Dere017076.1
Basic Information
- Insect
- Danaus eresimus
- Gene Symbol
- -
- Assembly
- GCA_018231745.1
- Location
- DVQP01016935.1:1264-4032[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.1e-12 1.1e-08 35.4 0.0 4 35 37 69 34 74 0.92
Sequence Information
- Coding Sequence
- GCAAAGCTGCTTGAGAATTCTCACGCTTGGCTCGGCGCCTCCACATCTTCGATCGCAGAATTCCATGGTCATACCCTCAAGCTGAAGGCACCCACGTGGACGCAGAGCCAACTGCAAGAGGCTATACAAGCTGTCGTAACCCAGAAAATGAGATTCACTCAAGCCGCCACACACTATGGAATACCTAAAGGGACTCTGTACGATAATATACTTGGGAAATCTAAAAGGATGGCCGTTTTagacgacgccgggcttttAGCTAGCGAGGAGAGGGCCGTGTTGGACTTCTGTTGCGAAACAAGTGTCTCACCTTACAACAGACGTACTAAGAAATCGCTGGCCGAAGTTCTCACTTATGTTGAGAAACTAAGACAAGGTAGAGACCCCGGCTTCGCTTTCATAGGTCTGACAGGGTTCCGTTGGTGGTGGGCGTTCTGTAAGAAACATTCCATTGTATCGCTGCATTACGAAGGATCTGTTAAACCTAAAAGTTCCAAAgcaaaaaatgaaaacaacgATAAAGATGAAACATGA
- Protein Sequence
- AKLLENSHAWLGASTSSIAEFHGHTLKLKAPTWTQSQLQEAIQAVVTQKMRFTQAATHYGIPKGTLYDNILGKSKRMAVLDDAGLLASEERAVLDFCCETSVSPYNRRTKKSLAEVLTYVEKLRQGRDPGFAFIGLTGFRWWWAFCKKHSIVSLHYEGSVKPKSSKAKNENNDKDET
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00025190;
- 90% Identity
- iTF_00418898;
- 80% Identity
- -