCTGGGGTCCCGCTGCCAGAGAACTGTGTACTATGAGGGCTTATTTAGCTACACAGAACGTTCATTTCAAACGTGGGCCTTtgctAGGCGGTCTAGAGGTTGATCTGCCCAAAGTGTTCCATATCGTCCAAAGACTGGGCGGCTTAAAGACTGTCATGGATAAAAAGAAATGGCATCGCATAGCCGAAGAATTGAACCTCAGAAACCTGCGTAACCCAGAGAAGaagtttgataatttattcctAAAGTACTTATTGCCATACAACAGTCTGACTAAAAGAGAACGGCAGGACATGATGATGAAGGTGGAACAGAGGTGGATCAAGAAGAACAATAGACTGATGAAGCGTGTCGTGAACCCGTTGTACCGGCAGAAACGTATGCTGGGAGAGCTTGAGTCGTCCGACGAGGAAGCTGAAGACGAGGACTACCTCACGGAGGCGCTCAACCTCGCTGAAGACTGTAGCCAACTGGGACGGAAGATGGGACTCGAAGCATTCAAGAAGATTGCCGGAACCGCATTCAATATGTACTTCCCCGATGAGAAGGCTCAGCCTACAGTGGCTGAGATCGAGGAGAAGTATTGGAACATTGTGCTGCTAGGAACCCAGCATGTGTCCGTGAACACGGCATTCATAGAAAGCGGCGTAGAAGGAAACATCCCACCTAAGAGTAAGACGAATGATGCGATCAATACGAACCCCTGGTACTTGAAGAATCTGAGTACCGACAAGAGTAATGTCCTCCGTTTACTCGGCTCATTGGCTGGTATGACAGTGCCGTCACTGCACGTGGGCATGGTGTTTTCAACCAGCTGTTGGCACCGCGACCCTCACGGGTTGCCGTGGATGGATTACTTGCACCAAGGAACAGAGAAGATATGGTATGGAGTCCCCAGCCACGAAGGGCAGAACTTCCGCTGCGCCCTAGAAACTCTCTGTCCAACTCTGTGCCAGAACAAAACATTGTGGCTGCCCTCCGAGATCGCAATGACACCGCTCAACCTCCTGTTAGACCGTAACATCAAACTGACACGCTGCGTACAGCGGCCGGGCGAATTCGTGTTCGTGAACCCCCAGGCGTACTCTAGTTCGGTGTCAACCGACTTCACAGTTTCGGAGAGCGTTTACTTCGCTACTGAGTCCTATTTCGAAAACGTCAATCAGGCCTTCCAGGAGTTGAAGGAAAGCTGCGAGCCGTCGTCGTTTTCGTTGGAACAGCTGCTGATATCAGCGGCCAAGGACCCGCAGCTACCATCGAACGTTCTGGAACACGTCAACAAACATCTCAATGACATAGTGTCCGAAGAGCTCTCCTTCAGGAGGGCACTCACCGATCTCAAAGTACCGCTGCTGGTTAATAAAAACCGTCCGACAATATGGAGTGCCCGTGACGACGATGAGTGCCAAGTCTGCAGGACGGCGTTGTATTTGTCACGTGTAAGtggaactttattttatacatacagagacgaaacctctcagcattccatgggtTCAGATTTGTTGCTGGTAGAGGAGCTTCAATGGTGCCTCAGAATTGCGACCCAGGTGCTTAAAGGGCTCCAATCTAAGGCTCacctcctctctctacctaacatataa
Protein Sequence
MKTKVQAQRKFAQGAYVPPALNVSGGGIDRRTEISPIKEKSVFHNKTSARSLLDIVAFKNLHKHAQPIVLLERLENSHNLCSKDRANPIALAKPSGVTINKTNHELIPPMSNGTHGSPVSRDRTRNARVITPRLPMHLRSRVVTYGERKKVLVTKKKNFENREKNIVKIRNSRELRKKKRPDNYSDDFSIDDDKPLMFFRQKSLSLKKDASIKQRKINNKRPKSVKNSEPKPRNKTKFVRPGLNLQGKDAVKRSPPCLDQSAGQGPACTTNVNPMPGLASSNKNISPMLEATPSHKDAITLSETSPASTKTNPAPGLLSRIPSQNKEEEQNLGPSLSNKNVDFVPGAPTPSVNANLIKVLSTSNLIVDANGRPAFAGMNFDTSTGQAPDKIDVSPYPWPASHMNMETIPVQLFPNGNMGPIPATSPAGINVNPIAGPQSQIYLVNVPGSSSNIHVVPVPGASTFAYATPVPAPTSTNIYVDSIPGPSSLNIYKDPVPGPSCTGVYAVTTSTPSANICSDKDRGPSSSNIFTGNVSQPSSSMLCATSGSLPSCQNTRPALASSCSSPNASTASVASSPSSNQVPATSSSDIYSNPVPGTSGSSVCSDPIPSTSSNGRNRRTIGKQRRKSSMKSGSSSTKKQPIALKAPFYGIKRIENWLSSDFRVVTAPPPPPPPMKKSNNPTEAREETMSPEPEIDDTEQCIGAKFSTIKDIINYGPSYFDCLCLQCDHCNYIYKMLNKYKQEFSTNRNVDVGMRKRKHEESLAVDREDTSDAMVIEVSDSEDIKTIDLTGDNDDLMQDNEATNCSPKPANSSNPQPENVRQQNETQRESQGERSQNHTARNLAQRNQRRLQQRQRQRVGRQAGSSLRGRQRIVPKAAQRPLRRVAVNKVVNRRSLTRYSYQTSKRSDNVSRILRDKIITAPVFYPTLEEFSDPMAYLEKIMKFTKKYGIFKLVAPDEYEPTCTISENFKFSTSHQYIARFFNRWGPAARELCTMRAYLATQNVHFKRGPLLGGLEVDLPKVFHIVQRLGGLKTVMDKKKWHRIAEELNLRNLRNPEKKFDNLFLKYLLPYNSLTKRERQDMMMKVEQRWIKKNNRLMKRVVNPLYRQKRMLGELESSDEEAEDEDYLTEALNLAEDCSQLGRKMGLEAFKKIAGTAFNMYFPDEKAQPTVAEIEEKYWNIVLLGTQHVSVNTAFIESGVEGNIPPKSKTNDAINTNPWYLKNLSTDKSNVLRLLGSLAGMTVPSLHVGMVFSTSCWHRDPHGLPWMDYLHQGTEKIWYGVPSHEGQNFRCALETLCPTLCQNKTLWLPSEIAMTPLNLLLDRNIKLTRCVQRPGEFVFVNPQAYSSSVSTDFTVSESVYFATESYFENVNQAFQELKESCEPSSFSLEQLLISAAKDPQLPSNVLEHVNKHLNDIVSEELSFRRALTDLKVPLLVNKNRPTIWSARDDDECQVCRTALYLSRVSGTLFYTYRDETSQHSMGSDLLLVEELQWCLRIATQVLKGLQSKAHLLSLPNI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00421134;
90% Identity
-
80% Identity
-