Dere015579.1
Basic Information
- Insect
- Danaus eresimus
- Gene Symbol
- nfxl1_1
- Assembly
- GCA_018231745.1
- Location
- DVQP01014330.1:555-3029[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 2 2.9e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 19 0.01 1.5e+02 3.2 0.3 4 10 169 175 168 176 0.97 3 19 3.1e-07 0.0046 17.6 15.9 3 19 186 202 185 202 0.95 4 19 8e-06 0.12 13.1 12.8 1 18 237 254 237 255 0.93 5 19 1.3e-06 0.02 15.6 9.9 1 19 290 308 290 308 0.98 6 19 2.4e-06 0.035 14.8 18.0 3 19 345 361 344 361 0.93 7 19 2 2.9e+04 -5.3 2.2 5 10 384 389 384 389 0.88 8 19 0.012 1.7e+02 3.0 17.8 1 18 395 412 395 413 0.97 9 19 1.4e-08 0.00021 21.9 17.3 1 19 422 440 422 440 0.99 10 19 0.54 8e+03 -2.3 1.0 5 10 468 473 468 473 0.91 11 19 0.0002 3 8.6 4.9 9 19 488 498 486 498 0.89 12 19 1.7 2.5e+04 -3.9 8.4 3 12 509 518 508 518 0.89 13 19 0.44 6.5e+03 -2.0 3.2 15 18 548 551 547 552 0.84 14 19 0.25 3.7e+03 -1.2 0.5 8 12 568 572 567 579 0.78 15 19 1.6e-05 0.23 12.2 5.8 1 11 588 598 588 599 0.97 16 19 0.8 1.2e+04 -2.8 1.3 15 18 613 616 612 617 0.84 17 19 4.9e-05 0.72 10.6 15.9 3 18 629 645 628 646 0.84 18 19 2 2.9e+04 -6.5 3.4 9 13 652 656 652 656 0.71 19 19 8e-07 0.012 16.3 11.3 1 16 687 701 687 707 0.87
Sequence Information
- Coding Sequence
- ATGGCTCGAAGATATCGTGATGCCGCTGCTAAATTGCAGCAAAGTGTTCAAAAACATCTCCAGGGAATGAAAGAGTTGTCTTCCTCTGAAGATGATGAACCTTTCGAGCCAACTGTACTAGATGGAGTATTTCAAAGCTACTGTAAAGGCGGCGGTGATACTCAGTTACTCAACAGAACTAAGAACCTTCTAGAAGAAGCTATTAGTGGTCGATCGATCACTTGCTTAATTTGTATAAGTTCAATTAAACGTGCCGATGCTATCTGGACGTGTGACCATTGTTACTCTTACTTCCATTTATCCTGTATACAGAAATGGGCTAATGATAGCATCAGTTTACGCAGTGAAGAAAATCAAGGACCAGTTACAGTTTTGTTACCCAAGAAAGTAGAATGGTGCTGTCCAAAATGCAGATactcatataataaacaacaaataccTCATAAGTACCGTTGTTATTGTGGTAAAACTGATGACCCTCCTTTACACCCCTGGCTGATACCTCACACATGTGGAGAGGTATGTGGGAAATTCTTATCAGTTGGAAATAACTGTAAACATAAATGTCTTCTTCTTTGCCATCCTGGCCCTTGCCCACCATGTCCGCAAACTGTAAATGGTGCTTGTTACTGTGGAAAAGAAGTGAAACGAATTAGGTGTAGTGCCAGTAAATGGTCTTGCAGACAACTATGTAAGAAGATATTGCCTTGTAATACTCATAAATGCGAAATAGAATGCCACGATGGTGAGTGCCCACAATGCAATTATACAAGCTTGCAAAGTTGTCAATGTGGAGCTGAAAAGACAAAGCGGCCATGTGATGATTTAGTATGGCATTGTAAGAAACAATGTAACCGACCGTTTGATTGCGGATACCATGTGTGTGAGAAAATTTGTCATTCAAGTGATTGTGGAGACTGTCCCAATTCTGGAGTAAAATCCTGCCCCTGTGGCGCAAaccaaaaatttatacaatgtcCTGACACAATTGAAACATGTGTAGGTACATGTAATAAGAAACATGAAAATTGTGAGCACAACTGTCCAAATAAATGCCACAAGGGGCCATGTCCACCTTGCCAAGTTGTAATTGAAAAGAAATGCCAGTGTTCAACCCATACAAGGTCTTTACCTTGttacaaagaatttaaatgtgaaacaAAATGTAGAGGCATTAGGCCCTGCGGTAAACATGGTTGCGGCAGAAAATGCTGCAACATGAACTGTCCGCCTTGTGAAAAGATATGTGACAAACCTTTGCAATGCGGGCGTCACAAATGTACAACAGTTTGTCATCACGGCCCTTGCTATCCTTGTCCACTTGAATCAAAAGTGTACTGTCGTTGTAAAGAAACATACATTACTGTACCATGTGGTAGAGAAAGGTATACAAAACCACCAAAATGCAGTCGAccatgtaaaattaaatataaatgtgggCATATTGATGAGAACAAACATAAATGTCACTTCGGGGACTGTCCGTCGTGTAAGGcagtttgtaataaacaatatgaaaaatgcGAACACCAGTGTGTAACAACTTGTCATGAAAATGTGTCAGTTGTGTTTAAACAAGTTGAAAAACCAGCAACTCCGTGGGAGGTACAGCCCCCGAAGACGAAAATAGTAGCTTTGAAATGTCCCCCTTGTGAGGCACCGGTGATGGTTACATGCTTTGGTGAGCATGAAACAGATAGCCAACCATGTCACACTGCCTCAAGGAAGCCGTGTGGAAGGCAATGTGGTCGTCCATTAGCATGTGGAAACCATAAGTGCGAATTATCCTGTCATTTGTATGAGTCGGATGTAGATTATCCAAATGTACCATATACATGCAAACCATGTAACAGAGAATGCTTGGTAGTCCGTCCACCTAAATGTACACACAAGTGTGCGAAACAGGCCTGTCATCCCGGACCTTGTCCGCCATGTAATATACTAGAAAGGATACCCTGTCATTGCGGTGTAACTGAAATATATGTGAGATGTCGTGAGTTACAGAGTGCTACGGACGAAATGCTAAGCTGCAAACAACAATGCCCTAAGAGCCTAGAATGTGGCCATAGGTGTAAAAACCTGTGTCATTCTGGTAGCTGTGGGCAGAATCAAGTATGCAacaagaaaactaaaatacacTGCCCATGCGgaaatttaaagaaagaaGCAGCTTGCAAAGCCGTAAGGAATTTGGAGGTGCAGGTCCTTTGTGACGAGAGCTGTGAAGCCAAAAAAGTTGCTGCCCAATTAGAAAAAGAGAAAGAGGCGAAAAGACTCAAAGAATTAGAAGAAGAACGGAATCGTAGAGAGTTAGAAGAATACACTTGGAAATTAAGTGgcaaaaagaagaaatataaagagaagAAGATTGTCGTTGTTACTGATAACAGGAACTGGTTTCAGAAGTATTGGTTTCCTGTTTTGTGTGTTTTGGTTGGTGTGTTGTccgctatttattatatattcaatgtttga
- Protein Sequence
- MARRYRDAAAKLQQSVQKHLQGMKELSSSEDDEPFEPTVLDGVFQSYCKGGGDTQLLNRTKNLLEEAISGRSITCLICISSIKRADAIWTCDHCYSYFHLSCIQKWANDSISLRSEENQGPVTVLLPKKVEWCCPKCRYSYNKQQIPHKYRCYCGKTDDPPLHPWLIPHTCGEVCGKFLSVGNNCKHKCLLLCHPGPCPPCPQTVNGACYCGKEVKRIRCSASKWSCRQLCKKILPCNTHKCEIECHDGECPQCNYTSLQSCQCGAEKTKRPCDDLVWHCKKQCNRPFDCGYHVCEKICHSSDCGDCPNSGVKSCPCGANQKFIQCPDTIETCVGTCNKKHENCEHNCPNKCHKGPCPPCQVVIEKKCQCSTHTRSLPCYKEFKCETKCRGIRPCGKHGCGRKCCNMNCPPCEKICDKPLQCGRHKCTTVCHHGPCYPCPLESKVYCRCKETYITVPCGRERYTKPPKCSRPCKIKYKCGHIDENKHKCHFGDCPSCKAVCNKQYEKCEHQCVTTCHENVSVVFKQVEKPATPWEVQPPKTKIVALKCPPCEAPVMVTCFGEHETDSQPCHTASRKPCGRQCGRPLACGNHKCELSCHLYESDVDYPNVPYTCKPCNRECLVVRPPKCTHKCAKQACHPGPCPPCNILERIPCHCGVTEIYVRCRELQSATDEMLSCKQQCPKSLECGHRCKNLCHSGSCGQNQVCNKKTKIHCPCGNLKKEAACKAVRNLEVQVLCDESCEAKKVAAQLEKEKEAKRLKELEEERNRRELEEYTWKLSGKKKKYKEKKIVVVTDNRNWFQKYWFPVLCVLVGVLSAIYYIFNV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01035137;
- 90% Identity
- iTF_00421034; iTF_00421870; iTF_00419473;
- 80% Identity
- -